Oreochromis aureus (blue tilapia): 116314580
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Entry
116314580 CDS
T07295
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03030
DNA replication
oau03410
Base excision repair
oau03420
Nucleotide excision repair
oau03430
Mismatch repair
oau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116314580 (pold1)
03410 Base excision repair
116314580 (pold1)
03420 Nucleotide excision repair
116314580 (pold1)
03430 Mismatch repair
116314580 (pold1)
03440 Homologous recombination
116314580 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oau03032
]
116314580 (pold1)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116314580 (pold1)
Enzymes [BR:
oau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116314580 (pold1)
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
116314580 (pold1)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
116314580 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
116314580 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
116314580
NCBI-ProteinID:
XP_031588524
Ensembl:
ENSOABG00000002485
LinkDB
All DBs
Position
LG4:complement(22715838..22726884)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDHKRHNGSRLMGGPSQAKRGKTMGEWEDSPSQFEEELSMFEEADLDAEEMEGQAGHDVI
PVGDLFSADLNPRWRRPPAPSLDPSSDILVFQQIDLDYYLGETVAGMPGQSQGKVPIIRM
FGVTDNGNSVCCHVHGFAPYFYVPAPNGFTSAHLVEFQKELNSAVLKDMRSNKDNISVTV
LAVDITRKESMYGYHGKRIIDFLRITMAMPRLIAPAKRLLEQGFKFSHFPTSNYQSYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYRVREEKSTDNTSSQSPSKASLCQYEVDVGWTDLI
SHPAEGEWQRIAPLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVN
YFPYLGRVRGIKSVLKDLNFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSL
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSVDKLGLAPEDFIKTPTGDLFVKSSLRKGLL
PEILENLLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTLSNGYQADAKVIYGDTDSVMVKLGVATVKEAMDIGR
EAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSASTHDKMDCKGIETVRRDN
CPLVANLINTCLQKILIDRDPQGAVEHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESILLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCK
AVLKTDAAVCDFCKKKESELYQKEIFHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSNLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggatcataaacgacacaacggcagccgtctcatgggtggtccatcccaggccaaacgg
ggtaaaacgatgggtgaatgggaggacagtccttcgcagtttgaagaggagttgtccatg
tttgaagaagcagacttggatgcagaggagatggaggggcaggcgggacacgatgttatt
ccagtaggtgaccttttctcagcagacctaaaccctcgctggcgacgtcctcctgccccc
tcactggacccatcatctgatattctggtgttccagcagattgatctggactactatttg
ggggaaacggtagcgggcatgcccggtcagtcgcaaggaaaagtgccaatcattcggatg
tttggtgtaacagacaatggcaacagcgtgtgctgccatgttcacggctttgccccttac
ttctacgttcctgctccaaatgggttcacatctgctcacctggtggaatttcaaaaggag
ctgaactctgctgtcctgaaggacatgcgctccaataaggacaatatctcagtcacagta
ttggctgtggacatcacccgcaaagagagcatgtatggttaccatgggaaacgcattatc
gatttcttgcggataaccatggcgatgcctcgtctcatcgcccctgcaaagagactgctg
gaacagggctttaagttttcccatttccctaccagcaattaccaatcctatgaggccaac
atagactttgaaatcaggtttatggtggacagcgacgtggtgggttgctgttggattgag
ctcccaaaagggaagtacagagtacgtgaagagaagagcacagataacaccagttctcag
tccccaagcaaggcctccttgtgtcagtatgaggtggatgtgggatggacggatctgata
agtcaccctgcagagggagagtggcagaggattgcaccgctcagagtcctcagctttgac
atagagtgcgcaggaagaaaaggaatcttcccagagccggacaaagatcctgtgattcaa
attgcatctatggtgcagcgtcagggtgagacggagcccttcattcgcacagtcttcacc
ctgcagtcctgcgccagcatcgttggctctcagatactgtgcttcacacaagagacaaag
ttactgcagagctgggctgagtttttgaggactgtggatccggacattattactggctac
aacatccaaaactttgactttccctacttgctcaacagggcagctgctttgaaggtgaat
tattttccgtacttgggccgagtgcgaggcatcaaatcagttttgaaagacttgaatttt
cagagcaagcagatgggccgcagagaaaacaagaccattaacatggagggccgtgttcag
tttgacctgctccaggttcttctcagggattataagttgcgctcatacacactgaacgct
gtgagtttccactttttgcaagagcagaaggaggacgtgcagcactcaatcatcactgat
ttgcagaatggaaatgagcagacgcgccgtcgtttggcagtctactgcctgaaagacgcc
tatctccccctgcgcctgctgcagaagctaatgtgtgtgattaactacatggagatggcc
agagtgaccggcgtgcctctcacgtacctgctctcacgaggccagcagatcaaagtggtc
tctcagctgctgcgacaggccatgaaacaggatctggtaatgcctgttgtaaagacagaa
ggaggcgaggactacactggagctactgtcatcgagccagagaaaggatattacagcctt
cccattgccacattggatttctcctccttgtatccgtccatcatgatggctcacaatctg
tgctacaccactctgctgcagaagggctcagtggataaactgggcctggctcccgaggac
ttcattaagactccaacaggcgatctctttgtgaagagttctctaagaaagggacttctc
ccagagatcctggaaaacctgctgtctgcccgaaagagggccaaagcggagctaaaaaag
gaaaccgaccccttcaagaagcaggtgctggacggccgacagctggccctcaaaatcagc
gcgaactctgtgtatggcttcacgggggcccaagtgggcaaactgccctgcctagagatc
tcacagagtgtcaccggttttggaagacagatgattgagcaaaccaagcagctggtggag
tctaagtacacactttccaatggctaccaggctgacgccaaggtaatttatggagacacg
gactctgtcatggtaaagcttggagttgcaacagtaaaagaggccatggatatcgggaga
gaggcggccgagtgggtatcatcccattttacaccacccatcaaactggagtttgagaag
gtgtactacccgtatctgctgatcaataagaagcgctacgcaggcctgtatttctcctcc
agtgcaagcacgcatgacaaaatggactgcaaaggaattgagaccgtccgcagagacaac
tgccctctggtggctaacctcatcaacacctgtctgcagaaaatcctcattgacagggat
ccccagggggccgtggaacacgccaaagaggtgatctcagacctgctctgcaatcgcatc
gacatcagccagctggtcatcaccaaggagctaacgcgcactgcccaggagtacgctggc
aagcaggcgcatgtggagctagcagagaggatgaggaaaagagatgcaggtagcgccccc
aacctgggagaccgagtcccgtatgtcatcatcaaggctgcgaagggagcagcggcatac
atgaagtcagaggaccccatctacgtgctggagaacaacattcccattgacacacaatac
tacctggagcagcagttgtccaaacctctgctgagaatatttgagcccatcctgggagag
agcaaagcagagagcatcctgctcaagggcgaccacacacgctgtaaaactgtgttaacc
tcaaaggttggaggcctcatggcgtttgctcagaagagaagcacctgtattggctgcaaa
gctgtgctcaagacagacgcggccgtgtgtgatttctgcaagaagaaagagtctgagctg
taccaaaaagagatctttcacctgaatacgctggaggagcgtttctctcgcctgtggact
cagtgtcagcgctgtcaaggctcactccatgaagatgtgctgtgcaccagccgggattgt
ccgatcttctacatgaggaaaaaggttcagaaagacctggacgaccagagcaatctggtg
tctcgtttcggatggtga
DBGET
integrated database retrieval system
