Oreochromis aureus (blue tilapia): 116315728
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Entry
116315728 CDS
T07295
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116315728 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116315728 (irf1b)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116315728 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
116315728
NCBI-ProteinID:
XP_031589984
Ensembl:
ENSOABG00000005118
LinkDB
All DBs
Position
LG10:complement(23598131..23602001)
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AA seq
295 aa
AA seq
DB search
MPVSRMRMRPWLEKMIDSNTIWGLAWIDKEKTMFSIPWKHAARHGWEVDKDACLFKEWAK
HTGKYAEGQVCDPKTWKANFRCAMNSLPDIEEVKDKSINKGHQAMRVFRMLPASQKSKDK
RTKSRESKGRKKSSVVKMEEREDSYSDTQSPIPALMPESTQENRVDSTVQTDQPDFFFPS
DVPEWSSTVEIGPDSFANRFQVSPVHSSDYDYPEDIIEICRKLEKETSHWMTTSSLDDRG
FLSNEPCTSPGSQWSESSSVDEVDDTRPQYTTLADIPNSTDEFWNSFCQQMPLLL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtcaagaatgaggatgaggccatggctggagaagatgatcgactccaataca
atttggggactggcttggattgacaaggagaaaacaatgttttccatcccctggaagcat
gcagctcgacatggctgggaggtggacaaagacgcatgtctgttcaaagagtgggccaaa
cacacagggaaatatgcggagggccaagtttgtgaccccaagacatggaaagccaacttt
cgctgtgcaatgaactcactgcctgacatcgaggaggtgaaagacaaaagcattaacaaa
ggccaccaagctatgcgtgtcttcaggatgctgcctgctagtcaaaaatctaaagataaa
cggactaaatcaagggagtcaaagggaaggaagaagagttcagtggttaagatggaagag
agggaagacagctacagtgacactcagtctcccatccctgcactgatgccagaaagcaca
caagaaaacagagttgacagcacagtgcagacagaccagccagatttcttctttccatct
gacgttcctgaatggtcttcaacagtcgagattggccctgactccttcgccaacagattt
caggtttcacctgttcacagctccgactacgactatccagaagacattattgagatttgc
agaaaactggagaaagaaacttcacactggatgacaacaagcagtttagacgacaggggg
ttcctgagcaatgaaccatgcaccagtccagggagccagtggagtgagtcttcatcagtc
gacgaagtagacgacacacggccacagtacacaactcttgcagacatcccaaattccaca
gatgaattctggaacagcttttgccaacagatgccacttttgctttaa
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integrated database retrieval system
