Oreochromis aureus (blue tilapia): 116315041
Help
Entry
116315041 CDS
T07295
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116315041 (chd5)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116315041 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
116315041
NCBI-ProteinID:
XP_039467779
Ensembl:
ENSOABG00000007444
LinkDB
All DBs
Position
LG5:30405692..30442709
Genome browser
AA seq
2000 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDIPDEDDEGERNTVPLTPLDRFFSDDESLKQQKKKPKKMKE
GKLPKVKKRKKEGAIQARLDSDLEETSEVEEERERPEIGSESESSMYGPTKKKKKKPKEK
KEKKPRKKKRDEEDDDDDDDDGNMKEPKSSSQLMHEWGLEDVQYGFTEDDYKTITNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQ
PTSVSSSQLSSQLGPIKKAKTKEGKGPGVRKRSKTVKEVKKKPKPKKTKSKSGQSGKKKK
ASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEDEDEEEA
PGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQKILHWTWGEAPLPAEPPTGPDGKPTDPLTKPPLKGRPEREFFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAAMEERFYRYGI
KPEWMVIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDIPDYESHKPSYWDHREQ
ILGEDQRPLVVRKGKKLKEDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYE
LITIDQAILSSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELF
HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI
VRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP
VLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKY
ERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHND
IQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKMGSMSKQ
ELDDILKFGTEELFKDEMEAARTMGDNKDGEEGSVIHYDDDAISKLLDRSQDATEDTEIQ
NMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLK
SEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE
REFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVN
GKLSSPDLIPIGMELKKLNESVSSDPNTPVPASPVATQPSTPIPQEKNESFLGTAEDKET
TEPESKKLSEQEASTVEPASAPEKATDSDENKGNSEEKTGDERNRTESPSTKTEPSANPK
EPAFKQSEAQSTHTSPKMEPCKETEKSSEKGDTDSPLAKTEDKENKPDDVKSEDALEGRL
NGDKDTLDEMDESRKEDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIWHR
RHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQ
ALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLH
KVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGNEPPPQQPFSP
GGFGCSQMYSGSFGGGFRGPGGQPMVNYSQMPLGPYVSVSSNGPPPPTSHLDKKSLDSLR
DVATPDLKSGKPSDVICIED
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagcaatgaagacgagggacaagacgacatggattttgaagacgat
ataccagatgaggatgacgaaggtgagcgcaacacagttcccctcacacctctcgaccgc
ttcttttctgacgacgagtccctcaaacaacaaaagaagaagcccaaaaagatgaaggag
ggaaaactgccgaaagttaagaagaggaaaaaagagggagcaattcaggcacgacttgac
agtgacctggaagagacttcagaggtggaggaggaacgggaacgtccggaaatcggctct
gaaagtgagagcagcatgtacggtcccaccaagaagaagaagaagaaacctaaggagaag
aaagagaaaaagcccagaaagaagaagagagatgaagaggatgacgatgatgatgatgat
gatggtaacatgaaagagcctaaatcatcgagccagctgatgcacgaatggggtcttgaa
gatgttcagtatggcttcactgaggatgactataaaaccattaccaactacaaggctttc
agccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtcaaagatg
atgacagtgttaggggccaagtggcgagagttcagtgccaacaacccgttcaaaggtgca
tctgccaccgctgtggccgccgctgtggctgctgcagtggaaacggttactgtggcacag
ccaacgtctgtcagcagcagccagctgagctctcagctggggccgatcaaaaaagccaaa
accaaagagggaaagggaccaggagttagaaagagaagtaagactgtgaaagaagtgaag
aagaagcccaagccgaagaagaccaaatcaaagtcgggccaaagtgggaagaagaagaaa
gcatcctcgagtgaggaggacttcctggaggagtcggactttgatgacatcagcatccac
agtgcctctgtgctttctgatacctcgggggccgccaccaagaaaaaggcccgacgtggg
cggaaaaaaaggaaaaaggaggacggtgatggctatgagacagaccaccaagactactgt
gaggtttgccagcagggtggagagatcatcctgtgcgacacctgtcccagagcttaccac
ctggtctgtctggaccctgagctggagaaggccccagagggaaaatggagctgtccacac
tgtgagaaggagggaatccagtgggaggccaaagatgaagatgaagatgaggaggaggct
ccaggtgaggaagaggatgaccacatggagttttgcagagtttgtaaagatggaggagag
ctgctgtgttgtgatacctgcccatcatcctaccatatccactgcctcaacccgccgctt
cccgagataccaaatggggagtggttatgtccgcgctgtatgtgccctcccctcaaagga
aaagtacaaaagattctgcactggacgtggggagaagctccgctgccagccgaaccacct
acaggacctgatggcaagccaacagatccgctcaccaagcccccgctcaagggccgccca
gagagggagttctttgttaagtgggctggcctttcgtactggcactgctcctgggtcagc
gaactgcagttggagctgtaccacacggtcatgtaccggaactatcagcgtaagaacgac
atggacgagcccccgccatatgactacggctccggagaggaggagctcaacagtgagaag
aggaagagcaaagatccccagtatgctgcgatggaggagcgcttctaccgttatggcatt
aaaccagagtggatggttatccaccggatactcaatcatagttttgataaagatggtgac
gtgcactacttgatcaagtggagagacctgccctacgaccagtgcacctgggaggtggat
gattttgacatcccagattatgaaagtcataaaccttcttactgggatcacagagagcaa
attttaggagaggatcagcgcccccttgtggtgaggaaaggcaagaaactaaaagaggac
catccaaaaagagaagtccctcctgatgctccaatcatagatcccaccatcaagtttgag
caccagccatggtacattaatgccactgggggaacgctacacccgtaccagctggaaggc
ctgaactggttgaggttctcttgggctcagggcacagatacgatcctggctgatgaaatg
ggcctgggaaagacggtgcagacaatagtgtttctctactcgctgtataaggagggtcat
tccaaaggacctttcttggtgagcgcacccctttccactatcattaactgggagagagaa
ttcgagatgtgggctccagatttctatgtggtgacttacactggagacaaagacagcagg
gcaatcatcagggagaacgagttcacctttgaagacagtgcagtaaaatcagggcgaaag
gtgttccgtatgaagaaagacactcctatcaagttccatgtgctgctgacatcttatgag
ctgattactatagatcaagccattctgagctctatcacctgggcctgtctggtggtagat
gaagcccacagactgaaaaacaaccaatcaaagtttttcagaattctcaatgggtataag
atctactacaagctgctgctcactggaactcctcttcaaaacaacctagaagagctgttc
cacctccttaacttcctcaccccagagcgcttcaataacctggaaggcttcctggaggag
tttgctgatatctctaaagaggatcagatcaagaagctccacgacctgctgggacctcac
atgctcaggaggctgaaagctgatgtcttcaagaatatgcctgcaaagacagagctgatt
gtcagagtggagcttagccccatgcagaagaaatattacaagtttatcttgacacgaaac
ttcgaggctttgaactccaaaggtggagggaaccaggtgtccctgctcaacattatgatg
gacctgaaaaagtgctgcaaccacccttacctgttccctgtggccgctgtggaggctcct
gttttacccaatggttcttatgatggcaacctactggtgaagtcctcaggaaaactgacg
ctgcttcagaaaatgctaaaaaagctcaaagatgaaggacacagagttctcattttctct
cagatgacaaagatgctggatctgcttgaggactttcttgagtttgagggttataaatat
gaacgtattgatgggggaattactggaggtctaaggcaggaagccattgaccgcttcaat
gcaccaggcgcgcagcagttctgcttcttgctttcaacacgagctggaggccttggcatc
aacctggccagcgcagatactgtcatcatctacgactctgactggaatcctcacaatgac
atccaagcatttagcagagcgcaccgtataggccaaaacaagaaagtgatgatctaccgg
tttgtgactcgaggctcagtggaggagcgaatcacccaagtggccaaaaggaaaatgatg
ctgactcacctggtggtgcgccctggcctgggctccaaaatgggctccatgtccaaacaa
gaactggatgacatcctaaagtttggaactgaggagctttttaaagatgaaatggaagca
gcacgaacaatgggtgataacaaagatggtgaggagggcagtgtgattcactacgacgat
gatgctatctcaaagctgctggaccgcagccaggatgccactgaagacacagagatacag
aatatgaatgagtacctgagctccttcaaggtggctcagtatgtggtgaaagaagaagat
ggagaggaggaggtagagcgagagatcattaagcaagaggagaacgtggatccggactac
tgggaaaaactccttcgccaccactatgagcagcagcaggaagatctggcgcgaaatctg
ggcaaaggcaaacgcatccgaaagcaggtcaactacaacgatacgacccaggaagaccaa
gaatggcaggatgatctttcagacaatcagtcggagtactccgtggggtccgaggacgag
gacgaagatttcgaggagaggcctgaaggaggacgcagacaatcacgtcggcagctcaag
agtgagaaagacaaacctcttccacccttactggctcgggttggaggcagtatcgaggtc
cttgggttcaacgctcgtcagaggaaagccttccttaatgccatcatgcgctggggcatg
ccccctcaggatgctttcaactctcactggctggttagggacctgagagggaagagtgag
cgcgagttcagggcctacgtgtctctgttcatgagacatttatgtgagccgggggcagat
ggagcagagacctttgccgatggagtccctcgcgaggggctgtctcgtcagcatgttctt
accaggatcggagtcatgtcccttgtcaggaaaaaggtccaagagtttgagcatgtaaat
gggaagttaagttctcctgatctgattcccattggaatggagctgaagaaactgaatgag
agtgtatcctctgatcccaacacgcctgtgccagccagccctgttgctactcagcccagc
actcctatcccacaagaaaaaaacgagtctttcttgggtactgcagaggacaaggaaacc
acagagccagagagcaagaaactgtcagagcaggaagcttccactgttgagccagcatct
gcacccgagaaggcaactgacagtgacgagaacaagggcaactcagaggagaaaacagga
gatgagaggaacagaaccgagtcgccctccacaaagacggagccatctgctaacccaaaa
gagccagctttcaaacagtccgaggcgcaatctactcacacctcacctaagatggagcca
tgcaaagaaaccgaaaagtcctcagaaaaaggagacactgattctcctctggcaaaaact
gaagacaaggaaaataaaccagatgatgtaaagagtgaagatgcattagagggtcgatta
aatggagacaaggacactttggatgagatggacgagagcaggaaggaagacaaaaatgga
ttcaaagcaaagttcatgtttaatatagctgatggaggttttacagagctgcacaccctc
tggcagactgaagagcgagcagcgctgtcttctggaaagatgcatgacatctggcaccgt
cgccatgactactggctgttggctggcatcgtgacacatggttacgctcgctggcaagac
attcagaatgatccacgttatgcgattctgaatgagcctttcaagaccgagatgcataag
ggcaactatttagaaatgaagaacaaattcctggctcgccgctttaagttgttagagcag
gctctggtgatcgaggagcagctgaggcgggcagcttacctgaatatgacccaggacccg
agtcaccctgccatggcactcaacacgcgctttgccgaggtggaatgtctggctgagtcc
caccagcacctgtccaaagagtcactggctgggaacaaacctgccaacgccgtgctgcac
aaagtgctgaaccagctggaggaacttctgagtgacatgaaagcagatgtgacacgactg
cccaacatgctgtccaggatcccaccggtgtcggcgcgcctgcagatgtctgagcggagc
atcctgagccgcctcaccagccgaggcaatgaacctccaccgcagcagccgtttagtcca
ggtgggtttggctgctcccagatgtacagcggcagttttggagggggattcagaggacca
ggcggacagcctatggttaactacagtcagatgcccttaggaccttacgtcagcgtctcc
tctaatggccccccaccccctacaagccatctggacaagaagtcacttgactccttgagg
gacgtggctacgcctgacctcaaatcaggcaaacctagtgatgtcatctgtattgaggac
tag
DBGET
integrated database retrieval system
