Oreochromis aureus (blue tilapia): 116315101
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Entry
116315101 CDS
T07295
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116315101 (tdrd12)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
116315101 (tdrd12)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116315101 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116315101
NCBI-ProteinID:
XP_031589131
Ensembl:
ENSOABG00000020129
LinkDB
All DBs
Position
LG7:complement(64300772..64326596)
Genome browser
AA seq
1395 aa
AA seq
DB search
MLKISVLKVENPSCLWGRPIWGLSGDVETSELYKKLHFQMNLFYRGAKQDMRTLKPTSLE
EGRVYVVYWAVKKSWCRAVVESIFVDSVSCQAWCFLVDHGEQVVVPSEQIRVAMENFLQL
PFGVRRFHLAGIKPTTLRVSLLEEKAELKPSARWDSSATLFLHKLLQASTLKEAVLLEPE
SDSTPIKLYVTIGDIKICVNDDLVAKRFAYYSTNSTDGLEEGDRLPVMLSSSILTQSVSL
VSNKPTAQTQPPSDQQCLVEAVGAADWLTAPSPPPQIVQHKLVKAGGEHRSVVTKQQLSP
NSQSGSGSDAAKSSSSDDTDSSLAAALTKNLQLFRFLQFMKPGSSFEPAAPQEAEVLPLI
SNEKPEAENLQSCQAESLVDEEASSSSRSVASAPPEETQSSDWVCARLLELLNPQALNPD
PDAEDAVVSPFDPCRSGILVHATFPVEPWISVNDPTIADTLCWVQRKQYSTLSPADCYSW
PAVARGCHTLVISSSADQPLSYLTPLLTHIMLNSIFTSHTSSSGPIAVLLCPGWEKVQAV
YDLLGVSKVSQKLYPTTVLLGIGKDEAKSVKIPKNCLLLVTTPFSLVRLLSCHCFLFLRL
CHLVLDEADQLVSLAPDEMTTILQHFQVTSDKESDSCPPQLIVVAKRWTNHMEGLLSTYM
PCPSIVISVPEEAALYGNVQQVILMTLEISKISVLLGTLSFSPDVGQKTLIVANSFQEVD
DVFKAVSTRSVFCLKIHEGLTHDIDFVLEQWKKDIGPGTHVILVTTDDCLKGLDIRDATC
VVHYSFPSSPKLFGSRLFCMAENFRNFSKRDQMRSSAVTRSVLLISERNARHVIGVLRYL
ERANALLPPELLTFAQGVQMANEDQKTDRHLCSHLKSFGVCRNNGICPERHRFISQLDQS
KLPASGVIEVVPLYIKTASVFYGRVVEKEDGGFEKMASEMASYYAEKKLGAKKLLEGGLY
AVQEDDVFHRVKLLSVPDRGDRLFFSVLVCFIDMGKEEEVKSHQILELPEQFHSLHEQAV
EIVVCRVKPIDSETSWHPKVTRAISQKIRGLQHRARVVLSLGNTVFVDPMVRVTQIPGMK
TVINEYNVQAEILKTGMGIRNQEHVDLLRALCEENSSSKDDGHVSRLADNITSLEDVRIT
AEEEVLANNFKAPDLSPLEAMRSGNQSLVPAPTDHLVPVCDQNSQSESEGGFGQRNTDKK
SAEQMESTRDGDVFPSTSYTAALNLHEEGVQEGADQSTREQVISTSIRTGSDDASRSFHP
LIRWYQTHDSAIVTMKLANPENQRCDFYSDRVIYSGSVNGRFYRADLELHYKIAADVCCW
EMKSNEPVLKLVKQQPGPWDKLLRNKNIFVSYDMEHFDEGEAEDGVPNGPWFVENTGEDD
WYGNSESSSESDDFL
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatatctgttctgaaggtggagaacccatcgtgcctctggggccggcccatt
tggggtctcagcggcgatgtggagacttcagaactttacaaaaagctacattttcagatg
aacctcttctaccgcggcgccaagcaggacatgcgcacgctaaagcccacatcgttggag
gaaggacgggtgtatgtggtgtactgggcagtaaagaagtcgtggtgtcgggctgtggtg
gagtctatcttcgtggactcggtttcctgtcaagcttggtgctttctggtcgaccacgga
gaacaagtcgtcgtcccctcagagcagatccgggtggcgatggagaacttccttcagctg
cctttcggggtgcgaaggttccacctggcgggaatcaaaccaacaaccctacgagtgtct
ctgcttgaggagaaggcagagctcaaaccgtcggctcggtgggacagctccgccacgctc
ttcctgcacaagctgctgcaagcatcgaccctgaaggaagccgtgctgcttgaacccgag
tcagactctacccccatcaagctttacgtgaccattggtgacatcaagatctgtgtgaac
gacgacttggtggcaaagaggtttgcctactacagcacaaattcaaccgacggcctggag
gagggggaccgacttcctgtgatgctgtcctccagcatcttaacccagagcgtctccctg
gtctcaaacaagccgacagcacaaacccaaccaccttccgatcagcagtgtctggttgaa
gctgtgggggcagctgattggcttacagctccttccccgcctcctcagattgtacaacac
aagctggtgaaggctggaggtgaacatcggtcagtggtcacaaaacaacagctatctcca
aacagccaatcagggagcggctcagacgcagctaaaagcagctcgtcagacgacacagac
tcgtctctggctgcagccctcactaaaaaccttcagctcttcaggtttctacagtttatg
aagcctggcagcagtttcgagccagcagctccgcaggaagcggaggtgttgcctctgata
agcaatgaaaaaccagaagctgagaatcttcagagctgtcaggctgaatctttggtggat
gaagaggcaagcagctccagcagatctgtcgcctcggctccaccagaggagacccagagc
agcgactgggtctgtgcacgcctgttggagttgttgaacccacaggctctgaacccggat
cccgacgccgaagacgctgtggtttctcccttcgacccctgcagaagtgggattctggtg
catgctaccttcccagtagagccgtggatcagtgtgaatgaccccaccatcgcagacacc
ctctgctgggtgcagcggaagcagtacagcactttgtctccagccgactgttacagctgg
ccagctgtggctcgaggatgccatacccttgttatctccagcagcgcagaccagccgctc
agctaccttaccccactccttactcacatcatgctgaactccatcttcacttcccacacc
tccagctcagggcccatagctgtgctgctgtgtcccggctgggagaaggtccaagctgtt
tatgacctcctgggggtgagtaaggtctcccaaaaactctaccccacaactgtgctgctg
ggcatcggcaaggacgaggctaagagtgtcaagatccccaaaaactgcctgctgttggtg
accactcctttcagtctggtccgtctgctgtcctgccactgcttcctgttcctgcggctg
tgccacctggtgctcgacgaagctgaccagctcgtcagtctggctccagatgagatgacg
accatcttgcagcacttccaggtcacctctgacaaggaaagtgattcctgtcctccgcag
ctgattgttgtagccaaaagatggacaaatcacatggagggtttgttatccacttacatg
ccatgccccagcattgtcataagtgttcccgaggaagccgctctctacggtaacgttcag
caggtcatcctcatgactctggagatcagtaagatctcagtcctgttgggaacgctcagc
ttcagccccgacgtaggccagaagacgctgatcgtagcgaactcctttcaggaggtcgat
gatgtgttcaaggctgtgagcaccaggtcagttttctgcctcaagatccacgaagggtta
actcatgacatcgactttgtgcttgaacagtggaagaaggacatcggccccgggactcac
gttattctcgtaaccaccgacgattgtctcaagggtctggacatcagagatgcgacctgc
gtcgtccattacagtttcccctcttctcctaagctctttggcagccgactcttctgcatg
gctgaaaacttcaggaacttctcaaagcgagatcaaatgaggagttctgccgtcaccagg
tcggtgctgctgatctcagaaaggaacgcccgccacgtcattggggttctgcgctacctg
gaaagggcaaatgccctgctgccccccgagctcctgaccttcgcacagggggtacaaatg
gcaaacgaggaccagaaaacagaccgccacctctgcagccacctgaagagttttggcgtg
tgcagaaacaatggcatttgtcctgaacgccaccgcttcatctcacagctggatcagtcc
aagctgccggcatctggagtcatagaagttgtaccgctctacataaagacagcctcagtc
ttctacggccgtgtcgtcgagaaggaggacggaggctttgagaaaatggcctctgagatg
gcttcgtactacgcagagaagaagcttggagccaagaagctgctggaaggaggactgtac
gctgtgcaggaggacgatgtcttccacagggtgaagctcctctctgtgcccgacagaggc
gaccggctgtttttcagcgtacttgtttgcttcattgacatgggaaaggaggaggaggtg
aaatcccatcagatccttgagctgccggagcagtttcactctctgcatgaacaggctgta
gagatcgttgtctgccgggtcaaaccaattgattctgagaccagctggcaccccaaggtt
accagagccatcagccagaagatccgcggacttcagcatcgagccagagtagttctcagc
ctgggaaacacagtttttgttgatccaatggttcgcgtcacccagattccaggaatgaaa
actgtcatcaatgaatacaacgtccaggcggagatcctgaagaccgggatgggaatcagg
aaccaggagcatgtggacctgctgagagcgctgtgtgaggagaacagcagcagcaaggat
gatggtcacgtgtccaggctggcagataatattacatctctggaggatgtcaggattaca
gctgaggaagaagttctggccaacaacttcaaggctccagacctttctccactagaggca
atgaggtcaggaaaccagtccctggtcccagcacctacagatcacctggtcccagtgtgt
gatcagaactcccagtcagagagtgagggtggttttggacagagaaacactgataagaag
tcagctgagcagatggagagcaccagagatggagacgttttcccatcaaccagctacact
gctgctctgaacctgcatgaagaaggtgtgcaggaaggtgctgatcaaagcaccagggag
caggtcatcagcaccagcatcagaacaggctctgatgatgcatcacgaagtttccaccct
ctgatccgctggtaccagacgcacgactctgcgattgtgaccatgaagctggcaaacccg
gagaaccagcgctgcgacttctactcggaccgagtcatttacagtggcagcgttaacggt
cggttctacagagctgacctggagcttcactacaaaatcgcagctgacgtttgctgctgg
gaaatgaaatccaatgaaccagttctcaaactagtgaagcagcagccgggaccctgggac
aaactcctcagaaacaagaatatatttgtgagttatgacatggagcactttgatgagggt
gaagctgaggacggagtgccaaatggtccgtggtttgtggagaacacgggtgaagatgac
tggtatgggaactcggagagcagcagtgagagcgacgactttttataa
DBGET
integrated database retrieval system
