Oreochromis aureus (blue tilapia): 116317452
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Entry
116317452 CDS
T07295
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116317452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oau03400
]
116317452
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
116317452
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF5817_CT
EURL
UPF0242
Motif
Other DBs
NCBI-GeneID:
116317452
NCBI-ProteinID:
XP_031592085
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Position
LG12:21851808..21878740
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AA seq
354 aa
AA seq
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MGIKATSHFRLPGTYVTKAKHGLRDETTHCAVVDWLKAQELKVETTVEAVKSFGHVRNMS
GTVHQIRLSDDPDTPYFLRVDWAIDLGAGFTLALTNGSSAWIGEVSEDDMTREANDIGVP
RERYVEDLLQALTKSGGGKSEDKEMYTFGLSADRRCLLYEKTCNDISVHLGSVELQPSPD
PLELTRDMIAQSLKRSTDLETENSRLLEQNCKLKQDHQRILGQLEQQVQKKEALEKELYS
RFVMVLNKKKAKIRGLQEAVNKLRNSDDHPSDEEGVQSDNLTTQGESSPDRGEETSQSIQ
PSLEPTILITGRNLVWEGIPVDRTFSDDDDDEDEQPKRKRRLLHTSSPGSSEQL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcaaagccacatcacacttccgcctccctggaacttacgtaacgaaagcgaag
cacggtttgcgtgacgaaacgacgcactgcgctgtcgttgattggctgaaggcacaagag
ttgaaggttgaaactactgttgaagctgttaagagtttcggacatgtgagaaacatgagc
ggtacagttcatcagataagactaagtgatgatcctgatactccgtacttccttcgagtg
gactgggccatagacctgggtgctggtttcacattagctcttactaatggcagctcagca
tggattggagaagtttcagaggatgatatgacaagggaagccaatgacataggagtccca
agagagagatatgttgaggatcttcttcaagcactaacaaaaagtggaggaggaaaaagc
gaagacaaggagatgtatacttttggcctctctgctgatcgccgttgtctcttgtatgag
aagacttgtaatgacatttcggtgcacttgggctctgtggagctccagccatctccagac
cctctagagctgacccgtgacatgattgcacagtccctaaagcgcagcacagatctggag
acagaaaactcacgattgttggagcaaaactgtaaattgaagcaggatcaccagcgaata
ctcggacagctcgagcagcaggttcagaaaaaggaagcgttagagaaggaactgtactca
cgttttgtcatggtgctgaataagaagaaggccaagatcagaggtctgcaggaggctgtc
aataagcttcgaaactcggacgaccatccgagcgacgaggagggtgtacaaagtgacaat
ctcacaactcaaggtgaaagcagtccggacagaggagaggagaccagtcagagcatccag
ccctctctggagccaactatcctcattacaggccgtaatctggtctgggaagggatcccc
gttgaccggactttttctgatgatgatgatgatgaggatgagcaaccaaaacggaagcgt
aggttgcttcacacctcgagcccaggatcctctgaacaactttaa
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