Oreochromis aureus (blue tilapia): 116313968
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Entry
116313968 CDS
T07295
Name
(RefSeq) transcription factor SOX-6-like isoform X3
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116313968
Transcription factors [BR:
oau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116313968
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
MPS2
Motif
Other DBs
NCBI-GeneID:
116313968
NCBI-ProteinID:
XP_031587688
Ensembl:
ENSOABG00000013178
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Position
LG7
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AA seq
776 aa
AA seq
DB search
MMSSMRATPPFHPPPEEAEVIGQDSAGWVGDEHDGPKETVSPSLHDQSHPDELQPIREKP
TDAEWENVSPAVMDNESSKGGSVYSYRTTSTSPTKPEECPRDRGEPVIGLAFGTPERRKG
SLADVVDTLKQKKLVELTKTEQDEPSCMERLLSKDWKERVDRLNATELLGEVKGTPESLE
EKERQLSTMIGQLISLREQLLAAHDEQKKMAASQLEKQRQQMELARQQQEQIARQQQQLL
QQQHKINILQQQIQVQGHMPPLMIPVFPHDQRSLAAAAAAQQGFLFPPGMSYKPGENYPM
QFIPSAMAAAAASGLSPLQLQQLYAAQLASMQISPGAKMAPLPQAPNSSSPLSPSTLKSE
KRASSPVSQIKEEGSTQPLNLSARPKTAEPLRSPTSPTQSLFSGNKTSPTGMGKGRIPSP
IPSMGRNTSLDILSSLNSTALFGDQDAVMKAIQEARSMREQIQREQLHQQQQQPGHQSLE
AKLSALSSMNLNNGNKERLHYETLSQHLGKLGEDAGKMVHRVIDLTRPEDLDGSNIAEAR
VFRETRGRNNSEPHIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILGSRWKAMTNQE
KQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFV
GPQPPISLGNSPGGVGVYPGAISMATAATPSPHLTSDCSSNSASPDPAIPVIQSTYGVKS
EPGSGGGSNGGGIGALDLPGDHNNGDNDMDMYEDFEDEPKSDYSSDHETHEAVSAN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccatgcgagcaacgcctccctttcatccaccgcccgaggaagcggaagtg
attggtcaggacagtgcaggctgggttggtgatgagcacgacggcccaaaggagacggtg
tcaccttctttgcatgaccagtcccacccagacgaactgcagccaatcagagagaaacca
acagacgctgagtgggagaatgtcagtcctgctgtgatggacaatgaaagcagtaaaggt
ggctcagtctactcttaccggactacatctacctctccaaccaagccagaggagtgtcca
agggatcgcggggagcctgtgattggcctcgcctttgggacgccagagcgccgcaaaggg
agcctggcagacgtggtggacacactgaaacagaagaagctcgtcgagctgaccaagaca
gagcaggacgaaccctcttgcatggaaagactcctctctaaagactggaaggagcgcgtg
gatcgcttgaacgccactgaactcttgggggaggttaaaggtacgccagagtcgctggaa
gagaaggagcgccagctttccaccatgatcggtcagctgatcagcctgagggagcagctt
cttgccgcccatgatgagcaaaaaaagatggccgcctcgcagctggagaagcagagacaa
cagatggagctggccaggcagcagcaggagcagattgccagacagcagcagcagctcttg
cagcagcagcacaagataaacattcttcagcaacagatccaggtccagggtcatatgcct
cctctgatgataccagtgtttcctcacgaccagcggtctctggctgcagctgccgccgca
cagcaaggcttccttttcccaccaggcatgtcttataagccaggtgagaattacccaatg
cagttcattccatctgcaatggcagctgcagcagcgtctggactcagcccgttgcaacta
cagcagctgtatgccgcccagctggcaagcatgcagatctcaccaggagccaagatggct
cccctcccacaagctcccaactcctccagtcccctttctccctccaccctcaagagcgag
aagcgagcatccagccctgtctctcagattaaggaggaaggatccacacagccactgaac
ctctcagctagacccaagacagctgaacctcttcgctccccgacatccccaacacagagc
ctgttctctggaaacaagaccagccctacaggcatgggcaaaggccgcatccccagccct
attcccagcatgggccggaacacctccctggacatcttgtccagtctcaactccacagca
ctgtttggggaccaggatgcagtgatgaaggccatccaagaggccaggagcatgagggag
cagatccagagggagcagctccaccaacagcagcagcagccaggacaccagagtctggaa
gcaaagctatctgccctcagcagcatgaacctcaacaacggcaacaaggagcggctgcac
tatgagacactgagccagcacctggggaagctcggagaggatgctgggaagatggtccat
cgagtcattgacctgacaagaccagaagatttagatgggagtaacatcgcagaggcacgg
gtgttcagagagacacgaggcaggaacaacagcgagccccacatcaagaggcccatgaac
gccttcatggtgtgggcaaaagatgagaggaggaagatcctgcagaccttccccgacatg
cacaactccaacatcagcaagatccttggctctcgctggaaagccatgacaaaccaggaa
aagcagccatactacgaggagcaggcccgcttaagcaagatccacttggagaaatatccc
aactacaagtacaagccacggcccaagagaacctgcatcattgatggcaagaagctacgc
atcggggagtacaagcagatgatgcgttcacgacgtcaggaaatgaggcagttctttgtg
gggcctcagccacccatttctctgggcaacagtcctggaggtgtaggagtttacccgggt
gccataagtatggcaacagcagctacaccatccccacatctgacctcagactgctccagc
aactcggccagtcctgatcctgccatccccgtcattcagagcacgtacggtgtaaagtct
gagcctggcagtggaggaggcagcaatggcggtgggatcggagccttggatctgcccggc
gaccacaataatggagacaatgacatggacatgtatgaggactttgaggatgagcccaag
tcagactatagcagcgaccacgagacacatgaggctgtcagtgccaactga
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