Oreochromis aureus (blue tilapia): 116316132
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Entry
116316132 CDS
T07295
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X4
KO
K09364
POU domain transcription factor, class 2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116316132 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116316132 (pou2f1b)
03021 Transcription machinery [BR:
oau03021
]
116316132 (pou2f1b)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116316132 (pou2f1b)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
116316132 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF6681
Motif
Other DBs
NCBI-GeneID:
116316132
NCBI-ProteinID:
XP_031590495
Ensembl:
ENSOABG00000009711
LinkDB
All DBs
Position
LG16:complement(21489991..21510857)
Genome browser
AA seq
678 aa
AA seq
DB search
MADGGAASQDESSGADAKVNNQSETTKCAMESGDGNTGIQTNGLDFQRQTVPTTSAITNA
HAQALLQQLSPMQQQLFLQQAQVQLLAAAVQHSANQQNSTTGDNISASAATPITQLPLSQ
PIQIAPSLQQQNLSLPQFVLVQPGHHIATPLQPQFIISQAPQAQQGMSLLTQLPQSQPNL
LPTQPSITLATQPATPTRTTATTPIQSLPHSQTPPKRLDTPTLEEPSDLEELEQFAKTFK
QRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENL
TSDQSLSSPSALGSQGMGIEGINRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIA
DQLNMEKEVIRVWFCNRRQKEKRINPPSSGNSGGGNTPIKSIFTPSSPLVASTASLDSSP
TITTPTTLTVNPVMPLTNTSIANLSFTGTTVGATNTASVISTAPVVSTATSSPSLSTSQT
SNQSTTTESKAGTQAQTIFTQAPSSIATSLGTGQVMVAAPGLSAALQGAASLPSASFAAM
AAAAGLNPALMASSQFTQGGALLSLAPGGLGSALSPALMSNSTLATIQALASSGTIPITS
LDGSNLLFANTSAGNTPNLVTTPLFLNPQNLSLLTSNPVSLVSTGAGGLQVTADGHHQAS
TAAVPVQASTITTAPKAQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggagcagatgctaaagtgaat
aatcagtcagaaactactaaatgtgcaatggagagtggtgacgggaacaccggtattcaa
accaatgggttggattttcagaggcagacggtgcccaccacaagtgcaatcactaatgca
catgcacaagccctcctccaacagttgagcccaatgcagcagcagctgtttctccagcag
gcccaagtgcagctcctggctgctgccgtgcagcattctgccaaccagcagaacagcacc
accggggacaacatctcagcctctgcagccacaccaattacccagctgcccctgtcacag
cccatccagattgccccttctttacaacagcagaatctaagtctgccccagtttgtcctg
gttcagcctggccaccatatcgccacgccactgcagcctcagttcattatctcacaggcg
ccgcaggcccaacagggcatgagtcttctaactcaactacctcaaagccaacctaacctc
ctgccgactcaaccaagcatcacccttgcaactcagcctgcaaccccaacccgcacaaca
gcaaccacacctattcagtccctcccacacagtcagacgccacccaaacggttggatact
cccactctggaggaacctagtgaccttgaggagctggagcagtttgccaagacttttaaa
cagagacgtatcaaactgggctttacgcagggggatgttggcctggccatggggaagctg
tacggaaacgactttagccaaactactatttctcgctttgaggccttgaatctgagcttt
aaaaacatgtgcaaactcaagccattgctggagaagtggctcaatgatgcagagaacctg
acatctgaccagtccctgtcgagccccagtgccctgggttcccagggcatgggcatagag
ggaatcaaccgcagacggaagaaaagaaccagtattgagaccaacattcgagtggcctta
gaaaagagctttctggagcagaaccaaaaacctacctctgaagagatcaccatgatcgct
gaccagctcaacatggagaaggaggtgattcgggtctggttctgcaatcgacgacagaaa
gagaagaggattaatcctcccagtagtggcaacagtggaggaggcaacacccctatcaaa
tctatcttcacccccagcagccctttggtggccagcacagcaagccttgatagcagccca
actattaccacacccaccactctgactgtaaacccagtgatgcctctcaccaacaccagc
atcgccaatttgtctttcacaggcacgacagttggagccacaaacactgcatctgtcatc
tcaactgcgcctgtggtttccacggcaacaagctctccgtctttaagcacgtcccagacg
agtaatcagtccacgaccacggagagcaaagctggcacgcaggctcaaaccattttcacc
caggcgccttcatccatagctaccagtttagggacgggtcaggtgatggtggcagctccg
gggctttctgccgcgctacagggggccgcctcgctacccagtgccagttttgcagctatg
gctgctgctgcggggctcaacccagcactgatggcatcttcgcagtttactcaagggggt
gccctcctcagtctggctcctggcggcctgggcagtgcactgagccctgctctcatgagc
aacagcactctggctaccattcaagcactggcatcgagcggcacaatccccatcacctct
ctggatggcagtaacctgctgttcgccaacacttctgctggtaacacccccaacctggtg
accacgccgctcttcctgaacccccagaacctgtcgctgctcaccagcaaccccgtcagc
ctggtgtcgaccggcgcgggagggcttcaggtcactgccgacggtcatcatcaagccagc
acggctgctgtgcctgtgcaagcctcgaccattaccactgcccccaaggctcagtga
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integrated database retrieval system
