Oreochromis aureus (blue tilapia): 116315819
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Entry
116315819 CDS
T07295
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116315819 (chd1)
03036 Chromosome and associated proteins [BR:
oau03036
]
116315819 (chd1)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116315819 (chd1)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
116315819 (chd1)
SLIK complex
116315819 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
CHDCT2
Motif
Other DBs
NCBI-GeneID:
116315819
NCBI-ProteinID:
XP_031590094
Ensembl:
ENSOABG00000015616
UniProt:
A0A668UU58
LinkDB
All DBs
Position
LG7
Genome browser
AA seq
1792 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDTEKSKEKIEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQRQS
SSNSASDEDSSSSDESDSSSGSKMRRKSGSSDSGSGSESGSGSGSDSSAEESETASDYEP
SHKIKSRKPPTKMNFRNGKKSNTQRKKAQKSSSSDDEDDNFKKITSGGPRRQATVNISYK
EDEELKTDSDDLVEVMGEDVPQPEEDEFETLERVMDSRIGRKKATGSSTTVYAIEADGDP
NANFDPNKEAGDIQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKDQEKKKWL
KAASPEDIEYFNCQDELMDDLRSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSW
EDGGLIAKKFQKCIDDYMSRNQSKTIPFRDCKVLKQRPRFVPMKKQPAYIGGDGLELRDY
QLDSLNWMAHSWCKSNSCILADEMGLGKTIQTICFLNYLFNEHQLYGPFLLVVPLSTLTS
WQREIHLWAPQMNVVVYLGDISSRNMIRTHEWMHSHSKRLKFNILLTTYEILLKDKSFLG
SVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEK
FHSWELFEDEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQ
YYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNRAEALQHLI
RSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLRSRQFLFQRLDGSIKGEMRK
QALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK
RQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKEE
LSAILKFGAEELFKEQEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANF
SMMEDEEIDIDSERSQRSWDDIIPEEQRRRMEEEERQKELEEIYMLPRMRNCAKQIYQNA
NEGRQSRNRRYSGSDSDSTSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGP
LERLDAIARDAELVDKSEHDLKRLAETVHNGCLRTLRENPCGPEKNSGGRRGKVKGPTFR
ISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYVIPCHSKAAHFDIEWGKEDDSSLLI
GIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQ
KQAGNASSRKRKPRSKKSKTQKSTKTDEMVKSPSSDLPSDKRSDDEDEMEADKDLAPVKL
PNRRSRADRLVVKEEEDEEDDEEENYDEECEQDASSSEEQEVKEREIKKEIKKEKKEESF
EIKDTKELKEKKETKPLEVVHKQEESKEKNEAKNEVRERTKKTYDTPVHITASGENVQAS
EDSEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLK
EYSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAVKKRQENAQALEQNTRSINAHGY
RHADIERLKDSSHQDESSRDSYSSDRHQPSGRHFESSTSKERHSSDSHRKSTAGESRKRP
YSSFSNGKDHRDHYRPDSRDRDKQDRYYDDSKHRKLEEFRSSRDHRLDMKDHHSDHRSSY
RYHSEWQTEQRGSASGPRSPYDSRSPLGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaggatgaaagtgtaagcaacagcagtggagaatccagtaattct
gatgatgaatccggttctggatcgggctcagcttcaggatccggctcaggctcgagttcc
agctcttccagcagcagcagccaatcagggagcagtgactcaggaagtggctcagactct
ggcagccaatccgattctgacacagaaaaatcaaaggagaagatcgaaccaccaaataag
tcaaacattgatggagctgagttctggaagtcaaacccaagtatcctagcagtgcaaaga
tctgctatgctcaggaaacagcagcttcagcagcagcagcagcaacaacagagacaaagc
tcatcaaatagtgcatcggatgaggactcttcaagtagtgatgaatctgactcctccagt
ggatccaaaatgagaagaaagtcaggttcttctgactctggatcaggttcagaatctggt
agtggttctgggtcagactcatcagcagaagagtctgaaacggcatcagactatgagcca
agtcacaaaatcaaaagcaggaagcctccaaccaagatgaactttcgaaatggaaaaaaa
agcaacacccagagaaaaaaagcccagaaaagttcatcatctgacgatgaggatgataac
tttaagaaaattacatctggagggccacggcggcaagccacagtcaacattagctataag
gaggacgaggagctgaagacggactcagatgatctggttgaagttatgggtgaagatgtt
ccacagcctgaagaagatgagtttgaaacactggagagagtaatggacagcaggataggg
aggaaaaaagcaacaggcagttcaacaactgtatacgctatagaggcagatggagatcca
aatgcgaattttgatcccaacaaagaagctggtgatatccagtatttgataaagtggaag
aactgggcccatatccataacacctgggagactgaggagacactcaagttacagaatgtc
aagggcatgaagaaattggacaattttaagaagaaggaccaggagaagaaaaaatggttg
aaggcagcgtctccagaggatattgaatatttcaattgtcaggacgaattaatggatgac
ctgcgttctcagtaccagcttgtagagcgaataataggacattcaaaccagaagtcagca
gctggttatccagactacctgtgcaaatggcagggcttaccgtactcggagtgtagttgg
gaagatggtggtctgattgctaaaaaattccagaaatgcatcgacgattacatgagcaga
aaccaatctaagaccattccattcagagactgcaaggtgctgaaacagagacctagattt
gtgcccatgaagaagcaaccagcttacataggaggtgatggtttggagctcagagactac
cagttagacagtttgaactggatggcccactcctggtgcaaaagcaacagttgcatcctt
gctgatgagatggggttagggaagacgatccagaccatctgcttcctgaactacctgttt
aatgagcaccaactgtatgggcccttcctgctggttgtgcctctttcaacactaacgtct
tggcagagagagatccatctgtgggcccctcaaatgaatgttgtggtctacctgggagac
atcagcagcaggaatatgatcagaacacatgagtggatgcattctcacagcaagagactg
aaatttaacatcctccttacaacatatgagattctcctcaaagacaagtcatttttgggc
agtgttaattgggccttcattggtgtggatgaggcgcaccgactgaaaaatgatgactcc
ctcctctacaagacaatgatcgacttcaagtccaaccacaggcttctaataacaggaaca
ccactgcaaaattccctgaaagagctctggtccctgctgcacttcattatgcctgaaaag
tttcattcgtgggagctgtttgaggatgaacatgggaaaggtagagactctggctacacc
agtcttcacaaagagctggaaccttttctactgcgccgtgtcaagaaggatgtggagaaa
tctcttccagctaaagtggagcagatcctcagagtggaaatgagtgccattcagaaacaa
tattacaagtggatcctaacaaggaactacaaggctctgagtaaaggtaccaaaggcagc
acgtcaggtttcctcaacatcatgatggagttgaagaagtgctgtaatcactgttacctt
attaaacctccagaggacaatgagttccttaacagagctgaagctttacagcatctgata
cgcagcagtggaaagctggttctcttggacaaacttttggtgcgtttgaaagaacgggga
cacagagttctcatcttctcccagatggtacgaatgcttgatatcctggctgaatatctg
aggagcagacagttcctgtttcagcgattagatggctccatcaaaggggagatgaggaag
caagcattggaccactttaatgctgagggttcagaggatttctgcttcttgttatctaca
cgtgctggaggactgggcatcaatctggcttcagctgacacagtggtcatctttgactca
gactggaacccccaaaatgacctgcaggcgcaagccagagcccacaggattggacagaaa
agacaggtgaatatctaccgactggtaacaaagggttcagtggaggaggacatcattgag
agggcaaagaagaaaatggtgctagaccatcttgttattcagaggatggatacgactggg
aaaactgtcctccatacaggatctgctccgtccagttcagcaccattcaacaaggaggag
ctctctgcaatcctgaagtttggggctgaggagcttttcaaagaacaagagggggaggag
caagagcctcaggaaatggacattgatgagatcctcaaaagagctgagaccagggaaaat
gaccccggaccttcaacagtgggagaagaactgttgtctcagtttaaggtggccaacttc
tccatgatggaggatgaggaaatagacatcgactctgagcgaagtcagcggagttgggat
gatatcattccagaggaacaaaggaggagaatggaagaggaggaaagacagaaagagctg
gaagaaatctatatgctaccacgcatgaggaattgtgccaaacagatttatcagaatgca
aatgagggtcggcaaagtagaaacaggagatactctggttccgacagtgactccacatct
gatcgaaagaggccaaagaaacgagggcggcccagaaccattccaagggaaaatatcaaa
ggttttagcgatgctgagatccggaggtttgtcaagagctacaaaaaatttggaggacca
ctggaaaggttggacgctattgctcgtgatgctgaactcgtggataagtctgagcatgac
ctgaaacgcttggcagagactgttcacaatggatgtttgagaacactacgagaaaacccc
tgtgggccagagaaaaattcaggggggagaagagggaaggtgaaaggccctacgttcagg
atctctggagtccaggtgaatgccaagcttgtgatctcccatgaggaagagctggctcca
ctgcacaaggctattcctgctgacccagaggagagaaagaagtatgtcattccatgtcac
tcaaaggcagcacattttgacattgagtggggaaaggaagacgactctagcctcctcata
ggaatctacgagtatggttatggcagctgggagatgattaagatggacccagaccttaat
ctcacacacaagctcctgccagatgaccctgacaagaaaccacaagccaaacagttacag
accagagcagactacctcatcaagttactgagcaaggacttggccaaaaaagaagcacag
aaacaagcaggaaatgccagctcacgaaagaggaaacccagaagtaaaaagagcaaaact
caaaagtcaacaaagacagatgagatggttaagagcccatcctcagatctcccatcagac
aagaggtcagatgatgaggatgaaatggaggcagacaaggatctggcacctgtgaagcta
ccaaaccgacgaagccgagcagacaggttggtggttaaagaggaggaggatgaggaagac
gacgaggaagagaactacgatgaggaatgcgagcaggacgcttcctcatcagaggagcag
gaagtcaaagagagggagataaaaaaagaaatcaaaaaggagaagaaggaggaaagcttt
gaaattaaagacacaaaggagctaaaagagaaaaaagaaacaaaacctcttgaggttgta
cataaacaagaggaaagcaaagaaaagaatgaagccaagaatgaggtacgagaacggaca
aagaaaacttatgacacgccggtccatataacggctagtggagagaatgtgcaagcatct
gaagattctgaggaactggatcagaggacctttagtgtgtgtaaagagaggatgcgccca
gtgaaagcagctctgaagcagctggacagaccggagaaagggctgtcagagcgcgagcag
ctcgaacacacacggcagtgcctcataaagataggagaccacataaccgagtgtttgaag
gagtattcaaatccggacctgatcaaacagtggagaaaaaacttgtggatatttgtttcc
aaattcactgagtttgatgcaagaaaactacacaaactttataagcatgcagtaaagaaa
aggcaagagaatgcccaggcattggagcagaacactagaagtataaacgcccatggctac
agacacgcagatattgaaaggctaaaggacagctctcaccaggacgagagcagcagggac
agctacagctctgacaggcatcagccttcaggaagacactttgagagcagcacgagtaag
gagagacacagctctgactcccacaggaaatccacagcaggagagtcccgaaaaaggccg
tattcctctttcagcaacggaaaagaccacagagaccactacagaccagacagtagggat
agagacaaacaggacagatactatgacgacagtaagcacaggaagttagaggaattccgc
agtagcagagaccaccggctggacatgaaggatcatcactcagaccaccgctcttcctac
cgctaccactcggaatggcagacagagcagcgaggctcagccagtgggccgcgctcaccc
tacgactcccggtcaccactggggcaccgctcaccttttgactactcatcagaccacaag
agcacaccagagcagatttggagcagccgcaaaacataa
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integrated database retrieval system
