Oreochromis aureus (blue tilapia): 116315710
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Entry
116315710 CDS
T07295
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116315710 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116315710 (cnot3a)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116315710 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116315710 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
116315710
NCBI-ProteinID:
XP_031589954
Ensembl:
ENSOABG00000015322
UniProt:
A0A668U5V9
LinkDB
All DBs
Position
LG11:21667957..21681525
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AA seq
913 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRFHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNVEDEVYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGGIPAVPTSSSLIGSFSSAVQQHQHQP
AQQQQQNCQPPNQSQQQQQQPPQTKPSVPSNNTPSPPSNPLLPTSTAPSLPTPNTSTSSV
PNSQSQSTSGPTSASSLGLGLGLGLSKGGMTGTSSANQMPGLGMGGHPAPLNTMAGLISG
STPAPYAQAAASGGLGLSSTTQSSISAESSTSIPTSGSSGVTTNGAGTGLGLLGSSPAHN
SLSGNILGLVPGQSVPPGTSQVPPSSVSSTPGVVGMMGGNGGNVGVVGGVGVNSVPARPP
SGLKQNGSTSYSAVVAESSTESALSTPNQSQSSQPSSLSSSTSQPMDNGPSLISSITLPP
SSPSPSFSDSTPGGGSLLNGPHSFSQASEGLKAPEPLSTLKAMAERAALGSGLDGEISNL
HITDRGRNDIFSGSSAAPGTPAAPQPSVTEVNIPPSLGVCPLGPTPLPKDQLYQQAMQES
AWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEG
TKAQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGF
TFEYRYLEDRDLQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgaaatcgatagatgtttgaaaaaagtagctgaa
ggtgtagaacagtttgaagatatctggcaaaagctccacaatgcagccaatgcaaatcag
aaggaaaaatatgaggctgacctcaagaaagagattaaaaaacttcagcgattgagagat
cagataaaaacatgggtggcctcaaacgagatcaaggacaaaaggcagctagtcgagaac
cgtaaacttatagaaacgcaaatggagcggttcaaagtggtggaacgtgaaacaaaaaca
aaagcctactctaaagaaggcttggggcttgctcagaaagtggatccagctcagagggaa
aaggaggaaacgggacagtggctaacaaatacaatagacactctaaatatgcaggtggat
cagtttgaaagtgaagtggaatctctttcagttcaaacaagaaagaagaagggtgataaa
gagaagcaagatcgtattgatgagctcaagcggttgattgagagacatcgattccacatt
cgaatgttggagaccattttacgaatgctggacaatgactccgtgccagtggatgcaatc
caaaagatcaaggatgatgttgaatattacattgactcctctcaagacccagactttgag
gaaaatgagttcctgtacgatgacttagacctggaggacatccctgcagcgttagttgca
acttctccatcgggccagggcaacgtggaagacgaggtgtatctccactctagtagcact
cccacttccaccacctcttcttcacccatccctccatccccagccacttgcactgctgag
aattcagaggacgataagaaaaggggacggtcgacagacagtgaagttagtcagtcacct
gtgaagaatggcaccccatccttgctatcatctttctcttcttccaccacctctgggtcc
tcctcatcctcctcccttgtgtccatggcgagtgttgtcggagggattcctgcagtgccc
acgagcagcagtcttataggaagcttcagcagtgcggtgcagcaacatcagcatcaacct
gcacaacagcagcagcagaattgtcagccgccaaaccagtcgcagcagcaacagcagcag
ccacctcagacgaaaccctcagtcccttcaaacaacacccccagcccacccagcaaccca
cttctcccaacgtctactgccccctctcttcctacacccaacacatccacttcatcagtt
cccaattctcagtcacagtccacatctggacccacatcggcatccagtttgggacttggg
ctgggcctgggattgagcaaaggtggcatgactgggacaagcagtgccaatcaaatgcca
gggctagggatgggtggccaccccgctcctttaaacacaatggcagggctcatttcgggt
tcaacacctgctccttatgctcaggcagcagcatccggaggcttgggtttgagcagcacc
actcagtcaagcatttcagcagagagcagcacttccatacccacctctggctccagtgga
gtcaccaccaacggggcaggaacagggcttggtttgctgggttccagtccagcccacaac
tctctgagtgggaatattttgggtctggttcctgggcaaagtgtgccccctggtacctct
caggttcccccaagttctgtcagctctaccccaggagtagttggcatgatgggaggcaac
ggaggaaacgttggtgtggttggaggagtaggagtgaattctgttcccgctagaccacca
agtggactgaagcaaaatggaagcacaagttacagtgctgtggtggcggagagttccaca
gaatcggctctaagcacaccgaaccagtcacaaagcagccaaccctcatctctcagttcc
tcaaccagtcagccgatggacaatggtcccagtttaatcagctccatcaccctgcctccc
agttctccgtccccctcgttctcagacagcacaccgggtggagggagtcttctcaacggg
ccccactccttttcacaggcctctgaagggctaaaggcacctgagcctctcagcactctg
aaggcgatggcagagagagcagcgctgggatcaggcctggatggcgagatttccaacctg
catataacggacagaggtcgaaacgatatcttctctggttcatctgcagcacctggcaca
cctgccgcacctcagccgtccgtgacagaggtcaacatccccccatcgctcggtgtctgt
ccactgggcccaacccctctccccaaagaccagctctaccagcaggcgatgcaggagtcg
gcatggacgcacatgccccacccctctgactctgagaggatcaggcaatacctgatgagg
aatccatgtcccaccttgcccttccatcatcaggtcccacctcatcactctgactccatt
gagttctaccagagactgtccacagaaactctcttcttcatcttctattacctggagggt
accaaggctcagtatctgtctgccaaggctctgaagaaacagtcctggaggtttcacacc
aagtacatgatgtggttccagaggcacgaggagccgaagaccatcaccgatgagtttgaa
cagggcacttacatttactttgactacgagaaatggggccagagaaagaaggaggggttc
accttcgagtacaggtacctcgaagaccgagacctgcagtga
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