KEGG   Oreochromis aureus (blue tilapia): 116316069
Entry
116316069         CDS       T07295                                 
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau04510  Focal adhesion
oau04512  ECM-receptor interaction
oau04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116316069 (col4a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116316069 (col4a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116316069 (col4a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oau04147]
    116316069 (col4a2)
   00536 Glycosaminoglycan binding proteins [BR:oau00536]
    116316069 (col4a2)
Exosome [BR:oau04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   116316069 (col4a2)
Glycosaminoglycan binding proteins [BR:oau00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116316069 (col4a2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 116316069
NCBI-ProteinID: XP_031590416
LinkDB
Position
LG16:20437309..20502990
AA seq 1669 aa
MQEQHGRGQKNLMLLLLFLVVAILPSEVHAGGKKHNVPCGGRDCSGGCKCFPEKGARGRP
GPLGPQGPQGPPGRTGEEGIQGPKGQKGDRGRDGNIGPKGSVGMTGVPGFSGNNGIPGHP
GQAGPRGKPGADGCNGTHGDPGAPGFPGSQGSQGFPGQPGRKGEKGDNLEISVYMRRFRG
DPGTPGFDGTFGFPGDPGSRGYRGMQGPKGPPGPPGPPGPKGTMTRVIKGVRGDQGEIGP
PGPPGNDTHEQVLYNGTESQGPPGDKGVKGERGEPADNKGERGIKGMPGPRGPPGANGRP
GLKGDYGERGPRGRDGPKGVMGDPGEVISQGPFWESAAGPPGEKGLPGERGSIGDQGFPG
LQGRPASDEQQAFVFFGPEGFGGDKGDKGQQGEPGRPALSAGPQGVKGRNGEMGPPGPKG
TWGEYHKGARGEGGRPGNAGSKGPKGDHGECQCNVVNAIPGLPGRPGDPGDPGMTGEFGQ
EGDPGDPGLQGDEGFTGVPGLDGLPGPRGRKGDTIIAKEKGHHGDPGDSGNDGEPGAPGA
PGTRGQAGLPGNRGSPGEGPRGERGDKGFPGISGRPGAVGLSGEPGLNFEGVKGVRGLPG
DDGLAGYDGSPGTPGSPGGCSLTGGEGQVDVTGLCDTFVGPPGSPGLPGPTGLPGVKGFP
GQKGPLGVYGVRGTKGELGDQGIGGRPGPPGFTGPRGDLGIPGTKGSVGVPGLSGMSGRH
GTQGEKGVHGEILNAMPGPPGDPGLPGLRGIKGPLGQQGEPGYPGMGGMPGMTGFKGEVG
PQGLLGEEGKPGPDGNFGYPGDPGRTGPRGLHGAVGHPGLTGERGNEGDPGPPGPIGLKG
IPGEYGNDGVVGESGPPGDPGFPGLNGRPGVSGMKGYKGSRGMSGFEGRSGDLGLKGHSG
LKGETGLQGEEGPKGIKGLGGEKGDRGLTGPPGEKPKIPPQMLVEMKGLKGEDGPIGNQG
FIGPRGSKGFPGVPGEEGTHGFPGDPSNEKGYQGDPGPQGLPGIKGMPGIPGNRGITGFG
GMPGVKGTKGSPGAYGSSGEKGKKGDKGEKGPRIDLPGVPGLRGEEGFPGEPGQTGLTGT
TGDRGIPGFEGIKGMKGEAGILGLPGFPGSDGQKGTSGNQGQKGLPGTPGQEGQPGIPGF
RGVKGLPGPKGLDGLDGLKGQKGFTGTPGPNITGPAGETGIKGQKGDSGDPNNQPGPPGA
LGLKGFQGPQGDQGQPGPAGFRGPPGSNGTPDRKGPSGDPGFAGPKGYQGFTGNRGFPGV
DAPPGEKGVTGINGFPGFPGRKGIKGDQGPIGYIGSNGISGKKGMKGEQGFMGLPGKTGA
KGGRGPVGPKGSTGLPGLPGPPGNRGPPPVSIRIPGERGPPGPQGIQGPKGYIGDPGPKG
PPGDQGFMGPIGQKGMPGISGRPGIPGLRGEGGQSGHPGLQGMEGRHGNPGISGLPGMPG
RSVNVGYLLVKHSQSDQIPMCPVGMAKLWDGYSLLYFEGQEKAHNQDLGLAGSCLSKFST
MPFLYCNPGDICYYASRNDKSYWLSTTAPIPMMPVEEGDIKPYISRCAVCEAPSVAIAVH
SQDNIIIPQCPVGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECNGAK
GTCHYFANKQSFWLTSIDQGFHSKPSSETLKAGQLLSRISRCQVCMKNL
NT seq 5010 nt   +upstreamnt  +downstreamnt
atgcaagaacaacacgggagaggacagaaaaacctgatgctgctgcttctgttcctcgtc
gttgccatcctcccctcagaagtgcacgcaggtgggaagaagcacaatgttccctgtggt
ggaagagactgcagcggaggctgtaaatgtttcccagagaagggtgccaggggccgtcct
ggtcctcttggtccacagggcccacaggggccacctgggcgaacaggagaggagggcatc
caaggcccaaaggggcagaaaggcgaccgtggtcgcgatggaaacataggtcctaaagga
agcgtgggaatgactggcgtacctggcttctctggcaacaacggtattcctggacaccca
ggacaagctgggcccagagggaagccaggtgcagatggctgtaacgggactcatggagat
ccaggtgcaccaggatttcccggctctcagggctcccaaggttttcctggacaaccaggc
aggaaaggagagaagggagacaatctggagatcagtgtgtatatgcggcgattcaggggt
gatcccggcacaccaggatttgatggaacatttgggtttccaggagatccagggtcaaga
ggttacagaggcatgcaaggaccaaagggtcccccaggtcctccaggtccccctggacca
aagggtacgatgaccagagtgattaagggagtcagaggagaccaaggagaaattggaccc
ccggggcctccaggaaacgatacacatgagcaagttctgtacaatggaactgaatctcag
ggtcctcctggggacaaaggtgtaaaaggagaaagaggggagccggcagacaacaaagga
gagcgtggaataaaaggaatgcctggaccacggggtccacctggtgcaaatggaagacct
ggactaaagggtgattacggcgaaagaggaccaagaggcagagatggtcctaagggtgtt
atgggtgacccaggagaggtgatttcacaaggacctttttgggagtcagcggccggtcct
cctggcgagaaaggtttacctggagagaggggttcgattggagaccaaggttttcctggt
ctgcaaggacgtcctgcctctgacgaacaacaagccttcgtttttttcgggccagaaggt
tttggtggagataaaggagacaagggccaacaaggtgaaccaggacgccctgctctcagt
gcaggaccacaaggagtcaaggggcgcaacggggagatgggccctcctggaccaaaaggg
acatggggagagtaccacaagggagcccgaggtgagggaggaaggcccgggaacgcaggc
tccaaaggaccaaaaggtgatcatggagaatgtcagtgcaacgttgtaaatgctatacct
ggtttacccggccgtcctggtgatcctggcgatcctgggatgactggagagttcggtcag
gaaggtgatccaggagatccaggtctccaaggagacgaggggttcacaggagttcctggg
ctcgatggtttgccaggcccaagaggtcgtaagggggacacaattatcgccaaagagaaa
ggacatcatggtgacccaggagattcaggaaacgatggtgagccaggagcacctggggct
ccaggcacaagaggtcaggctggtttgcctggcaaccgaggttctccaggagaaggaccc
aggggagaacgtggagacaaaggtttcccaggtatttctggtcgaccgggtgcagtaggg
ctgagcggagaaccaggtctaaattttgagggtgtcaaaggtgtgcgtggcttacctggt
gacgacggtctcgctggctatgatggaagtccaggaacaccaggcagtccaggcggctgt
agtctgacaggaggagaaggacaggtggatgtaacaggcctttgtgatacatttgtagga
cctcctggatcacctggacttccagggcctactggattaccaggagttaaaggttttcct
ggccaaaaaggaccactgggtgtctatggagtaaggggaacgaaaggcgaattaggagat
caaggcattggtggccgccctggaccaccaggttttactggccctcgtggagacttggga
atcccaggcacaaaaggttccgtaggagtccccggcttatccggtatgtctggtcggcat
ggaacacagggtgaaaagggtgttcatggagaaatcttgaatgcaatgcctggaccaccc
ggagacccaggactgcctggacttcgaggtattaaagggcctttgggacaacaaggagaa
ccaggttatccaggaatgggtggcatgcctggtatgactggcttcaagggtgaggttggc
cctcaagggctgctgggggaggaaggaaagcctggaccagatggcaattttggctatcct
ggtgatcctgggaggacaggtccccgggggctacatggtgcagttggacacccaggttta
actggagagaggggaaatgaaggagacccaggtcctccaggacctattggcttaaaaggg
atcccaggggaatatggaaatgatggcgtcgtcggagagagtggtccacccggtgatcca
ggatttcctggtttaaatggacgccctggcgtttcaggaatgaagggatacaaagggtca
cgtggcatgtcaggctttgagggtcgtagtggtgatctcggattgaagggccacagtgga
ctgaaaggagagacaggactgcaaggcgaagaaggcccaaaaggaataaaaggcctaggt
ggagaaaaaggtgatcgtggtctgacaggacctcctggggagaaaccaaaaattcctcca
cagatgcttgttgaaatgaaaggactcaagggagaggatggacctataggaaatcaaggt
ttcattgggccaagaggttctaagggttttcccggtgtgccgggggaggagggaacccat
ggtttccctggggaccccagcaatgagaaaggatatcaaggagatccaggtccacagggg
ttaccaggaatcaaaggaatgccagggatacctggaaaccgaggaattactggtttcggg
ggaatgcccggtgtaaagggaactaaagggagtcctggtgcctatggctcatcgggtgaa
aaaggaaagaagggagacaaaggtgagaaaggccctcgtatagatcttcctggagttcct
ggattgagaggagaggaaggatttccaggagagccaggccagacaggactaactggaacg
actggggacagaggcatacctggctttgaaggtattaaaggcatgaagggagaggcaggc
attctgggattaccaggatttccaggatcagatgggcagaagggaacttctggtaatcaa
ggtcaaaagggccttccagggactcctgggcaagagggccaaccaggcattcctggcttc
cggggagtcaaaggtcttcctggcccaaaaggtcttgatggattagatggattgaaagga
cagaagggtttcactggaacaccagggccaaacatcactggacctgctggggagacggga
attaaaggacagaagggagacagcggtgaccctaataaccagccaggtcctccaggtgca
ctgggtttgaaaggcttccagggacctcaaggtgatcaaggacaacctggccctgcagga
ttccgtggccccccaggatcaaatgggaccccagacagaaagggacctagtggggaccct
ggctttgctggacctaaaggataccaaggtttcactggaaacagaggttttcctggtgtg
gacgctcccccaggagagaagggtgtaacaggaataaatggctttcctggattcccagga
aggaaaggaattaaaggagatcaaggtccaattggatacatagggtcaaatggtatttct
gggaagaaaggaatgaaaggagagcaaggattcatgggattacctggcaagactggtgca
aagggaggaagagggccagtcggtccaaaaggaagcactggacttccaggtcttcctggg
cctcccggaaaccggggtcctcctccagtttccatcagaattccaggagagaggggacct
cctggaccacagggtatccaaggacccaaggggtatataggggatccaggtccaaaaggt
cctcctggagatcaagggttcatgggacccattggacaaaaaggaatgccagggatcagt
ggtagaccgggaatccctggattgcgtggcgagggtggacaaagtggccaccctggtcta
cagggcatggaaggtcgccacggtaacccgggaatttccggtttacctggcatgcctggc
cgcagcgtcaatgtgggttacttgctggtgaaacacagtcagtccgatcagatacccatg
tgtcccgtgggtatggctaaactgtgggatggctacagcttgctgtacttcgagggccag
gaaaaggcccacaaccaggaccttggtttggcaggctcctgcctctcaaagttcagcacc
atgcccttcctctactgcaatccaggagacatttgttactatgccagcagaaatgacaaa
tcctactggctgtcaacaactgcccctattcctatgatgcctgtagaggaaggcgacata
aaaccatacatcagccgctgcgcagtgtgtgaagctccatcagttgcaatagcagtgcac
agtcaggacaacatcatcatcccacagtgtcctgtgggctggcgcagcttgtggattggc
tactccttcctcatgcacaccgcagcaggaaacgaaggcggaggtcagtccttgtcgtcg
cccggttcgtgcctggaggacttccgcacaacaccattcatcgagtgcaacggggccaaa
ggcacttgccactactttgctaacaagcagagcttctggctgacctccatagatcagggg
ttccactctaagccgtcatcagagacgctcaaagcaggccagctcctgtcacgcatcagc
cgttgccaggtctgcatgaagaacttgtga

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