Oreochromis aureus (blue tilapia): 116315467
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Entry
116315467 CDS
T07295
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X11
KO
K15516
fragile X mental retardation protein
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116315467 (fxr1)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116315467 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
116315467 (fxr1)
mRNA cycle factors
Stress granule specific factors
116315467 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
Agenet
KH_1
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
116315467
NCBI-ProteinID:
XP_031589645
Ensembl:
ENSOABG00000005543
LinkDB
All DBs
Position
LG17:30908684..30924195
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AA seq
688 aa
AA seq
DB search
MEELAVEVRGSNGAYYKGFVKDIHDDSLTIAFENNWQPERQVPFSDVRMPPPADVKKEIG
EGDEVEIFSRATELEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNTNKA
ITKNSFHKCFVPVPQDLQEACQSENAHKDFKKAVGASHISYCPETSQLVIVSTNETTVKR
VSLLSDMHLRSLRTKLLLMSRNQEATKHLENSRHLVSSFQEEFTVRLDLMGLAIGSHGSN
IQQARKVPGVTAIELDEESGNFRIYGETAEAVKKARGFLEFVEDSVQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDTKQPRQEGMVPFTFVGTKESIGNVQVLLEYHISYLNE
VEQLRLERMQIDEQLRQITQGHRPVDRDRGERGERGGGYNTENNANASSTSVHGSRSYNS
RGRGRRGHNYSTGYGNTSEQSNASETDSERKDELSDWSLAGEDHDRERERGPRPQRDGRR
RPGPGRGRGRGRGGRGSYSNSSAGPRDPEDNHHYGALEVNTETDQTADTDASDSNLPANR
RRRSRRRRTDEDTTLIDGMSESDNASMSENGTDDQEAKPQRRNRSRRRRNRLPEERQPVT
VADYISRAESQSRQTIGKDSQKNKDVGQVDVIAEHSPNSAVATTNGSNGAADGDDNNGAR
ASRSSTEKSTKVSYKGESNPQAVVNGLS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggcggtggaggtccgtggctccaacggggcttattacaagggctttgtc
aaagatatccacgatgactctctcaccattgcctttgagaacaattggcagccagaacgc
caagtgcccttcagtgatgtcaggatgcccccacctgctgatgtcaagaaggagattgga
gagggtgacgaggtggagatcttttctagagccactgaacttgagccgtgtggttggtgg
ttggctaaagtccgcatgatgaagggagatttctatgtgattgagtatgcagcctgtgat
gcgacttacaacgaaatagtgacctttgaacgtctgcgtccggtcaacaccaacaaggcc
atcaccaagaactcctttcacaagtgctttgtcccggttcctcaggatctacaagaagcg
tgccagagtgagaatgctcataaagacttcaagaaagccgtgggagcctctcacatctca
tactgccctgagaccagccaactagtgattgtgtccaccaacgagacgacagtgaagcgt
gtgtctttgctgagtgacatgcacctgcgcagcctcaggaccaagctacttctaatgtca
cgcaaccaggaagccacaaaacaccttgagaactccaggcacttggtgtcttccttccag
gaggagtttacagtgagactggatctaatgggcctggccattggcagccatggcagcaac
atccagcaagcccggaaggttccaggtgtaactgccattgagctggatgaggagtcaggc
aatttcaggatttatggggagacagcagaggcagtaaagaaagccagaggcttcttggaa
tttgtagaggattcagtccaggtgccaagaaaccttgttggcaaagtgattggtaaaaat
ggtaaggtcatccaggagatagtggacaagtccggtgtggtgcgtgtcaggatagaagga
gacaacgataccaagcagcccagacaagaaggaatggtcccattcacatttgtcggcact
aaggagagcattggcaacgttcaggtcttgttggagtaccacatctcctacctaaatgag
gtggagcagcttcgtctggaacggatgcagattgacgaacagttgcgtcagattacccag
gggcaccgaccagttgacagggacaggggagagaggggggagagaggaggcgggtataat
acagaaaacaatgccaatgcctcctctacgtccgtgcatggcagtcgctcttacaacagc
cgaggacgtgggcgcaggggccacaactacagcactggatatggcaacacctcagagcag
tccaacgcctctgagacagattctgagcgcaaagatgagctgagtgactggtctctggct
ggagaggatcatgacagggagcgggagagaggcccacggccacagagagatggccgcaga
aggccaggacccggccgaggaagaggaagaggacgaggaggaagaggaagttacagcaac
agctctgcagggcctcgagaccctgaggacaaccatcactatggagccttggaggtaaac
acagagactgatcagacagctgatacagatgctagcgactccaacttgcccgcaaaccgc
cgcagaagatctcggcgacgcagaacagacgaggacaccactctgattgatggcatgagc
gagtcagacaacgcctctatgagtgaaaatggaacagatgaccaggaagctaaacctcaa
cgtcgtaatcgtagccgacgtcgcagaaaccgtctgcctgaagagaggcagccagttact
gtggctgactacatatccagggctgagtctcagagcagacagacgatcgggaaggactcc
cagaaaaacaaggatgtgggtcaggtggatgtcatcgctgaacacagcccaaactctgcc
gtggcaaccactaatggttctaacggtgcagccgatggcgacgacaacaatggcgcaaga
gcttccaggtcttccactgagaagtccactaaagtctcctacaagggggaatctaaccca
caagctgttgttaatggactctcctag
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integrated database retrieval system
