Oreochromis aureus (blue tilapia): 116313494
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Entry
116313494 CDS
T07295
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116313494
Membrane trafficking [BR:
oau04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116313494
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
116313494
NCBI-ProteinID:
XP_039458247
Ensembl:
ENSOABG00000011016
LinkDB
All DBs
Position
LG1:7921209..8103767
Genome browser
AA seq
1982 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSAGEEVP
PGFTCIETTPTGQSADLNNGALMAPQILLCYRRGCDKPPLTDLGVLYEWKERLKQGCHLI
QTTPSGRPANISGNSSQRIYITYRRAPESQPHAALAVTDVCIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPQECLTDQQVSQLGLQNPDPHK
PSPSSSMAAGTSSTANGSPCSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHALPI
EKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLHNLGPENA
VTLLVFAVTEHKILIHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCP
FIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHHEDKRALTWKILPKKACKNLMNVLNNLYQ
QLVDGQYRADGLLELSMSDSSELSCGKSLHTLELEIQEAFLRFMAAILKGYRSFLRPITQ
APSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFD
DCVDKLYNSERGADKGGKVDSDRPEETRLIEIDESQRSEHTVFITPPELPPLPEGEEHPL
CYRYDGFPVLSLDLFDPVEGLRTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKKYS
SIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVCYR
VLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWMKL
RNVILGVAQFKRALRRHAGLTQSPLSDGSDLDALSHGSLDSSADTNLVEQGPYAADSVKV
DPTDDRSSTGDQSDLGYNSLSKEEVRRGEPAGQDSAPDKDDKKESDCSSLSETESAKGSK
DCLPQLDLEMSSSFRPRGIVRSSCPFDDSACKPKSSASADHVAGLLFTTSLDEIGEIQTN
SLLRRHKSALEEVMGSASSGSALDWQGVKSRRLSGDTVGSSGSGTTVLGLGMSQGETDPD
KITGHLGADAKILAGANFTKTRRPHSLALGGLKGVAAKSHAARSSDHREVDEEAERQDSS
DEDRNTTEAIFDLEDLDFEKPSKGAKPYKKPVERSASYGGVSTMTNRGTVKRTGIETGYD
PLSLLAAESDQQNEERYTEGDQASTPSARRHLAREIELYMNHMGSPLSSRMPSLDLQDPA
SPVLLHHSSLSASSRRASLPHSSPLRTAGVPRSRTFQPPSPSQPISRQRLWSSPPSRSSS
TTPSPSPRPSPYRERADRMSLTSPSLSSSSFALDTLLTPTLDVFKTSVFSAGKEVAEKAS
RWYTRLATYTTPTKDSQSDHLSVSSLCAGDPDCSSLLDDEDSGDTEHSMVFPLRNGPVGP
PGPRRSPRRSPLRSHLDSPTAGSSHRRPTSLLPGLPGFSLLDKSDLSSSRYTSNTSIFNN
YAMELLISSCSRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRG
PGRLFLKGSPSVDEAMTSSYSASTGLDTGTSTLSTPCPTTAVSPPSPMIAMQECSARSRS
TRDQGINIPVERRQGALSSGAPIVRSVSAFGPLDETTRHNCCLPTSGSLPSCLNEATDPL
SMEWRLHNPEPVTVPYLSPLVLWKELESLLENEGDSVITEADMVDHHPIIYWNLVWYFRR
LDLPSNLPGLILTSEHCNRDSQIPRHWMSEDSKHVLIQILWDNLKLHQDPIQPLYILWNT
YNVGYPVSRPVPEEEKPFSEELLHSMVKSIQRNDVSRPMAQLLQLLGQTLEVKRQRSLYR
DILFLSLVALGKDNIDIDAFDREYKLAYDRLTPNLVKLTHNCDRPPSTGVMECRRTFGEP
YL
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggccctcgtgtagccgactactttgtggtggccggtctgacggac
ccgtccaagccgttggaccaggagatccactttgatgatgtctgccacaagacggccaag
cctaaggcacccatcacagatgtggcagtggtgatccgctcagcgggggaggaggtgccg
ccagggttcacatgcatagaaacaacaccgacaggccaatcggctgatcttaacaacggc
gccctcatggcgccgcagatcttattgtgctacaggcgaggttgtgacaagccaccgcta
accgacttgggtgtgctgtatgagtggaaggagcgtctaaagcagggttgccaccttatc
caaaccacaccttctggtcgcccagccaacatcagtggtaattcctcccaacgcatctac
atcacctaccgccgggctcccgagagccagccgcacgccgccttggctgtcacagacgtc
tgcatcatcatcccgagcaaaggggagaccccaccacacaccttctgcaaggtggagaag
aatctcaacagcagcatgtggggatcctcagtctacctgtgttacaagaagtctgtggcc
aaaaccaacacaatagcgtacaaagcaggtttattcagcagatatccagaggaggactat
gagtcattccctctgccagagtctgttcctctcttctgccttcccatgggggccacaatt
gagtgctggccagctaacaccaaatactccctccctgttttttccacctttgtcctcacc
ggagcctctggagagaaggtttacggtgctgccattcagttctatgagccctacccacag
gagtgcctgactgatcagcaggtctcccagctgggtctccagaaccctgacccacacaaa
ccctctccctccagctctatggccgctggcaccagcagcaccgcaaacggcagcccgtgc
tcggtctacaccaacaagtgtatctgcctgctctctcactggcccttcttcgacgctttc
cgcaagttcctcacattcctctatcgctactccatctcaggccctcatgccctgcccatt
gagaagcacatctcccacttcatgcacaaagttcccttcccttcctctcagaggcctcgc
atccttgtgcagctttcccctcatgatagcctgatgctgagccagccggtctcttctccg
ttaccgctcagtggtggtcgattttccacactgctccacaaccttgggccagagaacgct
gtcaccttgctggtgtttgctgtcactgaacataagatcctgatccattcactacgaccg
gctgtactgaccagtgttactgaggctctcgtgtctatgatttttccattccactggccc
tgcccgtatattcctctgtgccccctggcgttggctgatgtgttgagtgccccctgtccg
ttcattgtaggcgtggactctcgctactttgatctttatgatccccctccggatgtcagt
tgcgtggacctggacacaaacaccatcttccaccatgaagataagcgagccctcacatgg
aagatcctgccaaagaaagcttgtaaaaacctaatgaatgtgctgaataatctctaccag
cagcttgttgatggtcagtaccgagcagatgggctgctggagctgagcatgagcgattcg
tcagagctgagctgtgggaagagtctccacacactggagctagagatccaggaagccttt
ctgcgcttcatggcagcaattctgaagggctaccgctccttcttgcgccccatcactcaa
gcgccttcagagaaagccacagacgctagctcgctctttgacttgcaagggttcttgaag
agccgcgaccgctctcaccagaaattctactccctaatgacgaagacccagatgttcatc
cgctttatcgaagagtgctcctttgtcagcgacaaagacgccagcctggccttctttgac
gactgtgtggataaactttacaattcagagcggggtgcagataaaggaggcaaggtggac
agcgacaggccggaggagacccggctgatagagattgatgaatcccagcgtagtgagcac
acagtcttcatcacgcctccagagctgcctcctctgcccgagggagaggagcatccacta
tgctacaggtatgatggtttcccagtgttgagtttagatctatttgaccccgtggagggt
ctgcggacgccctcctcccgcctcgctgccaggcacagctgtcccaccagccctgccccc
atgtttagacgcaccaagcaggagatcaaatcagcccagaagattgctaaaaagtactca
tccatccctcagctgtggtctaagtgcctgctgcgtcactgctacggtctgtggttcatc
tgcctgccagcatacgtgaaggtgtgccactccaaggtgcgagcgcttcgcacagcctac
gacgtcctcaggaagatgcaggcgaagaagctacagccccctgatgaggtctgctaccgg
gtgctgatgcagctgtgtggacagtatgggcagcctgtcctggcagtgagggtcctcttt
gagatgaagaaggctggagtccaccccaacgccataacgtatggttactataacaaggca
gtactggagagcacatggccctccagcaccagaggaggatacttcctgtggatgaagcta
agaaatgtcatactgggcgtggcgcagttcaaacgggcgctacgacgacacgcaggcctc
acccagagccctctgtcagatggcagtgacctggacgctctgagtcacggcagcctggat
agctctgccgacactaacctggtcgagcagggcccctacgccgccgactccgtcaaagta
gaccccactgatgatagatctagcacaggtgatcagtcagacttgggttataattccctg
tcaaaagaggaggtgcggagaggagaacccgctggccaggactctgcccctgacaaagac
gacaagaaggagagtgactgcagctccttgtcagagacagaaagtgccaagggaagcaaa
gattgcctccctcagcttgacttggagatgagttcttccttcagaccccgtggcattgtt
cgcagcagctgtccatttgatgactcagcctgtaaacccaagagctccgccagtgcagac
cacgttgcaggtctcctcttcactacctccctggatgagattggtgagattcagacaaac
agtttgctccggagacataagagcgctctggaggaggtgatgggcagcgccagcagtggc
tcagcgcttgactggcagggcgtaaagagccgtcggctgagtggtgacactgtgggcagc
agtgggagtggcaccactgtcctgggcctgggcatgagccagggtgaaactgatccagat
aaaatcacaggacacctgggcgcagatgctaaaatcctcgctggtgccaacttcactaag
actaggaggcctcattctctggctctgggtgggctcaagggggtggctgctaagtcacac
gctgccaggagtagtgatcacagggaagtggatgaggaggcggagcggcaggactccagc
gatgaggacaggaacactacagaggccatttttgatctagaggatttggatttcgaaaag
ccctctaagggggcaaaaccttataaaaaacctgttgaacgcagcgccagctatggtggt
gtgagcaccatgacaaacagaggcactgtgaagcgcacaggtattgaaacaggctacgac
cctctctccctcctggcagcagagtctgatcagcaaaatgaggaacggtacacggagggg
gaccaggccagcactcctagtgcccggaggcacctggccagggagattgagctctacatg
aaccacatgggcagcccgctgagcagccgcatgcccagtctggaccttcaggacccagcc
agccccgtcctcctccaccattcctcactctctgcttcctcccgcagagccagcctcccc
cacagctcccccctcaggactgcaggagtccctcgctcccgcaccttccagccgccgtcg
ccctctcagcccatctcgcgccaacggctgtggtcttcacctccatctcgaagctctagc
accacccccagcccgagtcctcgacccagcccctacagagagagggcggacaggatgagc
ctgacatcaccttcgctctcctcctcctcttttgctttagatacgcttctgacgccaaca
ctggatgtgttcaagaccagcgtgttctctgctgggaaggaagtagcagagaaagcgagc
cgctggtacacgcgccttgccacatacacaacacccaccaaggacagtcagagtgaccat
ttgagcgtgtcctccctctgtgcgggagatccagactgctcctcactgttagatgacgaa
gactctggagacacagagcactcaatggtctttccattgaggaatggccctgttggccct
ccaggacctcgcaggagtcccagacgcagccccctccgcagccatctggacagtcccact
gcaggatcgagccacagaagacccacatctctgctccctggactgcctggcttctctctg
ctagacaagtcggacctcagctcttcacggtacaccagcaacactagcatcttcaacaac
tacgccatggagctgctgatctccagctgttctcgctgtaagacctgcgactgcctagtg
tatgatgaggagatcatggccggctggacagcagatgactccaacctgaacaccacctgc
cccttctgtggaaaccccttcctgccgttcctcaacgtggagatcagggacatgcgagga
cctggcaggctcttcctgaaaggcagcccatcagtagatgaggcgatgacctcgtcatat
tctgcctccacagggttggacacagggacgtccaccttgtctacgccctgtcccacgaca
gctgtctcccctccgtcccctatgattgctatgcaggagtgctcagcaaggtctcggtca
accagggatcaaggcatcaatatacccgtagaacgccggcagggggcgctatcctctgga
gctcctatagtccgcagtgtcagcgcatttggtcctctggatgaaacgacccgacacaac
tgctgtttgccaacatcaggcagtctgcccagttgtctgaacgaagccacggacccactg
agtatggagtggcggcttcacaaccccgagcctgtgacggttccctacctgagcccgctg
gtgctgtggaaggagctggagagtctgctggagaacgagggcgactcagtgatcacagag
gctgacatggtggaccatcaccccatcatctactggaacctggtctggtacttcagacgg
ctggacctgcccagcaacctgccaggtctcatcctcacctctgagcattgcaacagagac
tcccagatccctcgccactggatgtctgaggacagtaaacacgtgttgatccagatcctg
tgggacaacctcaagctgcaccaggaccccatccagcctttgtacatcctctggaacaca
tacaatgttggttaccctgtgtctcggccagtcccagaggaagaaaagccgttcagtgag
gagctgctgcacagtatggtgaagagcatccagaggaacgacgtcagccgcccgatggct
cagctgctacagctgctgggccagacactcgaggtcaaaaggcaaaggagtttgtacagg
gacatcctcttcctgtccttggtggctctgggaaaagataacattgatattgacgccttc
gaccgtgagtacaagttggcgtacgatcgccttacacccaacctggtgaagctgacccac
aactgtgaccgtcctccgagcacaggtgtcatggagtgtcgcaggacttttggagagcct
tacttgtaa
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