Oreochromis aureus (blue tilapia): 116315080
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Entry
116315080 CDS
T07295
Symbol
arhgef10la
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116315080 (arhgef10la)
03036 Chromosome and associated proteins [BR:
oau03036
]
116315080 (arhgef10la)
Membrane trafficking [BR:
oau04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116315080 (arhgef10la)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116315080 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
SOS1_NGEF_PH
CFAP43_N
DUF7675
RHG20_PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
116315080
NCBI-ProteinID:
XP_031589106
Ensembl:
ENSOABG00000018686
UniProt:
A0A668V066
LinkDB
All DBs
Position
LG5:30444483..30558511
Genome browser
AA seq
1289 aa
AA seq
DB search
MSTVVSQQLLKQDGEDDDEEQGEEFEFDDSTDEDKLQEDSKTIIDCVKPVQASKHEDNVT
SGSISQTFTDSTRLPTASPSAGPDSVATKDPASVSTTDVPVTESPNCASAAEADEPSASV
PCVGQELQGFPVAPSAVESPVDSGDHSKETVKQGSRGIPEAEPPTAEASEVIYDDVPSEE
PLSPDEADMIYEDVQRDTGALEAGNGWSSSEFESYDEHSDNEAKLPTKSKLSPEVRRLRE
RCARTKRELAMRLSGKHNYDIKVQQLMKAARSGTKDGLERTKIAVMRKVSFLQRKDQLEE
EDDAGYLDVAVSEVKHPPPQLSPMPEGLTSHQVVRRHILGSIIQSERSYLESLRRILQEY
HRPLMEADPRILSPRKIRPIFYRIREITQCHSMFQIALASRVAEWDSTEKIGDLFVASFS
KSMVLDVYSDYVNNFTNAMALIKKACMSKPAFLEFLKKKQASSVDRITLYGLMVKPIQRF
PQFILLLQDMLKNTPKGHVDRLPLQLALTELEVLAEKLNEQKRVADQIAETQQLARSVSD
RLLSKQLNSEQGSLVLCETLIETVYGERGQVLKSKERKVFLFDDVLICANINVKGPPDIS
SLVPVGPKYTIKWSAPLQQVQVVEVGQEGSQSKDTLFQQSGAKRPSGTFTSGRAILGPPR
LYQELQELQHDLSVVEEVTLLVGTLEGTYQNLNTTVAQDWCLALQRLIRIKEEQIQSANK
CRLRLQVPGRPDKSGRPVSFMVVFNTPNPLSKISWVNRLHLAKIALREENSPGWLCGEDE
GKTTAPFWYPLLACHMSVFATKSTERKLEAALHNPVHCALLGFSAASTSLPQGYLWVAGG
AEGSQGQIEIFSLNRPMPRAVKSLQVDSPVRCLEYVPLPSPTDEVESGVPKTPSAIGSNI
CVGLDDGRVLVYGSVDTAAQCLLTLHNPEGCPVLCLKHSSRFLFAGLRNGTMMVYGRNNS
DDLWDPKSHRCVSLGTEPVRTLLVLDDSVWASCGNSVTVVEISSFNTQKFEVHPDPLVSV
AHMACAGGGVWMAFSEGSSIRLFHTETLELLQEINISTRSTFQNTGQKSMRVTSLLICQG
LLWVGTAQGLIITLPVSKLEGIPKITGKGMISLNAHCGPVDFLAATTSSLSPELLKRDSV
GDSPDSACGGEDRSDNSSQESLQPSSSYQGEGRGKGRGVLLQYKLRSTSGLPGRPLTALG
DEASDSSLESLEHSVEDGSIYELSDDPEMWVRGRTCERDGGRRDRVISAAVISGGKGFRR
LKEGAAAGTRTSGEGLENILMVWQLPLTV
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgtggtgtctcagcaactgctaaaacaggatggagaggatgatgacgaggag
caaggagaagagtttgagtttgatgacagtacagatgaggataaacttcaggaagacagt
aagacgatcatagactgtgtcaaacctgtccaagcatcaaagcatgaagacaacgtgaca
tcaggcagcatctcacaaacatttactgacagcacacggcttcctacagcttcaccttct
gctgggccagacagcgttgccaccaaggatccagcttcagtttctaccacagatgttcca
gttactgagtcacccaactgtgcctcagcagcagaagcagatgagcccagtgcttcagtt
ccttgtgtaggacaggagctccagggttttcctgtggcaccatcagctgtggagtccccg
gtcgattcaggagaccacagcaaagaaaccgtcaagcaaggctcgaggggcatccctgaa
gccgaaccaccgacggcagaggcttcggaggtgatctatgatgatgttccaagcgaagaa
cccctctctcctgatgaagcagatatgatctatgaagacgttcagagagacactggtgct
ttggaggcaggcaatggatggagctccagtgagtttgaaagctacgatgagcattctgat
aatgaggccaaactaccaacaaagagcaagctctctcctgaagtgcgtcggctgagggaa
cggtgtgccaggaccaaacgagaactggccatgaggctgtctggaaagcacaactatgac
atcaaggttcagcagctcatgaaggcagcaagaagcggaacgaaggatgggcttgaaagg
accaaaatagccgtcatgcgaaaagtttccttcctgcagagaaaagatcaattggaagag
gaggatgatgcaggatatctggatgtggctgtgtcagaagtgaagcatcctcccccacag
ctgagcccgatgccagaggggctgaccagccaccaggttgtcaggcgccatatccttggc
tccatcattcagagtgagcgcagctacctggaatctctcaggagaatcttgcaggagtac
caccgaccactgatggaagctgatccacgcatcctgagcccacggaaaatccggcctata
ttttacagaatcagggagatcacccagtgccactccatgtttcagattgcactggcatca
cgtgtggccgagtgggacagtactgagaaaatcggagacttatttgttgcatcgttttcc
aagtccatggtgctggatgtatacagcgactatgtaaacaacttcactaatgccatggcg
ctcattaaaaaggcgtgcatgtccaaaccagcttttctggaattcctaaagaaaaagcag
gcatcaagtgttgatcggatcactctgtacggcctgatggttaagcccattcagcgattc
cctcagttcatactgctcctgcaggacatgcttaagaatacgcccaaaggacatgtggat
cgcctgcccctgcagcttgctctcacagagctagaggtgctggctgagaagctgaatgaa
cagaaacgagtagccgaccagattgcagagactcaacagctagcccgcagcgttagtgat
cgcttgctcagtaagcaactgaactcggagcaggggtcactcgtcctttgtgagacgctt
attgagactgtgtatggtgagcggggacaagtcctgaagtcgaaggagagaaaggtcttc
ctctttgatgatgtactcatctgtgccaacataaatgtcaaagggcctccagatatcagc
agcctagtccctgttggccccaagtacacaattaagtggagcgccccccttcaacaggtg
caagtagtagaagttgggcaggagggctctcaaagcaaagacaccttgttccagcagagt
ggggctaagaggccaagtggtaccttcacgtcaggtagagcaatcctaggccctccacgg
ctttaccaggagctacaagagctacaacatgacctttctgttgtggaagaggtcactctg
cttgtgggtacattggaagggacatatcagaacctcaacaccactgtggcccaggactgg
tgtctggctctgcagaggcttatccgcatcaaagaagaacagatccagagcgctaacaaa
tgtcgcttacgcctgcaggtgcctggcaggccagacaagtcagggcgtcctgtcagtttc
atggtggtcttcaacactcctaacccccttagtaagatctcttgggtcaaccgtctgcac
ttggccaagattgcactacgagaggaaaattcaccaggctggttatgtggagaggatgaa
ggaaagacgacagcccccttttggtatccactgcttgcctgtcacatgtctgtctttgct
acaaaatcaacagagagaaagcttgaagctgctctccacaatcctgttcattgtgcgctg
ttgggcttctctgcagcaagtacatccttacctcaaggatacctctgggtggctggtgga
gcagaaggttcccaaggacagatagagatattttccctcaacagacccatgccacgggct
gtaaagagcctgcaagtagattctccagtccgatgtcttgaatatgtcccgctaccttcc
ccgactgacgaagtggagtcgggagttccaaagacaccctcggcaatcggctccaatatt
tgtgttggattagacgatggccgagtgctggtctatggcagtgtggacactgcagcacaa
tgcttactgaccctccataacccagaggggtgccctgtgctctgcctgaagcactcctcc
cgcttcctgtttgcaggactgcggaacgggaccatgatggtttatggaagaaataacagt
gatgatctttgggaccctaaatcccatagatgtgtaagcctgggtacagagccagttcgg
acactgctggtgttagacgactcagtgtgggcgagctgcgggaactctgtcacagtcgtg
gaaatatctagcttcaacacacagaagtttgaagttcatccagacccgctggtcagtgtt
gcacacatggcgtgtgctggtggaggggtgtggatggcattctcagaaggttcctccatt
cgtctctttcacactgaaacgttggaacttctgcaggaaatcaacatctcaacacgctca
acgttccagaacactggtcagaagagcatgcgagtcacaagtcttctaatttgccagggg
ctgttatgggtgggcacagctcaaggcttaattatcactcttccagtttccaaactggag
ggcatccccaaaataacaggaaagggaatgatctcactaaatgcccactgtgggcctgtg
gactttttggcggccaccacaagctctctgtctcctgaacttctaaagagggattctgtt
ggggatagcccagactctgcatgtggaggtgaggatcgcagtgacaactcctctcaggaa
tccctgcaaccatccagctcctaccagggagaggggagaggcaaagggcgtggcgttctg
ctgcagtataagctgcgctccacgtcgggactgcccggacggccgttaacggcgctgggc
gacgaggcgtcggactcctcgctggagtctttagagcacagcgtggaagacggatctatc
tacgagctcagcgatgacccagaaatgtgggtccggggacgcacttgtgaaagggatggg
ggccgcagggacagggtgatttctgctgcagttatctctggaggaaaaggttttcgcaga
ctgaaggagggagcagcagcaggtactaggacaagtggggagggtttagagaatattctt
atggtatggcagctcccactgacagtgtga
DBGET
integrated database retrieval system
