Oreochromis aureus (blue tilapia): 116316329
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Entry
116316329 CDS
T07295
Symbol
copb2
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116316329 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oau04147
]
116316329 (copb2)
Membrane trafficking [BR:
oau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
116316329 (copb2)
Exosome [BR:
oau04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116316329 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_COPA_B
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
116316329
NCBI-ProteinID:
XP_039457912
Ensembl:
ENSOABG00000022283
LinkDB
All DBs
Position
LG18:12126728..12134594
Genome browser
AA seq
937 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLADKVTASQENNEGVTEDGIEDAFEVEIQEIVKTGLKRVGDCVSIXNHHQ
LICKLRRLNSQFHVGDXEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVL
EYQTAVMRRDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLG
ELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNAVMV
GKLAEGAERDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKL
WRENLAKVNQKAAESLADPTEYENLFPGLKEAFAAEHYLRETCLGTTRPAKDYPLVTPNE
DRNILEEAQGYEPKGTFLPPVSKTQDEEEAAAPVAAVTPLQPEPAPPAAVEKEKETEIYD
FSQKDKTLDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacattaagcggaggctgacagccaggtcagaccgggtgaagagt
gtggaccttcacccaactgagccatggatgctggctagtctgtacaacggcagcgtctgt
gtttggaaccatgaaactcagactcttgtcaagactttcgaagtttgcgacctgcctgtc
agagcttctaaatttgtggcaaggaagaactgggtcatcacaggagcggatgacatgcag
atccgtgtgttcaactataacaccttggagcgggtccacatgtttgaggcacactctgac
tacattcgttgcattgctgtccatccaacccagccatacatcctcaccagcagcgatgac
atgttgatcaagctttgggactgggagaagaagtggtcatgcagccaggtctttgagggt
cacactcattatgttatgcagattgtcatcaaccccaaggacaacaatcagtttgccagt
gcttccttagacagaacaattaaggtgtggcagcttggctcttcatctcccaatttcact
ttggaaggtcatgagaaaggagtaaattgtattgattactacagtggaggagacaagccc
tacctgatatctggggctgatgatcgccaagtcaagatctgggactaccagaacaagacc
tgtgttcaaactctggagggccacgcccaaaatgtctcttgcgtcagtttccacccagag
ctgcccatcatcattactggatcagaggatgggaccgtgcgtatctggcactcgagcact
taccgccttgagagcacactgaactatggcatggagcgagtgtggtgtgtgtccggtctc
aggggctccaacaatgtggcgctaggctacgatgaaggcagcatcattatcaaggtgggt
cgggaagagccggccatgtctatggacactaatggcaaaatcatctgggccaaacacagt
gaaatacagcaggccaacctgaaggccatgggtgatactgaaatcaaggatggagagagg
ctaccattggctgtcaaagacatgggcagctgtgagatttaccctcaaaccatccagcac
aaccctaatggaaggtttgttgtggtgtgtggagatggagagtacatcatctacaccgct
atggctttgagaaacaagagcttcggctcagcacaggagtttgtgtgggcacacgattct
tctgaatatgccatcagagaaagcaacagtgtcgtcaaaatcttcaaaaacttcaaagaa
aagaaatcatttaagcccgactttggagctgaaggtatctatggaggtttcttgcttggg
gtgaggtcggtgaacggcctggcattttacgactgggagaacacagagttaatccgccgc
attgagatccagcccaagcatatcttctggtcagactctggtgaactggtctgcattgcc
acagaggagtccttcttcattctgcgctacctggcagataaagtcactgcctcccaagag
aacaacgagggagtgacagaggatggtattgaagatgcctttgaggtagagatccaggag
attgtcaagactgggctcaaaagggttggagactgcgtttcaatctaaaaccatcaccag
ctaatctgtaaacttaggagactcaactctcagtttcacgttggggactgagagattgtc
acaattgcacacttggacaggaccatgtacctactgggttacatacctaaagatgaccgt
ctgtatctgggagacaaggagctcaatatcgtcagctactccctgctggtctccgtcctg
gagtaccagactgctgtaatgaggcgggactttggaatggctgacaaggtgctacccact
atccctaaagagcagaggaccagggtggcacacttcctggagaaacagggtttcaagcag
caggccctggcagtgtccacagaccctgagcacaggtttgagttagccttgcagctggga
gagttgaagattgcttaccagctggctgtagaagcagagtcagagcagaagtggaagcag
ttagcagagctggctattagtaagtgccagtttggcctggcccaagagtgcctgcaccat
gcccaggattatggtggcctgctcctcctcgctacagcctccggtaatgctgtcatggtg
ggcaagctggctgaaggggcagaaagggacggcaaaaacaatgtagccttcatgacctac
ttccttcagggaaaactggatcagtgtttggagcttctgatcagaacaaacagactacct
gaagctgccttcctggctcgcacttacctacccagccaggtgtcccgtgtggtcaaatta
tggagggagaatctggccaaggtcaaccagaaggcggctgaatccctagcagaccctaca
gagtatgagaatctgttccccgggctgaaagaagcctttgcagctgaacactacctgaga
gaaacctgcttgggcaccaccaggcctgctaaagactatccacttgttacacccaatgaa
gacagaaacattcttgaagaggcccaaggatacgagcccaaaggaaccttcctacctcct
gtctctaagacacaagatgaagaggaggcagcagctcccgttgctgcggtgacaccttta
cagcctgagcctgctcctcctgcagcagtggagaaagagaaagagactgaaatctatgat
ttctcacagaaagataagactctggatgagctcgaggtggacctggacaacatggagctg
gatgacattgacaccacagatgttaaccttgatgatgactttctcgacgattga
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integrated database retrieval system
