Oreochromis aureus (blue tilapia): 116313982
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Entry
116313982 CDS
T07295
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04110
Cell cycle
oau04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116313982 (smc1b)
04114 Oocyte meiosis
116313982 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116313982 (smc1b)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116313982 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
116313982 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
116313982
NCBI-ProteinID:
XP_031587710
Ensembl:
ENSOABG00000006747
LinkDB
All DBs
Position
LG7:complement(23255123..23270354)
Genome browser
AA seq
1245 aa
AA seq
DB search
MGYLKQLDIENFKSWRGNQIIGPFMRFNCIIGTNGSGKSNVMDALSFVMGERVSSLRVKH
LRDLIHGAHVGKPVSNTARVAMTYCSDEEEETVFCRIITGDSSEYHINGLRVTFAKYVEE
LEKIGILTKAQNCLVFQGAVESIALKDPKERTKMLESISQSKEYAAEYNKKKEALLKARE
DTQFHFNKKKSATVERKQVSQEKIEAQKYQALLDELHQSRLQLSLAELYHNEQGISALSD
TLKKRQEAAAAKNSKLLIWEQTVKTQKKEHGRLTREQQHIDKEICTQEQILSQSRSQYIK
AKVNTSHHIKKAEDLRDALKKSQRMFSVKEQELEEHQQEISELKRTWRNYEKQVQEQGAA
RGRDIELDMDQSERYKELKELALKQGAVLSQQAEKLHWEVKADWEKIAFDERRKKEVENA
IKYNQTQLEDLTCRAEKLEEYTKTCKSSLEEYRQQEESLSAELQRGHQRTKEVNQELNQV
MEELGNACLDKQENRRQLQHKELLEKLRRLYPETVYGRLSDLCSPIHKKYQLAVTKVFGR
YMNAIVVASEKVARDCITFIKEERRGRETFLPIDNLILSPLNERLREMPGAKMVVDVVQV
NATTVATQLRKVVQFVCGNTLVCETVKEARSMAFDGQERFKTVSLEGTMFEKSGVISGGS
SNLRTKARCWEEKDVLQLKERKTQLTTELRDLMRLKRKELDLKQIVAQAQGAQTRLKYSK
NDLENLRKKNIPKCQAEISCLESELANLDSQIQMQMESVKTKEAEIKEIRDKLDQMENLV
FSDFCAEIGVDSIRQFEQERLKQQTELDKKRLEFESQHARLNTCIEYEQKQLEQQKKKVQ
KLEDTISKEEKFMTEQRKEEQKLLGVVEEGQNKLLEHKNKLLAKKSEVAAAKADLDQKTQ
VLQEMNRDLVKLQREVMTTETAIEQKRLARHNLLLACKIQNLPISLLSGSLNEISEVQLD
ADSESTTATMDIYEREARLLIDYSELETELKNLQAEQEVEASLENLRESVSSIEAVLQRT
TAPNLKALEKMREVKDKLQGVKEAFEASTKAARKCNQEFQQVRSQRLHLFSQCFEHVSVV
IDQIYKRICRNNSAQAILSAENPEEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIAALAF
IFAIHSFRPAPFLILDEVDAALDNTNIGKVTSFIREESRENMQIIIISLKEEFFSKADAL
LGVYSDFDECMFSCILTLDLRPYPLVEDDNGKQTDKEPSSDKRQD
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaacaactagatattgaaaactttaagtcatggagaggaaaccaaatt
attgggccattcatgcgatttaattgcataattggcacaaatggctcaggtaaatctaat
gtgatggatgccctgagctttgtcatgggggagcgggtttcttctctccgagtcaagcac
ttgagagacctgatccatggagctcacgttggtaagcccgtctccaacactgccagggtg
gccatgacgtactgcagtgatgaagaggaagagaccgtcttttgtaggatcattaccgga
gactcctctgagtatcacattaatggcctacgtgtcacttttgccaagtatgtggaggag
cttgagaagattggcattttgactaaagctcaaaactgtctggtgttccagggggcagtg
gagtccatagctttgaaggacccaaaggagagaaccaaaatgctggaatcgatcagtcag
tccaaagaatacgctgcagaatacaacaagaagaaagaggccctgctgaaggccagagaa
gacactcagtttcactttaacaagaagaaatctgctactgtcgagaggaaacaggtgtct
caggaaaaaatagaggcacagaaataccaggcactgttggatgaacttcaccaaagccgc
ctgcagctgagcctcgctgagctctaccataatgagcagggcatcagtgctcttagtgac
accctgaagaagagacaggaggctgcagctgcgaagaacagtaaactgctgatttgggag
cagacagtcaaaactcaaaagaaagaacacggacggctcacaagagagcagcaacacatt
gacaaagagatctgcacacaggagcaaatcctgtcccagtctcggtcccaatacataaaa
gcgaaagtgaacacgtctcatcacataaagaaggctgaggatctccgtgatgccctgaag
aagagtcagaggatgttttcagtcaaagagcaggagctggaagagcatcagcaggagatt
tctgaacttaagaggacctggaggaactatgagaagcaggtccaggaacagggagctgcc
cgtggaagagacattgagctagacatggatcagtcagagcgatacaaagagctgaaggag
cttgccttgaagcagggggctgtcctcagccagcaggcagagaagcttcactgggaggtg
aaagcagactgggaaaagatagcctttgacgagcgcagaaagaaggaagttgagaacgct
atcaagtacaaccaaacacagctggaagatttgacatgcagagcagagaagctagaggag
tacaccaagacctgcaagtcatcccttgaggagtaccggcagcaggaggagagccttagt
gcagagctgcagcggggccaccagcgtactaaggaggtgaaccaggagctgaatcaggtg
atggaggagttggggaatgcttgtttggacaaacaggagaacagaaggcagctgcagcac
aaagagctgctagaaaagctccgcagactctacccggaaactgtgtatggccgtctgtcc
gacctgtgcagccctatccataagaagtaccagctggctgtcactaaggtgtttggccgc
tacatgaatgcaatcgtcgtagcatcagaaaaagtagcccgcgactgtatcactttcatc
aaggaggagcggaggggacgcgagacttttcttcccatcgacaacttgattctgagtcca
ctgaacgagcgactgagggagatgcctggtgccaagatggtggtggatgttgtgcaggtt
aatgctaccacagttgctacccagctgaggaaagtggtgcagtttgtctgtggtaacact
cttgtgtgtgaaacagtcaaagaagccaggagtatggcctttgatggacaggaacgcttt
aagacagtgtctcttgaagggacaatgtttgaaaagtcaggcgtaatctccggaggctcc
agcaacctgcgaactaaagctcgctgctgggaagagaaggacgtgttgcagctgaaggaa
cgcaagacccagctgaccactgagttacgcgatttgatgaggctgaagagaaaagagctg
gacctgaaacagattgttgcacaggctcagggtgctcaaacccgcctcaaatactccaaa
aatgacttggaaaaccttcggaagaaaaatatccctaaatgccaagcggagatttcttgt
ctggagagtgaattggcaaacctggactctcagattcagatgcagatggagagtgtgaag
acaaaagaggcagagattaaggagatcagagacaagcttgaccagatggaaaacttggtg
ttttctgacttctgcgccgagatcggagtggacagcatcagacagtttgagcaggagcgc
ttgaaacagcagacagagcttgataagaaacggctggagtttgagagtcagcatgctcgc
ttaaatacatgcattgaatatgaacaaaaacagcttgagcaacagaaaaagaaggtccaa
aaactggaggataccatcagtaaggaagagaaatttatgactgagcagagaaaggaagag
cagaagttgttgggagtggttgaggaaggtcagaataagctacttgagcacaagaacaag
cttttagctaagaaaagtgaggtggctgctgccaaggctgacctggatcaaaaaactcaa
gtccttcaagagatgaacagggatttggtgaagcttcagcgagaggtgatgacaacagag
acggctatagagcaaaagcgcttggctagacacaacttgctgctggcctgcaaaatccag
aacctgcccatcagcctgttgtcagggagcctgaatgaaatcagtgaagtgcagctggac
gcagattctgaaagcactacagccaccatggacatctatgagagagaggcacgactactc
attgactactctgagctggagacagagctcaagaatttgcaggctgagcaggaagtagag
gcctctctggagaacctgagggagtcagtttcctccatagaggcagtgctgcagcgcacc
actgcccctaacctgaaagcactggagaaaatgagggaggtgaaggacaagttacaggga
gtgaaggaagcctttgaagccagcactaaagcagccaggaagtgtaatcaggagtttcag
caagtcagatcccagcgcctgcacctcttcagtcagtgttttgagcatgtgtctgttgta
atcgatcagatctataaaagaatttgcaggaataacagcgcccaggccattttgagtgct
gagaatccagaagagccgtacttgggtggcatcaactacaactgtgtagcaccagggaaa
cgcttcatgtccatggacaatctgtctggtggagaaaaagccatcgcagcccttgctttc
atattcgccatacacagcttccggcctgctcctttcttaatcttggatgaggtggatgca
gccctggacaacactaacattggaaaggtgaccagtttcatcagagaggagtccagggag
aacatgcagatcatcatcatctctctcaaggaggagtttttctccaaggcagacgctctg
ctgggcgtctattcagattttgatgaatgcatgttcagctgcattctgaccctggacctg
cgtccctatcctctggttgaagatgacaatgggaaacagactgacaaagagcccagctcc
gacaaaaggcaggattga
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integrated database retrieval system
