KEGG   Oreochromis aureus (blue tilapia): 116315492
Entry
116315492         CDS       T07295                                 
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03013  Nucleocytoplasmic transport
oau03015  mRNA surveillance pathway
oau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116315492 (ncbp2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    116315492 (ncbp2)
   03015 mRNA surveillance pathway
    116315492 (ncbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116315492 (ncbp2)
   03041 Spliceosome [BR:oau03041]
    116315492 (ncbp2)
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     116315492 (ncbp2)
Spliceosome [BR:oau03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    116315492 (ncbp2)
SSDB
Motif
Pfam: RRM_1 RRM_10 RRM_occluded
Other DBs
NCBI-GeneID: 116315492
NCBI-ProteinID: XP_031589679
Ensembl: ENSOABG00000016762
LinkDB
Position
LG17
AA seq 164 aa
MSVKLNALNSDSYIDISQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVHELFS
KSGDVKRIIIGLDKIKKTACGFCFVEYYTRADAEHAMRFINGTRLDDRIIRTDWDAGFKE
GRQFGRGKSGGQVRDEYRQDYDPARGGYGKLAQQHRPTEGRNSF
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtctgttaaactaaacgcgctaaacagtgattcttacattgacattagtcaatacaga
gaccaacactttaagggtaatcgctatgaacaggagaagcttctgaagcagagcaacact
ttgtatgtgggcaatctctccttctacaccaccgaggagcaggtacacgagctgttttct
aaaagtggagatgtcaagcgtatcatcattggcctcgacaaaatcaagaagactgcttgt
gggttctgctttgtcgaatactacacccgtgcagatgcagagcatgccatgcgcttcatt
aatggcacacggctggatgaccgcatcatcaggacagactgggatgccggcttcaaggag
ggaagacagtttggtcgtggcaaatcaggaggacaggtgagagatgagtacaggcaggat
tatgatccagcgagaggcggttatggtaagctggctcagcagcatcgacccacagagggg
cgcaatagtttttag

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