Oreochromis aureus (blue tilapia): 116315402
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Entry
116315402 CDS
T07295
Symbol
smg5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116315402 (smg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116315402 (smg5)
03032 DNA replication proteins [BR:
oau03032
]
116315402 (smg5)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
116315402 (smg5)
mRNA cycle factors
Common to processing body (P body) and stress granule
116315402 (smg5)
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
116315402 (smg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
116315402
NCBI-ProteinID:
XP_031589548
Ensembl:
ENSOABG00000006717
LinkDB
All DBs
Position
LG11:34254257..34276517
Genome browser
AA seq
1125 aa
AA seq
DB search
MSGPGQDSEPEAKVLLIKRLYRAVVETVHKLDVIIGSKSSYREVFKPENISLRNKLRELC
VKLMFLHPVDYGRKAEELLWRKVYYEVIQVIKTNKKHIHSRSALECAYRTHLIAGVGFYQ
HLLLYIQSHYQLELQDCIDWTHVTDPLIGRKKPVSATPKEMEWAQMACHRCLVYLGDLAR
YQNELAGVEAEQLAERFYHQALSVMPHVGMPFNQLGTLAGSKFYNVEATYYYLRCIQSDA
PFEGAYGNLKRLFDKAAKMYHQVKKQEMKKLSPSRQRSKDIKRLLVSFMYLQSLLQPKNS
PMETELTSLCQSVLEDFNLVMFYLPPPTHGGAHHTPSEEEEEQQQHSDSSYPVLPDNLIF
KMVVTCLMVVHSLKRGGSKQYSASIAFTLALFSHLVNHVNIRLQAELEEAESQVPPLQTD
AADDLDMKDTTAAPTDPSGERPLQNGSLEQEDEEDKDEDGSERVAANKHGSIEEQRKMNE
EKQRQKKKYSRLSRLRRRRCARKDCHGEDESDLSEGFESEEEEDDDEERKGRADSTGGTT
TGTPVSLSSVKKEPKRDALGEEGSWGSGSEEEEEEEGGTAFDVETDSDMNSQESRSDLED
IEDTENSENSEGHVREHQDDEDEDQPKEVGGERDTTDTPPTTNGPLMSSDSSITSNLQAM
SSQLFQAKRCFRLAPTFSNMLLRPHASSSSSIPTPTDSSAPPSQETPPPPPGDSPCEMNP
GTANGTSENDLDSDSEGSQHSTQSVHSEKTLLEKLEIMTNQGLIQVVKVFLDWLRTNTDI
ILMCAQSSQSLWNRLSVLLNLLPDGSKMLEAELGLNAEVTELLNECERPDLVQSLLLPED
LALRHLPALSVAHRRLDFSCRNPSLSPLQECVVRVCCIRSFGHFLTSLQGNVLHFNPEAG
IFTSISQSKQDNLVQQAKAQFRMAEEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQS
SMSPYLVPDTAALCQHLNLIRQLAGSGCFIIIIPRTVIDGLDRLKKENAGARDGIRFLES
EFRKGNRYIRCQKESGRSFERDKLKRQDIEAWHLYKMVDSCRQLTVSQSNGDEDTAGMVT
ILTGHEVEELCSRSAAMKAAIQATGSAGMELKNIVEFYRQWKEIG
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacccggacaggacagtgagccagaggccaaagtccttctcatcaagcgactc
tacagggctgtggtggagactgtgcacaagctagatgtcatcatcggcagcaaatcgtcc
tacagagaagtcttcaagccggagaacatcagccttcgcaacaagctgagggaactttgt
gtgaaactgatgtttctgcatccagtggactatggccgcaaggccgaggagctgctgtgg
agaaaggtttactatgaagtcattcaggttatcaagaccaacaagaagcacatccacagt
cgcagtgctctggagtgtgcctacagaactcacctgatagccggcgtgggtttctaccaa
cacctgctgctctacatccagtcacattaccagctggagctgcaggattgcattgactgg
acccacgtcacagatccactgatagggcgaaagaaaccagtgtcagccacccccaaggag
atggagtgggcacaaatggcctgtcatcgctgtctggtctaccttggagatctagcgcgc
taccagaacgagcttgcaggagtggaggctgagcagctggcagagcggttttaccatcag
gcattgtcagtgatgccacacgtaggaatgccttttaaccaactgggcacactggcaggg
agcaagttctacaatgttgaagcaacttactactacctacgctgcattcaatcagatgcc
ccctttgagggcgcctacggcaacctgaaacgcctgtttgacaaagctgccaagatgtat
catcaagtaaagaaacaggaaatgaagaagttgtctccctctcgacaaagatcgaaagac
attaaacggctcctggtgagcttcatgtatctgcagagcctgctgcagcccaagaacagc
ccgatggaaacggagctgacttcactctgccagtcggtgctggaagacttcaacttggtg
atgttctacctgccaccgccaacacatggcggtgctcaccacacccctagtgaggaagaa
gaggagcagcagcagcacagtgacagctcctatcctgtgctgcctgacaacctcatcttc
aaaatggtggtcacatgtctgatggtagtgcacagccttaagagaggaggttcaaagcag
tacagtgcgtccatagcattcactctggccctcttctcccaccttgtaaaccacgtcaac
atccggctacaggctgaactggaagaagcagagagtcaggtgcctccacttcagactgac
gctgcagatgatctggacatgaaggatacgaccgctgcaccgacagatccctctggtgaa
aggcctttgcaaaatggttccctggagcaagaggatgaggaggataaggatgaagatggc
tctgaaagggttgcagccaacaagcacggcagcatagaagaacaacgcaagatgaacgaa
gagaagcagaggcagaagaagaagtacagccgcctttctagactccgccgtcgccgctgt
gctcgcaaagactgtcacggagaggatgaaagtgacttgagcgaaggcttcgagagtgaa
gaagaagaagatgacgatgaagaaagaaagggccgtgctgattcaacgggtgggaccaca
acaggaacgccagtcagcttgtcatctgtgaagaaggagcccaagagagatgccttgggc
gaggagggcagctggggaagcggctccgaggaagaggaggaggaggaaggaggaacagcg
tttgatgtagaaactgattcagacatgaacagtcaagagtctcgctcagacctagaagac
atagaggacacggaaaactctgaaaactcagagggtcacgtccgggagcaccaggatgac
gaagatgaggaccaaccaaaggaagtcggaggagagagagataccaccgacacccctccg
accaccaatgggcctctcatgtccagtgactccagcattaccagtaacctgcaggccatg
tcttctcagctcttccaggctaagagatgctttcgcctggcaccaacattcagtaacatg
cttttaaggcctcatgcttcgtcgtcctcaagtattccaacccctactgacagctcagct
cccccctcccaagagactcctcctcctcctcctggagattccccctgtgaaatgaacccc
ggtactgccaatggaaccagtgaaaatgacttggactctgattcggaaggaagtcaacac
agcactcagtcagtacatagtgaaaaaaccctcttagagaaactggagattatgaccaat
caggggttaatccaagttgttaaggtgtttctagactggctacggacaaataccgatatt
atcctcatgtgtgcgcagagttctcaaagcctgtggaaccgactgtctgtgctgctcaac
ctgctaccagatggcagcaagatgctcgaggctgagctcggtctgaacgctgaagtgaca
gagttgttaaatgagtgtgagcgaccggatttggtccagagtctgctgctgcctgaggat
ctggctctgcgacacctgcctgctctcagtgtagcccaccgccgccttgatttttcctgc
cgcaacccctccctcagtcccctacaagagtgtgtggtacgagtgtgttgtattcgcagc
tttggccacttcctgacaagtctccaaggcaacgtgctgcacttcaacccagaggcgggc
atcttcaccagcattagtcagtccaaacaggataatctggtgcagcaggccaaggcccag
tttcgcatggctgaagaggaggctcgtcgaaatcgattaatgagggacatggcccagctt
cgactacagttggaggtgtcgcagctagagggcagccttcagcagcctaaagcccagtca
tccatgtctccctacctggtgccagacacagctgctctgtgccagcatctgaacctcatc
cggcagctggctggtagcggctgctttatcatcatcatcccacgaacagtgattgatgga
cttgacaggttaaagaaggaaaatgctggtgcgagggatggaatccgcttcctggagtct
gaatttcgtaaaggcaacagatacatccgctgccaaaaggagtcaggtcgaagttttgaa
agagataagctgaagcggcaggacatcgaagcctggcatctgtacaagatggtggatagt
tgccgtcagctaacagtctcccagagcaacggagatgaagatacagccggtatggtgacc
attcttacaggccatgaagtggaggagctttgctctcggtcagcagcgatgaaggcggca
atccaggcgactggctcggcaggtatggagctgaagaacattgtggagttctaccgtcag
tggaaggagattggctga
DBGET
integrated database retrieval system
