Oreochromis aureus (blue tilapia): 116312796
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Entry
116312796 CDS
T07295
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1 isoform X1
KO
K09335
visual system homeobox protein 1
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116312796 (vsx1)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116312796 (vsx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116312796
NCBI-ProteinID:
XP_031586137
Ensembl:
ENSOABG00000006839
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Position
LG13:34840671..34844438
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AA seq
364 aa
AA seq
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MTGREELSEEKPRVKLLSPGFGIDKSRLHGPGLRSKGFAITDLLGLETDLQARQQTGGAP
GASGPGAEQHGAGPGLGGFSFPGGSLPLGLGFLCSLAAQQPAGAPCFLPGHLPLLQARPD
SHYLQNLEAQREAYSDEECLSDRNDSKTCGNSQKRKKRRHRTVFTSHQLEELEKAFQEAH
YPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIP
LPESILNSAKNGMMGSCAPWLLGEPHARMHKKSLEMSKKCSSPPASDSTRSDSFCNASER
QGSGEAREPEEDELMEEEEDEVEEEVAIDLSSSSKQQQQEEGGASIRTASSPRQQSCSES
DEHS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcgggaggagctcagcgaggagaagccgcgggtgaagctgctgtccccgggt
ttcggcatcgacaagagccgcctgcacggccccgggctccgctccaaaggcttcgccatc
accgacctgctgggcctggagacggacctgcaggcccggcagcagaccggcggggcccca
ggcgcctcggggcccggggcggagcagcacggggccggacccggcctcggcgggttctcc
ttcccgggggggtcgctgccccttggcctcggcttcctatgcagcctggcggcgcagcag
cccgccggggcgccgtgcttcctgcccggacacctgccgctgctgcaggcccggcccgac
agccactacctgcagaacctggaggcccagcgggaggcctactccgatgaagagtgtctg
tcggaccgaaacgactccaaaacctgcggaaactctcagaagaggaagaagaggagacac
cggacggtgttcacctcccaccagctggaggagctggagaaggccttccaggaggctcat
taccctgacgtgtacgcccgggagatgctggccatgaagacggagctgcccgaggacagg
atacaggtgtggtttcagaaccggcgggccaagtggcgtaagcgtgagaagtgctggggt
cgcagcagcgtcatggcggagtatggtttgtacggcgccatggtgcgacactccatcccg
ctgcccgagtccatcctcaactccgccaagaacggcatgatgggatcgtgcgccccctgg
ctgctcggtgagccgcatgcacggatgcacaagaagtctttggaaatgtccaaaaagtgt
tccagccctccggcgtccgactcgacgcgctccgattcgttctgcaacgcctcggaacga
caaggttctggcgaggcccgggagccagaggaggacgagctgatggaggaggaagaggac
gaggtggaggaggaggtggctattgacctgtccagctcatctaaacagcagcagcaggag
gagggcggagcctcaataagaaccgcctcttcaccacgacaacaaagctgcagcgaatca
gacgaacatagctga
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integrated database retrieval system
