Oreochromis aureus (blue tilapia): 116317011
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Entry
116317011 CDS
T07295
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04140
Autophagy - animal
oau04148
Efferocytosis
oau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116317011 (vps16)
04148 Efferocytosis
116317011 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116317011 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116317011 (vps16)
Membrane trafficking [BR:
oau04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116317011 (vps16)
Hops complex
116317011 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
116317011
NCBI-ProteinID:
XP_031591523
Ensembl:
ENSOABG00000023761
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Position
LG15:complement(40910837..40921816)
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AA seq
834 aa
AA seq
DB search
MAFITASWNPLGDAFYRKTELYEMSWSLRDGLRDSLVAAAPYGGPIALLREPQRRSPSSR
PQLEIYSASGGAFASFPWKSGPVVQLGWTVSDELLCIQEDGTVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGIAIVTSSSRFTLATNIDDLKLRRLPEVPGLQGKPSCWVVL
TQDRQTKVLLSNGPELFILDNTSCTVVCPSGLSPQDGSIVHMSVSFSYKYLALLTDTGHL
WTGLSTLQEKLSEVDTKKTTVPKQMLWCRRPKSQQPSVVLMWDRLLLVVGVCNETIQYPI
EDPCVLVGEMDGVRIISSSNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDTNTQKSLMRAASFGKCFLTDFSPDQFVTTCR
ELRVLNAVRDSSVGLPLTHTQFKQLTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLTDDAIARAVCVKVGDSPGVSYSDIAAKAYECGRAELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVSYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLEGRLSLLQSAVDEYNKAKNE
FAVKATEDEMRLLRFQRKLDDEKGAGLLGLSLQVTMETLLSLGLHKQAEQLYKDFRVPDK
RYWWLKLKSLAEKEEWDELEKFSKSKKSPIGYLAFVEVCIKCNNKYEAKKYVSKVTPEQK
VKAHLAVGDLEGAADAAIERRNEAEMGAVLSRCSPSNSLVIERLNRARAAIAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacagccagctggaacccgctgggagacgccttttaccgtaagacggag
ctgtatgagatgagctggagtctgcgtgatggactcagagacagtctggtggctgcagct
ccatacggaggccccatcgccctgctcagagaacctcagcggcgttctccgagttctcgc
cctcagctggagatctactctgcgtcaggaggcgccttcgccagcttcccctggaaaagc
ggtccagtggtccagctcgggtggacggtctctgatgaactgttgtgtatccaggaggac
ggcacggttttgatctacgacctgtttggatcttttaagagacacttcagtatgggacag
gaagtggtccagagtcaagtgttggaggccaaggtgttccactccccttatggaacaggt
attgccatagtaacaagctcctcccgtttcaccttggccaccaacatcgatgacctgaag
ctccggaggttacctgaagtcccaggtctgcagggaaagccgtcctgctgggtcgtcctc
actcaggacagacagactaaagtcctgctgtccaacggaccagaactcttcatcctggac
aacacgtcctgcactgtggtgtgtccttcaggcctcagtcctcaggacggcagtatcgtc
cacatgtctgtgtctttcagctataaatacctggctctcctcactgacactggacacctg
tggacaggcttgtccaccctacaggagaaactgagtgaagtcgacaccaagaagaccacg
gtgcctaagcagatgttgtggtgtcgcagaccaaagagccaacagccatctgtggtgttg
atgtgggacagactgctcctggtggtcggggtgtgtaatgagactatccagtatcccatt
gaggatccatgtgttttggtgggagagatggatggagttcggataatcagctcgtccaat
caggagctgctgcaggaggttcctctggtctgccaggacatcttcaagatcgcctccatg
gcgcctggagctctgctgctggaggcccaccgggagtacgagaaatcgagtcagaaggcg
gacgagtacctgcgagagatcaaggagcagagcatgctgggagaagcagtcagacagtgc
gtggaggcggcaggtcacgagtacgacaccaacacccagaaatccttgatgagggcggcg
tcctttgggaagtgcttcctcacagacttcagtccggatcagttcgtgacaacctgcagg
gagctgcgagtgctaaacgccgtcagagacagcagcgtggggctgccactgacgcacact
caattcaaacagctgactctacaggtgctgattgacaggttggtgtatcgacagttttac
ccgttagccattgaaatctgtcgttacctgaagattcctgattatcagggagtcagccga
gtcctcaaacactgggcgtcatgcaaggtgcagcagaaggacctaacagacgatgccata
gcacgagcagtgtgtgtgaaagtgggagactcacctggggtttcgtactcggacattgca
gctaaagcttatgaatgtggacgagcagagctcgccatcaagctcctggacttcgaggct
cggtctggagagcaggttcctctgctgctgaagatgaagaggagtcagctggctctcagt
aaagctgtagagagcggagataccgacttggtgtacacggtggtgtcgtacctgaagaac
gagatgaacagaggagatttcttcatgactctgaggaaccagccggtcgctctcagcctc
tacagacagttctgtaagctgcaggagcaggaaactctgaaggacctgtataaccaggac
gacgaccaccaggaactggccaactattatgtcactgcaagctacagggaaaagaggttg
gagggccggctgtctctcctgcagagcgctgtcgatgagtacaacaaggccaagaacgag
tttgcagtaaaggccacagaggacgagatgcgtctgctccgttttcagcgcaaattggac
gatgagaaaggggcggggcttcttggactgtccctacaggtgaccatggagacgctgttg
tcattaggactccacaaacaggcagagcagctttacaaagacttcagagtacctgacaaa
aggtattggtggttgaagttgaagtctctggcggagaaggaggagtgggatgagttagag
aagttctcaaagagtaagaagtctcccattggctacctggcgtttgttgaagtttgcatc
aagtgtaacaacaagtacgaggccaagaagtacgtttccaaggtgacgcctgagcagaag
gtgaaggcccacctggccgtcggtgacctggagggggctgcggatgccgccatcgagcgc
aggaatgaagctgagatgggggcagtcctctccagatgctccccctccaacagcctggtg
attgagcggctgaaccgagctcgggccgccattgccaaaaagtga
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