Oreochromis aureus (blue tilapia): 116316170
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Entry
116316170 CDS
T07295
Symbol
tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116316170 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116316170 (tnpo1)
03009 Ribosome biogenesis [BR:
oau03009
]
116316170 (tnpo1)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116316170 (tnpo1)
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
116316170 (tnpo1)
Pre-60S particles
116316170 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
Arm
TOR1L1_N
Vac14_Fab1_bd
Cnd1
IBN_N
HEAT_EF3_N
PDS5
Adaptin_N
CEP104-like_TOG
MMS19_C
HEAT_Maestro
UNC45-central
Dopey_N
TPR_TTI1_C
HEAT_DAAF5
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
116316170
NCBI-ProteinID:
XP_031590538
Ensembl:
ENSOABG00000018286
LinkDB
All DBs
Position
LG7:complement(51685256..51709912)
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AA seq
890 aa
AA seq
DB search
MECEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQRLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHYQNFPNGVSDFIKSECLQNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCLLLDSEDYNTCEGAFGALQKICEDSAEILDSDMLDRPLNIMIPKFL
QFFKHSSPKIRSHAIACVNQFIISRTQALMLHIDPFIENLFALATDDEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIIEYMLQRTQDHDENVALEACEFWLTLAEQPVCKEVLCGHLSQL
TPVLVNGMKYSEIDIILLKGDIEEDEAIPDNEQDIRPRFHRSRTVAQQHEGDGIEDEEDE
DDELDDDDTISDWNLRKCSAAALDVLANVFREDLLMHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDVYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQSMLHQSQPEQYEAPDKDFMIVALDLLSGLAEGLGGTIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
LISVCNNATWAIGEVSIQMGPEMQPYIAMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTCLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAVA
SWVNPKDDLRDMFYKILHGFKNQVGDDNWRRFADQFPMPLKERLTTFYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaaaccagacgagcaaggacttcaacaaattttacagctgctgaag
gagtctcagtcgcctgatacgtccacacagagatccgtccagcaaagacttgagcagctg
aatcagtatccagactttaacaactatttgatatttgttttgacaaagttaaaatcggaa
gatgaaccgacccggtccttgagtggactgatactgaagaacaatgtgaaagctcactat
cagaacttccctaatggcgtgtctgatttcatcaagagtgagtgcctccaaaacatcgga
gattcatctcctcttattcgggccactgttggtatcctcatcactacaattgcctccaag
ggagagctacaaaattggcctgagctgttacccaaactctgcctgctgctggattctgag
gattacaacacatgtgaaggagctttcggagctcttcagaagatctgcgaggactctgct
gagatcctggacagtgacatgctggaccgtcctctgaacatcatgatccccaagttcttg
cagtttttcaaacacagcagtcctaagattaggtctcatgccatcgcctgcgtcaatcag
ttcatcatcagcaggactcaggctcttatgcttcacatcgatcctttcattgagaatctc
tttgcactggcaacagatgatgagccagaagtgaggaagaatgtttgcagagctcttgtt
atgttgcttgaggttcgcctcgatcgtctcctgccacacatgcataacatcatagagtac
atgctgcagaggactcaggaccatgatgagaatgttgccttggaggcctgtgagttctgg
ctgacactggccgagcagccggtgtgtaaggaagtgctgtgtggccacctctcccagctc
actccggtgcttgtcaacgggatgaagtactctgagattgacatcattctgctcaaggga
gacattgaagaggatgaggccattccagacaacgagcaagacatcagaccacgcttccat
cgctcccgcactgttgcccaacagcatgagggtgatggaattgaggacgaggaggatgaa
gatgacgaactagatgatgatgatactatctctgactggaacctgcgcaagtgttcagca
gcagcgctcgacgtgttggccaacgtgttcagggaagatctgttgatgcacattctgcct
ctcctcaaagagctgcttttccatccagagtgggtagttaaagagtctggaatcctagtg
ctgggggctatagctgaaggctgcatgcaaggaatgatcccatacctgcctgagctcatc
cctcatctcatccagtgtttgtctgacaagaaagccctggtgcggtctatcacctgttgg
acactgagccgctatgcacactgggttgtcagccagcctccggatgtttacctgaagcct
ttaatgacagagctgctcaaacgcattctggatagcaacaagcgtgtgcaggaggctgct
tgcagtgcctttgccactttggaggaggaggcttgtacagagctggtgccctacctggca
ttcatcctggacacactggtgtttgctttcagcaagtaccaacataaaaatctgctaatt
ctttatgacgcgataggaacacttgcagattcagtgggccaccatctcaataaaccggaa
tacatccagatgttgatgccacctttgatccagaaatggaaccagctaaaagatgaagac
aaggatctcttccctttgttagaatgtctgtcatctgtagccacagcgctgcagagtggc
ttcttgccctactgtgagcccgtgtaccaacgctgtgtcaacctcgtccagaagaccctc
gctcagtccatgcttcatcagtcccaaccagaacagtatgaggcccctgacaaagacttc
atgattgtggctttggatcttcttagtggactggcggaaggattgggaggcaccattgag
cagctggtggctcgtagcaatatcctcaccctcatgtaccagtgcatgcaggacaaaatg
ccagaagttcgtcagagttcatttgctctgctaggggatctcaccaaggcttgtttccag
catgtgaaaccatgcatcgctgatttcatgcccatactgggtacaaacttaaacccagag
ttaatatcagtgtgcaacaatgcaacatgggctattggagaggtatctatacaaatgggg
cctgaaatgcagccatacattgcgatggtgctgcaccaactggtggagatcattaacagg
cccaataccccaaagacactactggagaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcacccatgctacagcagtttataagaccctggtgcacctgt
ctgcgaaatataagggacaacgaggagaaggactctgcattcagaggaatttgcactatg
atcagtgtaaatccaggaggtgtagtgcaggattttatattcttctgtgatgcagtggct
tcctgggtcaatccaaaggatgacctcagagacatgttctacaagatccttcatgggttt
aagaaccaggtgggagacgacaactggagacgcttcgcagatcagtttccaatgccactg
aaggaacggttgacaaccttttacggggtgtaa
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