Oreochromis aureus (blue tilapia): 116316403
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Entry
116316403 CDS
T07295
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116316403
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
116316403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_8
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
116316403
NCBI-ProteinID:
XP_031590820
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All DBs
Position
LG12:343335..354682
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AA seq
711 aa
AA seq
DB search
MTPPSSREKKRRRAEGEECPAPINIDTPERGEKEEEELFSPPAEEGRVSRKEKKKKRREE
DEVFSSPAEDGQVNGEEEEENSKGGKKKKKKKKKNKNKRRAEEEEVFSSAFSSAEDAHVN
GEEEEKEQRGNKQEETSEAEKKTEEELGPSSLGLGEQLSRKEKKKKKKRREEKEEELLAP
SSPPTGDEKVSREKKRKKKQEDKEPERREEEKEVFCSPAEDGQVGRKEEKSSEGGKKKKK
AEVTSQEREPYSETKQKKKRARMASVTTATANTHVSVQTVKNRLKEERKSESVQEVTSCN
GEKGTKNVNPAKRQRGAAGGRGEEAEEKKKRRTEVAANPEEFDHKLLEELQEFVPDVKKK
SADQINKLLRYDLARFKAFKKKGVSLRWGRYSQHENQQIEQNVADFLALTGISSAEQLLF
PHRFKEQELEIRRLKAQHHFLENIAEGIPRTCDQVYVRAKKIFDERNNMGRFSEDELCSL
TKLQKLHGNDWKRISEKMDRSIYSLEKRFNTIAQGRGTWTAEEESRLWQAVRAHLETLVQ
QSPAGLSRNQLCNNLPWKRISEQVETRSWIQCRLKWFSLLKSKLSSKGRVFSRGAEGYAA
KIQLINTLYNMRVDDAADIDWDEVAGIIGTVTPMCVQKMFYRLKVSRVPNWPSLSYAEII
DFLQRRVIPVLEERLKKCEPKEAQEEEEKERLYQLSDIFSELSDDVELDNS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacacctccatcatcccgtgagaagaagaggaggcgcgcagagggcgaggagtgtcct
gctcccatcaacatcgacactcctgagagaggagagaaggaggaggaggaactgttcagt
cctcctgctgaagagggacgggtgagcaggaaggagaagaaaaagaagagacgagaggag
gatgaggtgttcagctcgcctgctgaagatggacaggtaaacggggaggaggaggaggaa
aatagcaagggggggaagaagaagaagaagaagaagaagaaaaataaaaataagagaaga
gcggaggaagaggaggtgttcagttctgctttttcttctgctgaagatgcacatgtgaac
ggggaggaggaggagaaagagcagagggggaacaaacaggaggaaaccagcgaggcagag
aagaagacagaggaggaactgggtccctcttctcttggtctgggtgaacagctgagcagg
aaggagaagaagaaaaagaagaagaggagagaagagaaggaggaagaactgttggctcct
tcctcgcctccaactggggatgaaaaggtgagcagggagaagaaaaggaagaaaaaacag
gaggacaaagagccagagaggagagaggaggaaaaggaggtgttctgttctcctgctgaa
gatggacaggtgggcagaaaagaggagaagagcagcgagggaggaaagaagaaaaagaaa
gcggaagtgacatcacaggaaagggagccttacagcgagactaaacaaaagaagaagagg
gcacgcatggcgagtgtaaccacagcaacagccaatacacatgtgtcggttcaaacagtc
aagaacaggttgaaggaggagaggaaaagtgagagtgtgcaggaagtgacatcatgtaat
ggagagaagggaacgaagaatgtaaatcctgcgaagaggcagagaggcgcagcggggggt
cgcggggaggaggcggaggagaagaagaagaggagaacggaggtggcagccaatcctgaa
gagtttgaccacaagttgttggaggaacttcaggaatttgttcctgatgtgaagaagaaa
tctgctgatcagatcaacaagctgctgcggtatgacttggcacgcttcaaggccttcaaa
aagaaaggtgtgtctctgcggtgggggcggtactctcagcatgagaaccagcaaatcgaa
cagaacgtggccgacttcttggctctgacgggcatcagctcagcggagcagcttctgttt
cctcacaggttcaaagagcaggagctggagatcaggaggctgaaagcacagcatcacttc
ctggagaacatcgctgaggggattcctcggacatgtgatcaagtttacgtcagagccaag
aagatttttgatgaaaggaataacatgggaaggttttctgaggatgagctatgctctctc
acaaagttgcagaagctccacggcaacgactggaagagaatctcagagaagatggaccgc
agcatctactcgctggagaaacgctttaacaccatcgctcagggtcgcggtacctggact
gcagaggaagagtcccgcctttggcaggctgtcagggctcacctggagacgctggtccag
cagagccctgcaggtctgagcagaaaccagctgtgcaacaacctgccctggaagaggatc
agcgagcaggtggagacccggtcctggatccagtgtcgtctcaagtggttctccttgctg
aagtctaagctgtcctcaaagggaagagtgttcagccgaggcgccgaggggtacgccgca
aaaatccagctcatcaacacgctctataacatgcgtgtggacgacgcagcggacatcgac
tgggacgaggtggctggaatcatcgggactgtgacaccgatgtgtgttcagaagatgttt
tacaggttgaaggtttccagagttccaaactggccgagtttgtcgtacgcagagatcatc
gacttcctgcagaggagagtcatccctgtcctggaggagagactgaagaagtgtgagccc
aaggaggcgcaggaggaggaggagaaggagagactttatcagctctctgacatcttctca
gagctcagtgacgacgtggagctggacaacagctga
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