Oreochromis aureus (blue tilapia): 116313606
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Entry
116313606 CDS
T07295
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oau03009
]
116313606 (ddx52)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116313606 (ddx52)
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
90S particles
Helicases
116313606 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116313606
NCBI-ProteinID:
XP_039473843
Ensembl:
ENSOABG00000019269
LinkDB
All DBs
Position
LG10
Genome browser
AA seq
679 aa
AA seq
DB search
MDAFELFRKLGVGAKFDLKRFGQDAARFKPVRSHTEEASPDPLSAIDYFATANGAQSWTQ
AQEEEEGREEYEGSEDGDSDIGGKRKRKEEERDVRTKKKKKKTKSNQVEVKAGGELLKET
QGTGITWTSSLDRKIQNLPSDGKEKSSMKRLKHLHQEKVNRIRAQNRINVHGCDIPDPVC
TFEELQSEYRLNPRVLQNLRDAGLSSPTPIQMQAMPLMMHGRELLACAPTGSGKTLAFCL
PLLAQLQQPANQGFRGVIISPTRELASQTYRELLRLSEGVGFRVHIIDKASLAAKKYGPR
SNKKYDILVSTPNRLIFLLKQDPPAIDLSSVEWLIVDESDKLFEDGKTGFREQLATIFLA
CSGPKVRRAFFSATCTADVEQWCRLNLDNLVSVNIGHRNTAVDTVDQQLLFVGTENGKLV
AMRDIIKKGFLPPMLVFVQTIERARELFHELVYEGINVDVIHADRTQQQRDNVVNSFRSG
KIWVLICTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHQGKAVTFFTENDK
PLLRSIANVIKQAGCPVPDYMVGFKKIHSKVKRRLEKKPPKRSTICTTPRFLMKTKGKDQ
KKGNKRAASGEQKGENRAQTTLQKEKEEKKTKGQGLKKGNKTQKEGKEKHKKVSQKTTSE
TSGTKLQKKKGKKTKLKAD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttcgagttgtttcggaaactcggagttggagctaaatttgacctgaagagg
tttggtcaggacgccgctcggtttaagcccgtgaggagtcacacagaagaagcttctccc
gatcctctctctgcgattgattattttgccacagccaatggagcccagagctggacccag
gcacaggaggaagaggagggcagggaagaatatgagggaagtgaagatggagattccgac
ataggaggcaaaagaaagcgcaaagaggaggagagagatgtgaggaccaaaaagaagaag
aaaaagaccaaaagcaaccaagtggaggtgaaagctggcggtgaactgctgaaagagacg
cagggcactggcatcacctggacctcctctttggacagaaagatccaaaaccttccgagt
gatgggaaggagaaatcttcaatgaagaggctgaagcatcttcatcaggaaaaggtcaat
cgtattcgcgcccaaaaccgcataaatgtgcacggctgtgacatacctgaccctgtgtgc
acattcgaggagctgcagtccgagtatcgcctcaacccgcgtgtccttcagaacctcaga
gacgccggactgagttccccaacgccgatacagatgcaggcgatgcccctcatgatgcat
ggtcgggagctgctggcctgcgctcccacgggatctgggaagactttggctttctgtctc
ccactgctcgctcagctgcagcagccagccaatcagggcttcagaggtgtgatcatctcc
ccaaccagagagctggccagccagacctacagagagctgctccgtctgtcagagggagtc
ggatttagagttcacatcatagacaaagcgtcactagcggctaagaaatacggaccaagg
tcaaacaaaaaatacgatatactcgtcagtactccaaacagactcatcttccttctcaag
caggatcctccagctatcgacctcagcagtgtggagtggctgattgtcgatgagtccgat
aagctgtttgaagacggcaagacaggcttcagggagcagctggccaccatttttctggcc
tgctccggtccaaaggtgcgcagggctttcttcagcgccacttgcacggcagatgtagaa
cagtggtgccgcctgaacctcgataacctggtttctgtaaacattgggcacagaaataca
gctgtggatacggtagatcagcagctgctgtttgtcgggacagagaatggcaagcttgtg
gcaatgagggatatcatcaaaaagggcttcctgccgcccatgctggtgtttgttcagact
atagaaagggcacgggagcttttccatgagctggtgtatgaaggcatcaacgtggatgta
atccacgcagaccgcacacagcagcagagagacaatgtggtgaacagtttccgctccggg
aagatttgggtattgatctgcaccgctctgctcgccagaggaattgacttcaaaggcgta
aacctcgtgctcaactacgacttccctaccagcgctgtggagtacatccatcgcattggt
cgtactgggagagctggacatcaggggaaggccgtcaccttcttcacagagaatgacaaa
cctctgttgcgcagcattgctaatgttataaaacaagcgggctgtcctgtaccagactac
atggttggtttcaagaaaatacacagtaaagtaaagcggagacttgagaagaaacctccc
aagagaagcaccatttgcacaactcctcgcttcttaatgaagaccaaaggcaaagatcag
aaaaaaggaaacaagcgagcagcgagtggagagcagaaaggagaaaacagagctcaaaca
acattgcagaaggagaaagaggaaaagaagacaaaaggacaggggctgaagaaaggaaat
aaaacacagaaagaaggaaaagaaaaacacaagaaagtgtctcagaaaacaacatcagag
acttcaggaaccaagttacaaaagaaaaaggggaagaaaactaagctgaaggcagactag
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