Oreochromis aureus (blue tilapia): 116316009
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Entry
116316009 CDS
T07295
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
oau
Oreochromis aureus (blue tilapia)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
116316009
NCBI-ProteinID:
XP_031590320
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Position
LG16:22489571..22492795
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AA seq
733 aa
AA seq
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MPPLLAPLFLLQLVVLTFVSGGAYYGHKQHPQPYQPMQHIQHIGMGKDMPYVQYPHYSKE
LPPMPMHKGKENAHKGGSYNGGKDKGQTIPSGAEGIPQGEPGPAGPPGPPGPQGPPGPPG
PPGNGLPGPAGRPGPPGPPGIPGVGKPGFPGLPGKPGGTGIAGPQGEIGPRGEEGPPGQS
GPQGPPGPPGLPGIGKPGVQGLPGQVGPKGEPGHKGLPGLPGLPGPKGDKGMGLPGPPGH
KGLPGLPGPAGPRGLPGFGKPGLNGTPGPQGPPGEKGHPGHQGPAGPPGEKGQPGPAGLP
GQGKPGQNGLPGQPGTPGAKGHPGPPGLPGKPGLPGFGKPGLPGPKGDKGMSGPPGSPGP
KGDKGYSGPPGMPGPSGPKGPEGHPGPTGPPGPMGAPGPKGDCGEEGPKGFDGAQGEPGP
QGLPGKDGLPGDQGEPGPRGPPGPIGAKGDIGPEGVPGVPGSSGPPGPKGERGEPGEVGP
QGPKGIPGMDGAAGPIGPPGLQGSKGDYGPPGPPGIAVEGSPGLPGPIGPPGKEGPSGPP
GQRGLPGPPGPPGPPGIPSVSPEMAGVLSEMGPGLDGVKAGSYGKKGKYGGNGAEVMGPS
GLEMPAFTAVAMTPFPPVGTPVIFDKLLYNGRQNYNPQTGIFTCEVPGIYYFAYHIHCKG
TNVWVALMRNNEPVMYTYDEYKKGFLDQASGSAVLPLQLGDTVYIQLPSDQASGLYAEQY
VHSSFTGYLLYPM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccttcttgcccccctcttcctgctacagcttgtagttcttacctttgtgagt
ggaggagcatactacggtcacaagcagcatcctcagccataccaaccgatgcagcatatc
caacatattggcatgggtaaagacatgccctatgtgcagtatccccattacagcaaggag
ctcccaccaatgcccatgcacaagggaaaggaaaatgctcataaggggggaagctacaat
ggtggcaaagacaaaggccagacaattcctagtggtgctgagggaattccccaaggagag
ccaggccctgctgggccacctgggccacctggaccacagggacctccaggacctcctggg
cctccggggaatgggttgccaggacctgcaggacgccctggacctcctggtccacctgga
attccaggagttggaaaaccaggctttcctgggcttcctggaaaacctggaggaactggt
attgctggccctcaaggagaaattggccctaggggtgaagaaggaccaccaggacagtca
gggcctcaaggacccccaggaccacctggacttccaggaataggtaaaccaggtgttcaa
ggtttaccaggtcaagtggggcccaaaggtgagccaggtcacaaaggtcttccaggttta
ccaggactgccgggacccaaaggagacaaagggatggggctgccaggaccacctggacac
aaagggcttccagggctccctgggcctgctggtccaagaggattgcctggttttggtaaa
cctggattgaatggcacaccaggaccacagggaccaccaggtgaaaagggacatccagga
catcaagggccagctggaccaccaggtgaaaaaggacagcctggcccagcaggtctacct
ggtcaagggaagccaggtcaaaatggtctaccaggacaaccaggcacaccaggtgcgaaa
ggtcatccaggaccaccaggtttgccaggaaagccaggattgccaggatttggtaaaccg
ggactcccaggaccaaagggtgataaaggtatgagcgggccacctggatcacctggacca
aagggagataagggttacagcggtccacctggtatgcctggaccttctggaccaaaaggt
cctgaaggtcatccaggccctactggacccccagggcctatgggtgcacctggtcctaaa
ggagactgtggagaagaaggacctaaaggttttgatggagcccagggtgagcctggtcct
caagggttacctggaaaggatggcctgccaggagaccagggcgagccaggaccaagaggc
ccaccaggaccaattggtgccaaaggagacattggacctgaaggtgtacctggtgttcct
ggttcttcaggacctcctggtcccaaaggagaaagaggtgaaccaggtgaagtgggaccc
caaggccctaaaggaatcccaggaatggatggtgcagcaggaccaattgggccccctggt
cttcaaggatcaaaaggagattatggtcctcctggtccaccaggcattgcagttgaagga
agtccaggtctacctggtcccataggacccccaggaaaagagggcccatcaggaccccct
gggcaacgaggtctgcctggccctcctggaccaccaggtccacctggaatacctagtgtg
tcacctgaaatggcaggagtgctttctgagatgggcccaggactagacggtgttaaagct
ggaagttatggcaagaagggcaagtatggaggcaatggggcagaagtaatgggtcccagt
gggctggaaatgccagcattcacagctgtagcaatgactccttttccacctgtcggcact
ccagtcatctttgacaagcttttgtacaatggtcgccaaaactacaacccccagacagga
attttcacttgtgaagtacctggcatttattactttgcctaccacattcattgcaaagga
actaatgtttgggtcgctttgatgagaaacaacgagcctgtaatgtatacatacgatgaa
tacaaaaagggtttcctagaccaagcatcagggagtgcagtattacctctacagctaggg
gacactgtgtatattcagctgccctcagatcaggcttcaggactttatgctgaacagtat
gtgcattcctccttcactgggtacttgttatatccaatgtaa
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