Oreochromis aureus (blue tilapia): 116316038
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Entry
116316038 CDS
T07295
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116316038 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116316038 (lmo7a)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116316038 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116316038
NCBI-ProteinID:
XP_031590350
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All DBs
Position
LG16:complement(22942152..22993624)
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AA seq
1429 aa
AA seq
DB search
MEWREQSSVSCEEAYSEAQSWIEAVTKKKFGSKDFRSALENGVLLCELINKIKPGVVKRV
NRLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSSRVTVKDQETSRRLKNVLIT
IYWLGRRAQCDRFYDGPYLNFKAFEGLLGTALYKALQESSSQKSSNVRDSGFGDSWYSER
EELSHLRGGGGGGGGRHRRDDSLDSLDSLGSRPHSIASDTTLKGSSEGCFSDTEADSVFK
MTENKDNLSYRRSAVVAPKTTTQFNQFLPTKDKASGYVPAPLRKKRAERNEDNRRSWASI
SFAEDESSLTRERQESTDGSKSTSDMLVDPAVNRQARYEELQKYREQVKQSEDKWQDALN
DWKSRRRSVNSDIVKKKEEREKIEQITYGGEKRSKTFKEMQEEREGKRKSSVGSRLGSLS
FLDDDDDNVFEKPVIVPRTRAPPSRSYTIDTSQFSYEPPKPSVNDKEPPIASPATGRAAS
PPTSLEVVDSPALSSSITNTITPNNYSSFNRSPSPEAVPLQRSTDSERASTAKKQEAPTV
VSSSSSLPKVPEPSTALSGTRTEVKPPSSGPLHTQAQPSSMEPKPPAMSRVSSSLPKTYQ
RSDSARLTSVVTPRPFGSQPSRITSLPRGFTPAQTDDSHKRVNGNVDVSKKSSVPSRYHQ
FMTSEDEALSSSAHSSEEEEEEEEATTGKSVNSALSVSPVPPQVKSEPPAPAKETSQENY
CEMRISLNQKPNSSRDFGFQAVWDSTGACVTSIQPGSPAEMCQLQTGDKVLTVNGHKVAD
LSYTEWKSHMDEALQEGSLVMDIRRHGQNNWDRVQPSLPFKSHKTINLTSTDHPMLVGPQ
EKSTVSSSLDFTSNTPAETLTFKETPAHPVSEVASNGVNGGFREEPVTMRKKESEPLSLK
NLKRRSEFFEQGGGSEPAVPDIPVPVITPSSRWSWDPEEERKRQEKWQKEQERLLQEKYK
RDQEKLQEEWLKAQQAISTSMVPKQPGSLKVNNHSTGPHSPLSPVNQPTSLLWEEEERKR
KEEQERQRQAEEKRKREEEERELQRLQEERMRKERQEQEERKRREDERRLLEAEEQQRRE
KERAFEQQQQWATSSHGFPYAQPSLTYADRTKSKSSPQLDEEDRPQRKGVHVHHGGMAQR
LLEEQLKNAQDRVYQSQRAASELELERRNILHAMRYREPERVTSSGAAEKKDQQPASQAE
LERQQILNEMKKKTSLLTDNSWIRQHSPDTSTNKERALPPMRRGDSLDNLDTSYNSWRSS
SKPRSGSFAQNYSRPHSALSGNTSFYGGGLRAQRYGSTSTLPSSYSMGSLRSGAGSHLVP
WSRQSPSPSSSSSPTTSPDPMAEADAPQQRSRSVSGKKICTFCESPLGKGAAMIIESLGL
CYHLGCFKCIDCKSDLGGSEAGAEVRIRNKQLYCNSCYMRVKTGQPTSM
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtgagcagtcttctgtcagctgcgaggaagcctactcggaggcgcagagt
tggattgaggcagtaaccaagaaaaaatttgggagcaaggacttccgatctgcgctggag
aatggcgttcttctgtgtgaactgattaacaagatcaagcctggtgttgtcaagagggtt
aacagactgcctactcctattgctggactggacaaccttaacgtcttcctcaaggcctgc
gggaagcttggactaaaggaagcgcagctctttcaccccggagatcttcaagacttgtcc
tcaagagtcacagtcaaggatcaagagaccagcaggaggctgaaaaatgtattgatcacc
atttactggttaggtagaagagctcagtgtgaccgcttctatgatggaccttacttgaac
ttcaaggcatttgagggtttattgggcacagcactatacaaggctctgcaggaatcttcc
agtcagaaaagcagcaacgtccgagacagcggttttggagacagttggtactctgagcga
gaggagctctcccatctgagaggaggaggaggtggaggtggtggtagacacaggagggac
gactccctggacagcttggattcgttgggttcccgaccccacagcatcgcatctgacacc
actcttaaaggcagcagcgagggttgttttagcgataccgaggcagactctgtcttcaag
atgaccgagaacaaggacaatctcagctaccgccggtcggcagtggtcgcgccgaaaacc
accacgcagtttaaccagttcctgcccactaaagacaaagcttctggctacgtgcctgct
ccactaaggaagaaacgggccgaacgtaatgaggacaaccggcgcagctgggccagcatc
agtttcgcagaggatgaaagctctctcaccagagagcgccaagagagtacagacgggagc
aaatcaacaagtgatatgctcgtcgaccctgcggtcaaccggcaggctcgctacgaagag
ctgcagaagtatcgtgagcaggttaagcagagcgaggataagtggcaggatgccctgaac
gactggaagagccgacgtcgcagtgtcaactctgatatagtaaagaagaaggaggaaagg
gagaagatagagcagattacttacggcggtgagaaaaggtctaagaccttcaaggagatg
caagaggagagagaaggtaaaagaaagagcagtgttggcagccgtctcggatctctctct
tttttagacgacgacgacgacaacgtatttgaaaaacccgtcattgtcccacgtacccga
gcgcctcctagcagaagctacacaattgacacttcccaattttcctatgaaccccccaag
ccctctgtgaatgacaaagaacctcccatcgcttccccagctaccggcagggctgcttcc
cctcccacttcacttgaagtcgtggacagtcccgcactaagcagctccatcacgaacacc
atcactccgaacaactacagctcattcaaccgctccccgtctccagaagctgtacctttg
cagaggagtacagactcagagcgcgccagcacagccaagaagcaggaggccccaactgtt
gtctcctcttctagctccctaccaaaggtgcctgagccaagcaccgcattgtcgggcaca
cggactgaggtgaagcccccctcttctggtcctttgcacacacaagcacagcccagctca
atggaacccaagcctcccgcgatgtctcgggtttcttcctccctgcctaagacctaccag
agatcggatagcgcacgtctaacttcagttgtcacaccaaggccctttgggagccagccc
tcacgcatcacctctcttccccgaggctttacccccgcacagacagacgactcacacaag
cgtgtcaatggcaacgtcgatgtttctaagaagtcatcggtgccgagccggtaccatcag
ttcatgacctctgaggacgaagctctgtctagctcagcacacagcagtgaagaggaggag
gaggaggaagaggcgactacagggaagagcgtcaactctgctctgagcgtctcacctgta
cctccacaggtcaagagtgaacctcctgctccagccaaagaaaccagccaggagaactac
tgtgagatgcggatcagcctgaaccagaagcccaacagcagcagagattttggtttccag
gcagtctgggactcaacaggagcttgtgtcacatctatccagccaggcagcccggctgag
atgtgccagcttcagactggagacaaggtgctgacggtgaacgggcacaaggtggcagac
ctgagctacacagagtggaagtcccacatggatgaggctctgcaggagggcagtctggtc
atggatataaggcgtcatgggcagaacaactgggacagagttcaaccttccctgccattt
aaaagccataagaccatcaatctgaccagtacggatcatccaatgcttgtaggtccccaa
gaaaaaagcacagtcagctccagcctggatttcacttcaaacactccagcagaaacgctg
acgttcaaagagaccccggctcatcccgttagcgaagtggcttcaaacggagttaatgga
ggtttccgagaggagccggtgaccatgaggaaaaaagagtcagaacccctatctttgaaa
aacttaaagcggaggtcagagttttttgaacaaggaggaggatcagagcctgcagtgcca
gatatacccgttcccgtaatcactccctccagtcgctggtcttgggacccagaagaggag
cggaaaagacaagagaagtggcagaaggagcaagagcgcctcctacaggagaaatataag
cgtgatcaggagaagctgcaggaagagtggctcaaggctcagcaggcgatttctacaagc
atggttcccaaacagcctgggagcctgaaggtgaacaaccacagcaccggcccacactca
ccactatctcccgtcaaccagcccacatctctactgtgggaagaagaagagcgaaagagg
aaggaggagcaggagcgccaaaggcaggcggaggagaagaggaagagggaagaggaggag
cgagagctgcagcgtctccaggaggagaggatgaggaaggaaaggcaggagcaggaggaa
aggaagagaagggaggacgagaggaggttgctggaagcagaagagcagcagcgtagagag
aaggagagagcctttgagcagcagcagcagtgggccactagctcccacggctttccttat
gcccagccttcactcacctatgcagacaggacaaaatccaaatcatcccctcagctcgac
gaagaggacagacctcagagaaaaggtgtgcatgtgcaccatgggggcatggctcagcgg
ctgctggaagagcagctgaagaatgcacaagacagagtttaccaaagtcagagggctgca
tctgagctggagctggagcggaggaacatcctccatgccatgagatacagagagccggag
agagtgacctcaagtggagccgctgagaagaaggaccagcagcctgcatctcaggctgag
ctggagcggcagcagatcctcaatgagatgaaaaagaagacgtcattgctgacggacaac
agctggatccgccagcactctcccgacacttccaccaacaaggagagggccctgccacct
atgcgcagaggcgattctcttgacaacttggacacctcatacaactcctggcgttcgtca
tcgaaaccccgaagcggttcttttgcccaaaactactctcggcctcactctgccctttct
ggcaacacttccttttatggtgggggtttgagggctcagcggtatggttccacttccact
ctgccttcttcctattccatgggctcactccgaagtggggcaggatcccacttggtccct
tggtccaggcagtcgccttcaccctcttcttcttcttcacccaccacctctccagacccc
atggctgaggcagacgctcctcagcagcgcagcaggtcagtgagtggaaagaaaatctgt
acattctgtgaaagcccgctgggaaagggagcagccatgatcatcgagtcccttggactc
tgttatcatttgggttgctttaagtgcatcgactgtaagtctgaccttggaggatcagaa
gccggggctgaagtccgaatacgaaacaagcagctctactgtaactcctgctacatgcga
gtcaaaactggtcaaccaacatctatgtga
DBGET
integrated database retrieval system
