Oreochromis aureus (blue tilapia): 116315275
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Entry
116315275 CDS
T07295
Name
(RefSeq) lissencephaly-1 homolog
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau00565
Ether lipid metabolism
oau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
116315275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116315275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oau04147
]
116315275
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116315275
Exosome [BR:
oau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116315275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_RFWD3
LisH
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
LisH_PAC1
Beta-prop_SPT8
Beta-prop_DCAF12
eIF2A
Nucleoporin_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
LisH_2
SutA-RBD
DUF2570
I_LWEQ
Motif
Other DBs
NCBI-GeneID:
116315275
NCBI-ProteinID:
XP_031589427
Ensembl:
ENSOABG00000011912
LinkDB
All DBs
Position
LG14:complement(20975234..21016870)
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKDELTLGGPVTQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAYSTILDATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGILFHPGGKFIVTCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacaacgtcaaagagatgaactaaatcgagccatagccgattatctacgt
tccaatggatatgaagaagcatactccaccttcaagaaggaggcggaattggataataat
gaagaactggataagaagtacgccggccttttggaaaaaaaatggacctcagtcatcaga
ttacaaaagaaggtgatggagcttgaatccaaactaaacgaagctaaagacgagctcact
cttggtgggcccgtaactcagaagcgtgaccccaaagagtggatcccacgcccaccagaa
aagtacgcgctgagtggccaccgcagtccggtcactcgtgtaatcttccaccccgtcttc
agcgttatggtgtcagcctctgaggacgcaacaataaaggtgtgggactatgaaacagga
gactttgaacgcacgctgaagggccacacagattcagtgcaggacatctcctttgaccac
acaggcaaactgctcgcgtcctgctccgcagacatgaccatcaagctgtgggacttccaa
ggtttcgagtgcatcaggaccatgcacggacacgaccacaatgtttcatctgtagccatc
atgcccaacggagatcacattgtttctgcctccagggataaaaccataaaaatgtgggag
gtggcaactggctactgcgtgaagaccttcacaggccacagggagtgggtccgtatggta
cgacccaaccaggacggcacgctgatcgccagctgctccaacgaccagacagtccgcgtg
tgggtggtggcctccaaagaatgcaaggctgagctgcgggagcacgaacatgtcgtggag
tgcatctcctgggcaccggagagcgcctactccaccatccttgatgccacaggctcagag
tccaagaagagtgggaagcccggccccttcctgctctccggctccagagacaaaaccatc
aagatgtgggatgtcagcactggcatgtgccttatgacgctggttggccatgacaactgg
gtgcgtgggatcctcttccaccccggaggcaagttcattgtgacctgtgcagatgacaag
accttaaggatctgggactacaagaacaagcgatgcatgaaaaccctgagtgcccacgaa
cactttgttacctctctggatttccacaaggccgctccttacgtggtcaccgggagcgta
gatcaaacggtaaaagtttgggagtgccgctga
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integrated database retrieval system