Oreochromis aureus (blue tilapia): 116316355
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Entry
116316355 CDS
T07295
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116316355 (snapc4)
03021 Transcription machinery [BR:
oau03021
]
116316355 (snapc4)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
116316355 (snapc4)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
116316355 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
InvE_AD
Motif
Other DBs
NCBI-GeneID:
116316355
NCBI-ProteinID:
XP_031590769
Ensembl:
ENSOABG00000008596
LinkDB
All DBs
Position
LG12:complement(34517284..34532438)
Genome browser
AA seq
1677 aa
AA seq
DB search
MSASLSAKRDKIQREVEELERSLSVTNAELELLSSGTDDDSDRENVDNPAGQSAAGLLAE
REKIQKEIQNLEEVLGPHSPIIVSDDDCSSSEESDLGLSPSVDSCLQMNLVYQQVVQETL
DQLEKLLTQNQKEQKELETQLSGRIKEPSKQQPTNSSYQQPMKMYLGRFLKPYFKDKLTG
LGPPANQEAKEKTSRIAGYLDDKKLKIKRWESWQKTLLIHAVSRESLRRLIQPKLSKVDY
LSQKLLSVEEADRQLIREQIDTLEREINLLRQKKEEELIGDRFEEYDWQKISNIDFEETR
DAGDIRCFWQNFLHPSINKTRWSQEEVQQLKEISRKHKERHWEIIAQELGTGRTAFMCLQ
MFQRFVSGSLKRGSWTPAEDDLLRELVDKMRIGNFIPYTQMSYFMEGRDPAQLIYRWNQV
LDPSLKRGPWTKQEDKLLLQAVARHGEKNWWKIRLEVPGRTDGGCRDRYYDCLKAGTKRG
PFDRKERELLLELVEKHGVGHWAKIASEIPNRIDAQCMRTWRQMSKAADEKLGCARKPQR
KRGGDEEKKKKAAKTNNNIRRRLKAIKEEVISEEEEEEEMAIEYMDSDDEKKKKMKKTEV
PEVEKLVEVQEEQKEEELEEEYTFPPMQEWIPVERAQPFTFLNFRPVVLASSNESHNDNL
MRSTILGKSGRSVIIGPHPREVRWEERHDSGAMMMVSPDQLRAHLHNQARRFYSRSKCKT
KTSQTSRPLFMKGMTGQGVDLMLQAAVTPWIGNLLIPASTKRTAADVLRERVEKKELSST
SVFTLFLRVMNVDVMGCKEMIERRQSGVTLMTPPSNPPPGKFKNPNTVAGILQRMHLGMQ
ERSEADRWCRQTPPSQLHPSIVTQVPPNMRPQVAPLSCHQPVSIPHSDSQLNAAFSPAQH
TSRHAGVTISPFALPAACQRQTTTPVFVVSTLQNVSSTCNQQAVPLTSLPPFLNQPVSIS
PSQTAVLSPPACSRQLCLSPSTLNLPRGKKQTENHESQNGVVHASVKGEVSMSEDRKKTS
NLSQKARAPRQVTKAQAKVKKTAKTAPLKMASAPIQLLPQNVHSSQTTPPTAHPVDVIPS
SLVASLHLTPNDSSTSGNLSFLSCQSATPSHSDGAMSSTPNFSLVPLPSSVTSQHAVSST
SCPNSNDHDYTFLTPSPTEHGSDLSQPCPVPKQPDSNVPNGQARGKKRPRQAAEKQEVMR
NKDDQCVGRTSTGVDGKRIRKLTHKAKALQEDAQAKAEAKKKKSSTSSPRQKRSRSAGDA
HRAESKEKTSTQTPVAAPVPRLHLCPGQSMWVMTPTGLVQLAQAPPQGLEMAVINTVPPS
PGSSLNQYTAPSPVQLATRGLRPIAPKLSSVPVPITLPNQPHPLPEPPICNPKPLALPSV
QPSDLDHGHYSLPFCPPLSSTNFSPRGTVRVDAPQSRPLRKEVLEIDPSLMFLEPPAAIN
DWLSGSGGVVIPGMSLSLPYLPPFVSNLSTLSGLLCAKKSLTRSSLQLVREGNKSRWPQT
NSKPDSSTKTGYNEPPPQPPPDLPDSTSDITPAEKQPASSAAAPVSSDHLQQQEKNEEEE
EEELVAAVRQLVAERFSNNPAYQLLKARFLSCFTLPALLATMPPVPKAETYQTNQEEERE
EEVEEEGEEEVELRKIKEMAKLRRAEKSLQLLCDSSGASASHFSGITDVIRPTSDQT
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctctctgtcagcaaagagggacaagatccagagagaggtagaggaactggaa
cggagtttgtctgtaaccaatgctgaactggagctcctaagcagcgggacagatgatgat
tctgatcgtgagaatgtggataacccagctggacagtctgcagcaggtctgttggctgag
agagagaaaatccagaaagagatccagaacctggaggaagtgctgggaccacacagtccc
atcattgtttcagatgatgattgcagcagcagtgaggagagtgaccttggcctgtcaccg
tcagtggactcatgtcttcagatgaaccttgtgtaccagcaggtggtccaagagactctg
gaccagctggagaaactactaacacaaaaccagaaggagcagaaggagctggaaactcag
ctgtctggacgaattaaagagccttccaaacagcagcccaccaactcctcctaccagcag
ccaatgaagatgtatctaggtcgcttcctaaaaccatacttcaaggacaaactgacggga
ctgggtcctccagccaatcaggaggcgaaggaaaagacgagcaggattgcagggtatctc
gacgacaagaagctgaaaataaaacgatgggagagctggcagaagactctcttgatccat
gcagtgtctagagagagtctgagaagactcatccagcccaaactctccaaggtagactac
ctgagtcagaagttgctctctgtagaggaggcagacaggcagctaatcagagagcagata
gacactttggagagagaaatcaacttgctcagacagaagaaggaagaggagctgattggt
gatcgatttgaagaatatgactggcagaaaatatccaacattgattttgaagagacgagg
gatgcaggggacatccgctgtttctggcagaacttcctccacccatccattaataagact
cggtggagccaggaggaggtgcagcagctgaaggagatcagtaggaaacacaaagagaga
cactgggagatcatcgcacaagagctggggactggaagaacagctttcatgtgtcttcag
atgttccagcgttttgtctcgggctcactaaaacgtggcagctggactccggctgaagat
gatctgctgagagagctggtggacaagatgaggatcgggaacttcatcccatacacacag
atgagttacttcatggaaggtcgtgaccctgcacagttgatctacaggtggaaccaagtt
ttagatccgagcctgaagagagggccatggaccaagcaggaggataagcttctgctacaa
gctgtggctcgtcacggagagaagaactggtggaagatcaggttggaagttcccggacgc
actgatggaggctgcagagacaggtattatgactgtctgaaggcagggacaaaaagaggc
ccattcgacaggaaggagagggagctgctactggagctggtggagaaacatggagtcggt
cactgggcaaagatcgcatctgagattcccaaccgtattgatgctcagtgtatgaggaca
tggaggcaaatgagcaaagctgcagatgagaaattagggtgtgctagaaaaccacaaagg
aaacgtgggggagatgaggagaagaagaagaaggctgctaaaaccaacaacaacatcagg
agacgcctcaaggcaataaaagaagaagtgatcagtgaggaggaggaggaggaagagatg
gcgatagaatacatggacagtgatgatgagaagaaaaagaagatgaaaaagacagaggta
ccagaagtggagaaactagtggaagtgcaagaggagcagaaggaggaggagttggaggaa
gaatacactttcccacccatgcaggaatggattccagttgaaagagcccaaccatttact
ttcttgaactttcgtcctgtggtgttggcttcctccaatgagtctcacaatgacaattta
atgcggtcgaccattttggggaagtctggacgctctgtaatcatcggaccacatcccagg
gaggtgcgatgggaagaacgccacgacagcggcgccatgatgatggtgtcacctgaccag
ctccgagcccacttgcacaatcaagcgcggaggttttacagtaggtctaaatgtaagaca
aagacttcccaaaccagcaggccactctttatgaaaggaatgactggccagggggtagat
ctcatgcttcaggctgcagtgacaccatggatcggcaacctgctgatcccagccagcacc
aaaagaacagcagcagatgtcctgagggagcgagtagagaagaaagagctttcttcaaca
tctgtcttcacgctgttcctcagagtcatgaatgtggatgtcatggggtgcaaggagatg
atagagcggaggcagagcggggtgacgttaatgactccaccttccaatcctcctcctggc
aaatttaagaatccaaatactgtggcaggaatacttcagcggatgcatttgggcatgcag
gagcgatctgaggcagacaggtggtgcagacaaactcctccttctcagctccacccatca
attgttactcaggtgcctcctaacatgcggcctcaagttgctcctttgtcatgtcatcag
cctgtctcaattcctcattctgactcacagctgaatgctgctttctctccagctcaacac
acatctcggcatgcaggggtcaccatttctccatttgctcttcctgctgcttgtcagagg
cagactaccactccagtttttgtggtctcaacgctccagaatgtctcctctacctgtaac
caacaggctgtacctttgacctcattgcccccattccttaatcagcctgtatctattagc
ccctcacaaactgctgtcctctcccctcctgcctgttcccgccaactttgcctttccccc
tccaccctaaatctacccagaggaaaaaagcaaacagagaatcacgagagtcagaatggg
gttgtacatgcaagtgtgaagggagaagttagtatgagtgaggacagaaagaagacttcg
aatctcagtcagaaggccagagctccacgccaagtcaccaaagcacaggctaaagtaaaa
aagacagcaaagacggctccattaaagatggccagtgctcccattcagctgctacctcag
aatgttcactcctcccaaaccacacctcctacagctcatccagttgatgttatcccttct
tcattagtcgcatctcttcatctcacaccgaatgactcttcgacttctggtaacctgtcc
ttcctgtcatgccagtctgccacgccttcccactcagacggagccatgtcttcaactcca
aactttagtttagtcccactcccctccagtgtgaccagccagcatgctgtttcctccact
tcgtgcccaaactcgaacgaccacgactacacatttttaacacctagccccactgagcat
gggtctgacttgagtcagccttgtcctgtcccaaagcagccagacagcaatgttcccaat
ggccaggccagaggaaagaaaagaccaaggcaagcagcagaaaagcaggaagtaatgaga
aacaaggacgaccagtgtgtgggcaggacaagtacaggtgtggacggaaagcgaattcga
aagctgactcataaagccaaagctctgcaggaagatgctcaggccaaggctgaagccaag
aagaaaaaatcttctacctcgtctcctcggcagaagcgctctcgcagtgctggcgatgct
caccgtgcagaatctaaagagaagacgagcacacagactccagtcgctgctccggtgccc
agattgcatttatgtccgggtcagtcaatgtgggtcatgactcctacaggcctggtccag
cttgcacaagccccgccccaaggcctggagatggcggtaataaacactgtccctccttcc
ccagggagtagtttaaaccaatacacagccccatcacctgtccagcttgccaccagaggc
ctgcggccaattgcacctaaactgtcctctgtgcctgtaccgataacccttccaaatcag
cctcacccacttcctgagccacccatttgtaacccaaagcctctcgccctaccctcagtg
cagccatctgacctagaccatggtcactactccctccctttctgtcccccactgtcttcc
actaacttctcaccgcggggcacagtcagagtggatgccccacagtccaggccactgagg
aaggaggtgctggagatcgacccctctcttatgttcttggaacccccagcagccataaat
gactggctaagtgggtcaggaggggtggtaataccaggaatgagcttgtccctgccctac
cttccgccctttgtcagcaatctgagcacgctcagtggactgctttgtgccaagaagtcc
ctaaccaggtcgtccctgcagctggtgcgtgagggcaacaaatccagatggccccagacc
aattccaagcctgacagcagcacaaagaccggctacaatgagcctccacctcaacctcca
ccagacctgccggactccacctcagacatcacacccgctgagaaacaaccagcgtcctct
gcagccgcccctgtcagctctgaccacctgcagcagcaggagaagaatgaggaggaagag
gaggaggagctggtggcagcagtgcgtcagctggtagctgagcgtttctcaaataatcct
gcctaccagttgctgaaggcacgttttctgtcttgtttcactctacccgcactcctggct
accatgccaccagtcccaaaggctgaaacctaccagaccaatcaggaagaggagcgggaa
gaggaggtggaggaggaaggagaagaagaagtggagctaaggaaaatcaaagaaatggcg
aaactgaggagagctgagaaatcactgcagttgctgtgtgacagctctggagcttcagcc
agtcatttttcagggatcacagatgtcatcagacccacgtcggaccagacctga
DBGET
integrated database retrieval system
