Oreochromis aureus (blue tilapia): 116313867
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Entry
116313867 CDS
T07295
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oau03009
]
116313867 (ddx49)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116313867 (ddx49)
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
90S particles
Helicases
116313867 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
116313867
NCBI-ProteinID:
XP_031587554
Ensembl:
ENSOABG00000013607
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All DBs
Position
LG3:complement(80477476..80484180)
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AA seq
477 aa
AA seq
DB search
MGDFSSLGLSDWLVKQCKQLGINKPTPVQENCMPAILQGRDCMGCAKTGSGKTAAFVLPV
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSNQ
PHVVVATPGRLADHIRSSNTFSMKRIQFLILDEADRLLEQGCTDFTKDLEVILEILPAKR
QTLLFSATLTDTLQELKSIAMNKPFFWESKSETRTVEELDQRYILTPEKVKDAYLVHLIQ
TFTDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQKQRFANLAKFKASVYK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLI
HSIEEQIQTKLKEYPVVEKEVLKILTQVNVTRRECEIKLESTDFDEKKEINKRKQLILEG
KDPELEAKRKAELEKIRSQKKKFKQKIQESIQKQKQLKKKLMKRRQMKKKETAQATA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacttttcctccctcggtctgtcagactggctggttaaacagtgtaaacagctg
ggaatcaacaaacccactccagtccaggaaaactgcatgccagctatcctccaaggtcgg
gattgtatgggctgtgccaagaccggcagtgggaaaacagcagcgttcgtgttgccagtg
ctgcagaaactctcagaggacccgtacggcatcttctgcctggtgctcactcccaccagg
gagctggcctatcagattgcagagcagtttcgagtcctggggaaacctttgggtctgaaa
gactgcatcatcgtcggtggaatggatatggtgacccaagccctggagctgtccaaccaa
ccgcatgtagtcgtagcaacgccgggccgactggccgatcacatccgcagctccaacacc
ttcagcatgaagaggatccagttcttgattttggatgaggcggaccggctgctggagcag
ggctgtaccgacttcaccaaagacctggaggtgatcttggagatcttgccggccaagcgt
cagacgctgctgttcagcgccacactgaccgacaccctgcaggagctgaagagcatcgcc
atgaacaaaccgttcttttgggagagcaaatcggaaacacgaacggtagaggagctggac
cagagatacatcctcactccagagaaggtgaaggacgcctatctggttcatctgatccag
acattcaccgatgagcatgatgactggtccatcatcatttttaccaacacgtgcaagagc
tgtcagatcctcaccatgatgctgcgggagtttaactttccaaccatctctctgcactcc
atgatgaaacagaaacaacgatttgcaaacctcgccaagttcaaagccagcgtctacaaa
atcctgatagcgactgatgtagctgccaggggtttggatatcccaactgtccaggtcgtc
attaatcacaacacccccggccttcccaagatctacatccacagagtcgggcgaacagcc
agagcagggaggaacggagtgtccatcacgctggtcacgcagtacgacatccacctgatt
cactccatcgaagaacagattcaaacaaagctgaaggaatatcctgtggtggagaaggaa
gtcctaaagatcctcacccaagtcaatgtgacccggcgggagtgtgagataaaactcgag
tcaacggactttgatgagaaaaaagagatcaacaagaggaaacagctgatcctggagggc
aaggatccagagctggaggccaagaggaaagctgagttggagaagatcagaagccagaag
aagaagttcaaacagaaaatccaggagagcattcagaaacagaagcagctaaaaaagaaa
ctgatgaagagaagacagatgaaaaagaaagagacggcgcaggcaactgcatga
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