Oreochromis aureus (blue tilapia): 116313865
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Entry
116313865 CDS
T07295
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116313865 (hnf1ba)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116313865 (hnf1ba)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
HTH_5
Motif
Other DBs
NCBI-GeneID:
116313865
NCBI-ProteinID:
XP_031587547
UniProt:
A0AAZ1X104
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Position
LG14:complement(12590337..12608155)
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AA seq
568 aa
AA seq
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MFFKMVSKLTSLQQELLNALLDSGVTKDDLIQALDDLDPSPPNFGVKLENLPMSPQSGKM
NGGDADTKPVFITLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRAEVE
RMLAEDPWRAARMIKGYMQQHNIPQREVVDITGLNQSHLSQHLNKGTPMKTQKRAALYTW
YVRKQREILRQFNQAAHGPGSSMADKGNPDQGYYFAEFNPSGQGMGQPGEEVGIEPSCKK
MRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLGSNL
VTEVRVYNWFANRRKEEAFRQKLAMDAITAPSHGINPLLSHGSPHHPQASASPPMRYGQV
PSEVTSSSAISHHSSNAMATSQSVLQQVSPGGLDHSHSLLSPDAKMISGSGGGLPPVSTL
TNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVQFSQQL
HSPHQQSLMQQSPSHMSQQPFMASVTHSHMYPHKQEPPQYSHPSRFSSAMVVTDANSPLS
SISSSKTDAPVNKMVQLGGLSWCPLQAW
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgttctttaaaatggtgtcgaaactgacatccttgcagcaggagctccttaacgccctg
ctggactcaggagttaccaaagatgatctgatccaggccttagacgacctggaccccagc
ccaccgaactttggagtaaaactggagaacttgcccatgtcgcctcagagcggcaagatg
aacggaggggacgcagatacgaagcccgttttcatcactctcaccaacggccacagcaag
ggcaagctgtccggcgacgagggctccgaggacggggacgactacgacaccccgccgata
ctaaaggagctccaatcgctcaacacggaggaggccgcggagcagagggcggaggtggag
cgcatgttggcagaggatccatggcgtgctgcccgcatgatcaaaggttacatgcagcag
cacaacatcccccaacgcgaggtggtggacatcacggggctgaaccagtctcacctttcc
cagcacctcaacaaaggcacgcccatgaaaacacagaagcgagcggccctttacacctgg
tatgtcaggaaacagcgggaaattctacgacagttcaaccaggcagctcatggtcctggc
agcagtatggctgacaaaggaaatccagatcagggttattattttgcagagttcaatcca
tccggtcagggcatgggtcagcccggcgaagaggtgggcatcgaaccctcctgtaagaaa
atgaggcgcaaccgcttcaaatgggggcctgcgtcccagcaaatcctgtaccaagcctac
gagcggcagaaaaaccccagcaaggaggagcgggaggctttggtggaggagtgtaacaga
gctgagtgtcttcagagaggtgtctccccctccaaagctcaaggcctcggctcaaatctg
gtcacagaagtgcgagtctacaactggttcgccaaccgacgtaaagaggaagccttcagg
cagaagttggccatggatgcaatcactgctccgagccacggcatcaaccctctgctgtca
cacggctcaccacatcatccccaggccagcgcttcacctccaatgagatacgggcaagtt
cccagtgaggtcacctcctcctcggccatcagtcaccacagtagcaacgcgatggcgacc
agccagtcagtgctccagcaggtgtctccgggaggactggaccacagccacagtctgctg
tcacccgacgccaagatgatttcaggttcaggtggaggacttcctccggtcagcacactc
acaaacatccacagttcccatcacagccatcagcagacgcagaacctcatcatgcctctg
tctggagtcatggccatagcacaaagtttaaacacatcgcagtctcagacggtgccggtg
atcaacagcgtggcgggaagtcttgcagcgctccagccggtgcagttttcccaacagctc
cacagccctcatcagcagagcctgatgcagcagagtccgagccacatgagccagcagccg
ttcatggcctccgtcacacactcacacatgtatccacacaaacaagaacccccgcaatat
tcccacccgtcacgtttctcctcagccatggtggtcacagacgccaacagccccctcagc
tccatatcctcgagcaagacggacgctcctgtaaacaagatggtgcaacttgggggtctc
tcctggtgtcctcttcaagcttggtga
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