Oreochromis aureus (blue tilapia): 116312808
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Entry
116312808 CDS
T07295
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04010
MAPK signaling pathway
oau04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116312808 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116312808 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116312808 (nfkb2)
Transcription factors [BR:
oau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116312808 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
116312808
NCBI-ProteinID:
XP_039477560
Ensembl:
ENSOABG00000008144
LinkDB
All DBs
Position
LG13:34586258..34606564
Genome browser
AA seq
900 aa
AA seq
DB search
MAGALRMTEAQFITYEHELQQFMPYDYIPVDIKTEPFMPETAHGPYIQIIEEPKQRGFRF
RYECEGPSHGGLPGASSEKNKRTYPTVRINNYVGLARVEVQLVTHTDPPRVHAHSLVGRH
CIENGTCTIDIGPNDLTASFSNLGILHVTKKGVVEVLTRRLREEKKRLKGAHCHLTDVEE
SAIVKEAKELGKTMDLNIVRLKFTAYLQDSTGAFTRALKPVVSNPIYDSKSPNASNLKIS
RMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDEDGCWEAFGDFSPTDVHKQYAIVFK
TPAYHSTEIERPVTVFLQLRRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLPHYEHWR
GGRGGGGAGGFGGSGGGGFQFHQEMNGAGGGAGTGGFFNVSFPGFGNGGGAQMSGSAPRS
GAAQQQQQSDRQSGGQSDSPLRQQLLQIAAALNSRVSQSARQTAAALLQYCSTGDARVLL
AIQRHLCGIQDGNGDTPLHLAIIHHQTGVIQQLIHTLLSSQQQGIINTANHLQQTPLHLA
VITRQVKVVEVLLKAGADPSLVDKDGRTPLHLAALAGDHNILRFLLAHLGECHAHLVNMP
DFHGLHPLHLAVRRDGERCLRLLVEGGAKINEPEQKSGNTALHLAVRENLFKVACLLITE
LRADVNACTFGGNTPLHLAASLGSPTFCSMLIAAGADKSIENDEPLFFSSSSSDDEDEPI
REEEKEREVAPKTSNPRKRPAGGHTPLDLAKCQKVRKVLSPSKSPKSDRRGSGNIRPTTS
STEEAERVGLDEDTLSRLVDVLSVGDVPWKKLAEKLGMMTLTHLYQDSPMPCRQLLHHYK
LGGGAVEGLVEALHSLGLTEGVRLLRNAELRDDKHNTDVTVDSGFGSQPMEDVEPPAGVQ
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccctgcggatgactgaagcccagttcatcacctacgagcacgaactgcag
cagttcatgccgtacgactatattccagtggacataaagacagagcccttcatgcctgag
acagctcacggcccgtacattcagatcatcgaagagcccaaacagaggggatttcgtttc
cgttacgagtgcgagggtccatcacacggcgggctcccgggggcctccagcgagaagaac
aagagaacgtaccccacagtgaggatcaataactatgtgggtctggcccgagtcgaagtc
cagctggtaacgcacaccgaccctcctcgcgtccacgcccacagtctggttggacgccac
tgcatcgaaaacggcacctgcaccatcgacatcggccccaacgacctcactgcctcgttc
agtaacctggggatcctccatgtgaccaagaagggtgtggttgaagttctgacccggagg
ctgagagaagagaagaagcggctcaaaggagcgcactgtcacctgacagatgtcgaggag
tcagccatcgtgaaggaggccaaggagctggggaagacgatggacctgaacatcgtcagg
ttaaagttcaccgcctacctgcaggacagcaccggcgccttcaccagagcactgaagccc
gtcgtctccaaccccatctacgacagcaagtctccgaacgcctccaacctgaagatctcc
cgcatggataagacgtgcggctcggtgctcggaggagacgagatcttcttgctctgcgac
aaagtccagaaagatgacatcgagatccggttttacgaggaggatgaggatggatgctgg
gaggcgtttggggacttctcacctacggacgtccacaaacagtacgccatcgtgttcaaa
acgccggcctatcacagcacagagatcgagcggcccgtcaccgtcttcctgcagctgagg
aggaagaaggcgggcgacagcagcgaccccaaacagttcacctacatccctcaagtccaa
gacaaagaggaggtgctgaggaagaagcagaagccgctgcctcactacgagcactggaga
ggaggaagaggaggaggaggagccgggggatttggtggatcaggaggaggaggatttcag
ttccaccaggagatgaacggagcagggggaggagcaggaacgggaggcttttttaatgtc
tctttccctggcttcggtaatgggggaggggctcagatgtcaggctccgcccctcggtca
ggtgctgcccagcagcagcagcagagcgacagacagtcgggaggacagagcgactcgccg
ctccgtcagcagctgcttcagatcgccgccgccctcaacagcagagtctctcagagcgcc
cggcagaccgccgctgccctgctgcagtactgcagcaccggagacgctcgcgtcctcctc
gccatccagagacacctgtgtggcatccaagatggaaacggagacacacctttacacctg
gccatcatccatcatcagacaggtgtgatccagcagctgatccacactctgctcagcagc
cagcagcaaggcatcatcaacacagccaaccacctccagcagactcccctgcacctggcg
gtgatcacacggcaggtgaaggtggtggaggtgctgctgaaggcgggggccgaccccagc
ctggtggacaaagatgggcgcacccccctccacctcgcggcgctggctggggaccacaac
attcttcgcttcctgctggctcacctgggagaatgccacgcccacctggtcaacatgccc
gatttccatggtctccacccactccacctggctgtgaggagggacggcgagcgctgcctg
cgtctgctagtggagggcggagccaaaataaacgagcctgagcagaagagcgggaacacc
gccctccacctggccgtcagagaaaacctgttcaaggtggcctgcctactcatcaccgag
ctccgagctgacgttaacgcctgcacatttggaggaaacacgccgctccacctggccgcc
agcctcggctcgccgaccttctgctccatgctcatcgctgcaggtgctgataagtccatt
gagaacgatgagccgctcttcttcagctcctcgtcctcagatgatgaagatgaaccaatc
agagaagaagagaaagagcgagaggtcgccccaaagacatccaacccccgcaagagacct
gcgggaggccacacccccctggacctggctaaatgccaaaaggtcaggaaagtgttgtcg
ccctctaagagtccgaagtcggatcgccgcggcagcgggaacatcagaccgacaaccagc
agcactgaagaggccgagcgcgtggggctcgacgaggacacgctgtcacggctcgtggac
gtgctgagcgtcggcgacgtcccctggaagaaactggcggagaagctgggcatgatgacg
ctgactcacctgtaccaggacagtcccatgccctgccgccagctgctgcaccactacaag
ctgggtggaggtgcagtcgaaggcctggttgaagctctgcactctctgggtctgacagaa
ggagtccgactgctgaggaacgccgagctccgagacgacaaacacaacacagacgtcacg
gtcgacagcggcttcggcagccaaccaatggaggacgtggagccgcccgcgggcgtgcag
tga
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