Oreochromis aureus (blue tilapia): 116312963
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Entry
116312963 CDS
T07295
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04136
Autophagy - other
oau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116312963 (atg4b)
04136 Autophagy - other
116312963 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oau01002
]
116312963 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116312963 (atg4b)
03029 Mitochondrial biogenesis [BR:
oau03029
]
116312963 (atg4b)
Peptidases and inhibitors [BR:
oau01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
116312963 (atg4b)
Membrane trafficking [BR:
oau04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
116312963 (atg4b)
Mitochondrial biogenesis [BR:
oau03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116312963 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
116312963
NCBI-ProteinID:
XP_031586360
Ensembl:
ENSOABG00000017203
LinkDB
All DBs
Position
LG23:32611326..32620533
Genome browser
AA seq
391 aa
AA seq
DB search
MDAATLTYDTLRFVEFEDFPETSEPVWILGKEYNALTEKDEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLGRDWRWAKGQKQREEYISLLNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSKVVVHVAMDNTVVIEEIK
RLCMPWLDACGESEGVGELNGCLEGACAMAEEETALWRPLVLLIPLRLGLSDINDAYIET
LKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPSEDSQVPDETYHCQ
HPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRIRRLSCNRGTLPMFELVDSQPSHMVSV
DTLNLTPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctaccttgacatacgacacacttcgctttgttgagtttgaagattttcct
gagacctcagagcctgtgtggatcttgggtaaagaatacaatgcactcacagagaaagat
gagattttatcagatgtcacttcacggctgtggttcacatacagaaaaaacttcccaccg
attggggggaccggaccaacatcagacacggggtggggatgtatgttacggtgtggccag
atgattctgggcgaggccttggtgtgcagacatttaggaagagattggagatgggccaaa
ggccagaaacaaagagaggagtacatcagtcttctcaacgccttcatcgacaaaaaagac
agctattattccatccatcaaattgctcaaatgggagttggagagggaaagcctattggc
cagtggtatggaccaaacacagttgcccaggttctaaagaagctggcggtgtttgatacg
tggagcaaagtagttgtacacgtggcgatggacaacactgtggtcatcgaggagatcaag
cgcctttgcatgccctggctggatgcctgtggagaatcggagggagttggggagcttaat
ggatgcctggagggagcatgtgccatggctgaggaggagacggcgctctggagacctctg
gtactgctcatccccctcaggctgggcctgagcgatataaatgatgcctacattgaaacc
ctcaagcaatgcttcatgctgcctcagtcccttggtgttattgggggaaaacccaacagt
gcccattacttcattggttatgtcggagaagaactcatctatttagacccacacaccaca
cagcctgcagtggagccgtctgaagacagtcaggtccccgatgagacttaccactgccag
cacccaccctgtcgcatgcacatctgtgaactggacccatccatcgcagcgggtttcttc
tgcagaacagaggatgagtttgatgactggtgtatgcgcataagaaggctgtcctgcaac
agagggaccctgcctatgttcgaactcgtagacagccagccctctcatatggtcagcgtg
gacacccttaaccttactcctgatttctcagactcggacaggttggagcggttcttcgat
tcagaggacgaggagtttgaaatcctttccctgtga
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