Oreochromis aureus (blue tilapia): 116317561
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Entry
116317561 CDS
T07295
Symbol
pkd1l2a
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oau04040
]
116317561 (pkd1l2a)
04091 Lectins [BR:
oau04091
]
116317561 (pkd1l2a)
Ion channels [BR:
oau04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116317561 (pkd1l2a)
Lectins [BR:
oau04091
]
C-Type lectins
Others
116317561 (pkd1l2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
SUEL_Lectin
Lectin_C
REJ
GPS
OTU
Motif
Other DBs
NCBI-GeneID:
116317561
NCBI-ProteinID:
XP_039469624
Ensembl:
ENSOABG00000020478
LinkDB
All DBs
Position
LG1:22333577..22352958
Genome browser
AA seq
2496 aa
AA seq
DB search
MDRTTSATLTLVVFFLCWSCHAKDDAEAQSCPEYQEGFDGSCYEFVDLQRSFRSAEGWCE
RGGGHLAFILNDETQQFLQKHLKPDRNWWLGVAPAAPNLTLDSAATEGVLAWLDSSDVSY
SNWVNLPDDQAACAYVLRHSGFQWEATGNCSQEFNFICQFDSGRSIACDGQNVTLQCGSG
QVIEIDDSFYGRKTIHYCRSQLTPSPTSSQEECSWIDVTDYVTAHCHGLQACQAGVDLST
FGEPCPALGSYLSAEYRCKNGLQLLMSKLAAVFDNVTITVKWLLHPFQGNLTCTVNAGDG
HTIDPYSPEEMESTIIHKFTHPGVFLVGVECTTSDWTVAAQKSITIQEPVGDFSVIMCNG
QNMSTGGAKCNALFNIPIQIQLAVEAGTNVSYTIHREAHLVGNLSVGSGIIPHNITLYAS
MVEKLGHGCHNFTLAASNRVTTRTVSAHLELCLLHPVEGLQASVIAEEDVCPDSGDLIIN
ISLERGAPVELLFTLTGAEDTLSESRDMLADGLQTYTFSSPLKGSLQVNVRATNGLSSSD
VDVDLDKILEVCQNYSDFSLDIDEHTADNVSDSDSDDLKIIATPDTLVDYTQRVTLTVTG
TESLPSKELAYEWECRGDCKCKNKAMDETHVIERDCLPDPFEMFKYILRVKRRTWFRKWA
ELGTASKCVSVVPSKELTDVTISCDNCASINVNDQAKLRLSCVTTCPPVVWYIEDLKPLT
GSLSRCYSKAGRRPPTEKHDGSTEYTIHSQYLKVSRDMQQNITVIAYDKKEPSFVKYTLP
IPDPEPTEPPTNLVFTTDAPMDPSVPSCSISPPSGTVLDAFDITCKTTSFCSTGCLYCFK
TNTGTHLRCSTSNEVRSLFLPLGDANNKYSLSVVVTVKNERKTATSTVVTQVRKSDSSAS
VSTLQSAVEDSVSQLEQQGLLTGEALGQIFASVSDMLNIVSGQHQKDERSKLREQMLTRM
STVLQDCPSNTTQEVQVTARAVAGLTQRSEELSPAAQEEAGSLLVDLSSSLNSISINQHS
TDDVELVQAAAPIVEAASNILNVSSNKKVSEFLLTGINNVQSALLNNKELNGEPAIIDSG
QISVYVNRISPKSMQMLDINAQKNSSSSFSFPALPPHIVSPDEPVDVRMMSFEKNPYSWK
EENITGTVGSVSLTRVNGNVIPVENLPEEIEILLPRLDSGQENSTVLDLANFSTLIIDVP
SPDVTLVLKIDPSEDISVMLFLGYKDYPSDKNYVAKTKIPIENAREEEQFTWVLSPKDRT
EDVGVHYLVIKPIVEPGIKSINASVTVVSIAAQCKYWNETGSFWSEDGCRVGPLTTPLVT
QCLCNHLTFFGSSFFVMPNLVDVSRTAELFATFTNNPVVVCFVGAIFCAYLLMVVWARRK
DMQDSVKVKITVLEDNDPLAQYRYLLSINTGHRHGASTSSQVTITLLGTEGESEPHHLTD
SEKPVFERGGGDMFLLTTHFSLGELQSIRLWHDNSGDHPAWYVSKVMVQDLETGQKWHFL
CNSWLAVDMEECTLDKVFPVATEMDLKRFSNLFFMKTAKDFRDGHIWFSVISRPPCSTFT
RVQRVSCCFSLLLCTMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGVQSSIIMFPIN
LLIVSIFRNTRPREKTTKADAKQGKTVRVSPSMTSSPQKEMKDITPDTVMKDIKKIAQSL
SKAMKSPLPHLELHHGQHADINSLLSLVEDIIRQQNQAAEDFYTDSSKKDQATILSLGAV
NLQETSAWESSEKTLDLAQKKSNKSRYLYRQLQLVEKELGMLGPSQFLNPESYNRAMQQV
HGMKGLLQYHLPMSILDGDKLSCFPGPDESHAGKKKCCQGGLPWWFVFIGWILVIATSGV
SGYFTMMYGLTYGKDRSISWLISMVVSFFESLFITQPLKVLGFAAFFALVLKKVDQEEYG
EPAIEESLRSPDNPDAVQAARRDSTCSFYKPPPPTDIEKMRNNMIKEQKVFALIQEIVVY
MGFMWMLLLVAYGQRDPNGYFLTQHIRKSFSKGISDTMSIQDVFNWANTTLLSNLFGEYP
GFITDGNSKLMGNARLRQVRVQKNSCHIARSMRESIPDCHTTYSWELEDMGSYSPGWTRP
VGHNASANIHDPWKYKSQRKLRAYPIWGNVKLYRGGGFVMDLEPDLQNSSRTLQYLYENT
WFDVYTQAIFVEFTVYNANVNLFCIVTLMLETTATGAFQFRSELQTVRLYQSTGGLHIFV
MASEIIYFLFIIYYMFVQGKLMKKQKWTYFKNKWNLLELAIIILSWSALCVFIKRTLLGN
RDMNYYQNNKEQFVSFHETAKADAVLGYLIAFLVLLATVKLWHLLRLNPKLHMITATLQR
AWTDISGFLVVMTIMFLAYSIASNLMYGWKLYSYRTLLDAVQTMVSLQLGIFNYEEVLNY
NPVLGAFLIGSCIVFMTFVVLNLFISVILVAFTQEQIHHKPSEEDEIVDLMLMKICSLFG
IKCKKEGGDGLSGRPDTSSAPNNTLLTVSSGNIHDG
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaccacttcagctacgctcactttggtggttttcttcctctgctggagttgt
cacgccaaggacgatgccgaagctcagtcctgcccagaataccaggaaggtttcgatggc
tcatgctacgagtttgtggatctgcagcgatcctttcgaagtgctgagggatggtgtgag
cgaggcggaggacacttggcctttatcctgaacgatgagacgcagcagttccttcagaag
cacctgaaacctgacaggaactggtggcttggagtggcacctgctgctcccaacctcaca
cttgactctgctgccactgagggtgttcttgcatggttggacagctcagatgtcagttac
agtaactgggttaacttgccagatgatcaagcagcctgcgcgtatgtcctgagacactca
ggctttcagtgggaggctacaggaaactgcagccaggaatttaacttcatttgccaattt
gattctgggagatcaattgcatgtgatggccaaaatgttacactgcagtgtggctctggt
caagttatagagattgatgacagtttttacggtcgtaaaacaatccactactgccgatcc
caactcacaccctcacccacgtcttcccaggaagagtgcagctggatcgatgtaacggat
tatgtaacggctcactgccacggactgcaggcttgccaggctggagtagatctgagcact
tttggtgaaccatgtccggcgctgggaagttacctgtctgcagagtatcgctgcaaaaat
gggcttcagctgctgatgagtaaacttgcagctgtctttgataatgtcaccatcactgtg
aagtggctccttcatccattccagggaaacttaacatgcacagtgaatgctggggatggc
cacactattgatccgtacagcccagaagagatggagagcacaattatacacaaattcaca
catcctggtgtcttcctggttggagtggagtgtactaccagtgactggactgtcgcagct
cagaagtccataaccattcaggagccagttggagacttcagtgtgatcatgtgtaatggc
cagaatatgtcaacaggtggcgctaaatgcaatgccctctttaatattccaattcaaatc
caacttgcagtggaggcaggtacaaatgtttcctacacaattcatcgtgaagcccattta
gtcggaaatctatcagtgggcagcggaatcataccacacaatattaccctgtatgcaagc
atggtggagaagctcggtcatggctgccacaacttcaccttagctgcatctaacagggtc
acaacccgcacggtgtctgctcatctagagctgtgtctgctgcatcccgttgaaggcctg
caggcctctgtgattgcggaggaagacgtatgtcctgactccggtgatctcatcattaac
atttcactggagcgaggagcccctgtggagctgctcttcacactcactggagctgaggac
actctgtcggagagcagagacatgctcgctgatggcttgcaaacttacacattctccagc
ccacttaaaggatctttgcaagtgaacgtaagagccaccaatggcctttcatcctctgat
gtcgatgtggacttagacaagattcttgaggtttgccagaattactctgacttttcactg
gacatcgatgaacatacagcagataatgtgagtgacagtgactctgatgacttaaaaata
attgctactcctgacactttggttgactacactcagagggttacactgacagtaactgga
acggaatcactgcctagcaaagaactggcatacgaatgggaatgcagaggagattgcaaa
tgcaaaaacaaagcaatggatgaaactcatgtgattgaacgagactgcctcccagatcca
tttgaaatgttcaaatacattttaagagtgaagagaaggacttggtttaggaaatgggct
gaacttggaacagcttctaaatgtgtctctgttgttccttcaaaagaactcacagatgtc
accatcagctgtgataattgtgcttcaataaatgtgaatgaccaggcaaagctaagactg
agctgtgtgacgacttgcccgcctgtagtttggtatattgaggaccttaaacctttgaca
ggtagcctcagtagatgctactccaaagcgggaagacggccccctacggagaagcacgat
ggcagcactgaatataccattcacagccaatatctaaaagtctcaagggacatgcagcaa
aacatcactgtaattgcttatgacaagaaggagcccagttttgtcaagtacacacttcct
ataccagaccccgagccaactgaaccacctacaaacctagtattcacaactgatgcaccg
atggatccctcagtgccctcatgtagcatctccccaccgtcaggaactgtgctcgatgct
tttgacattacctgcaaaacaacttctttctgctctaccggctgtctctattgcttcaag
accaacacaggcacacatctacgatgcagtacttcaaatgaggtgaggtcactcttcctg
cctctcggagatgccaacaacaagtacagtttgtctgttgtggtgactgtgaaaaatgaa
cgaaaaacagcaacgtcaactgtcgtcactcaggtacggaaaagtgactccagtgcctcc
gttagcactctccagtctgcagtggaggactctgtgagtcagttagagcagcaaggtctg
ctcactggtgaggcgcttggacaaatatttgcttccgtttccgatatgctgaatatagtg
agtggccaacatcagaaggacgagcggtcaaagctgagagagcaaatgctgaccagaatg
agtacagttctgcaggactgccccagcaacacgactcaggaagtgcaagtgaccgccaga
gctgtggctggactcacgcagcgctcagaggagctcagtcctgctgctcaagaagaagcg
ggttctctgctggtagacctcagctcctccctcaacagtatcagcatcaatcagcacagc
acagatgatgtagaactggtacaagcagctgcacccatagttgaagcagccagtaatatt
ttgaatgtttcatcaaataaaaaagtctcagagtttcttctgactgggataaataatgtc
cagagtgctctgctgaataacaaagagctgaacggagagcctgccatcattgactctggt
caaatcagtgtgtatgtgaacaggatttctccaaaaagcatgcaaatgctggatataaat
gctcagaagaacagctcctcaagcttttccttccctgctcttcctcctcatattgtctct
ccagatgagccagtggacgtcagaatgatgagttttgagaagaatccatattcttggaag
gaggagaacatcacaggaactgtgggatccgtttccctcaccagagtgaatggcaacgtc
atacctgttgagaacttacctgaagagatagagattctcctaccccggcttgacagtgga
caggagaacagcacagtcctggacctcgccaatttcagcacattaataattgacgtgccc
tctccggatgtaacactggtgttgaaaattgatccttctgaagacatttccgtcatgctc
ttcctgggatataaagattatccaagtgataagaattatgtagccaagacaaagatccct
atagagaacgcaagagaagaagagcaatttacttgggtgctgagtcccaaagacagaaca
gaagatgttggtgtgcactaccttgttataaagcccattgtagagccaggaatcaaatcc
atcaacgccagtgtcactgtcgtctccattgctgcccagtgcaaatactggaatgaaact
gggtctttttggagtgaggatggctgcagggttggtccactcaccacacctttggtcact
cagtgtctctgtaaccacttgactttctttggcagctccttctttgtcatgcctaacttg
gtggatgtgtcacgcaccgctgaacttttcgctacattcacaaacaaccccgtggtggtg
tgttttgtcggagccattttttgtgcttatctattgatggtggtatgggcgcgcaggaaa
gacatgcaagattcagtcaaggtcaagataacagttcttgaggacaacgaccccttggct
cagtatcgttacctgctgagtattaacacaggacaccgacacggtgcatccacttcctct
caggtaaccataactctgctgggtacagagggagaaagtgagccccaccacctgacagac
tcagagaagcctgtgtttgagagaggtgggggggacatgtttctgctgaccacacacttt
tctcttggagagctgcagagcataagactgtggcacgacaactcaggagatcaccctgca
tggtatgttagcaaagtgatggtgcaggatctggagactggtcaaaagtggcactttctc
tgtaactcctggctggctgtagatatggaagagtgcactctcgacaaggtattcccagta
gcaacggagatggatctgaagagatttagtaatctgttcttcatgaagacagccaaggat
ttccgtgacggccacatctggttctctgtcattagtcgacctccgtgcagcactttcaca
cgtgtgcagagagtgtcctgctgtttttccctactgttgtgcaccatgctgaccagcatc
atgttctggggcatccccacagacccctctgagcagacgatggacctgggtcacatcgag
tttacctggcaacaggttatgattggagttcaaagttcaatcatcatgttccccatcaat
ctgctcatcgtgagtatcttcagaaacactcgtcctcgagagaaaaccaccaaagcagat
gcaaaacaggggaagactgtccgagtttctccctctatgacgtcgtccccacagaaagag
atgaaggacatcacaccagatactgtgatgaaggacataaaaaaaatcgctcagtcactc
tcaaaggccatgaagagcccactgccacatctggagctccatcatggtcagcatgctgac
atcaacagtctgctgtctctggtggaggacatcatcagacagcaaaaccaagcagctgaa
gacttctacactgattcttcaaaaaaagatcaagctacgatccttagtttgggtgcagtg
aatctgcaagaaaccagtgcgtgggagagctctgaaaaaactttagatctagctcagaag
aagagcaacaagagccggtacctgtacagacagctgcagcttgtcgagaaggagcttggt
atgttgggaccttctcagtttctaaatccagaaagctacaaccgagccatgcagcaagtt
catggaatgaaggggctcctgcaataccacctacccatgtcaatcctggatggagacaag
ctcagctgtttccccgggccagatgagagtcatgctgggaagaagaagtgctgccaagga
gggctgccgtggtggtttgtgtttatcgggtggatactggtgatcgcaaccagtggcgtg
tcaggatacttcactatgatgtatgggctgacttacgggaaagaccgttctataagctgg
cttatctccatggtggtctccttttttgagagtctctttatcacccagcctttaaaggtt
cttggatttgctgctttctttgccctcgtcctgaagaaagttgatcaggaggaatatgga
gaaccagccatagaagaaagtctcagaagcccagacaatcctgatgcagtccaggcagca
agaagagacagcacctgcagtttctataaaccgccacctcccactgatatcgagaagatg
cggaacaacatgattaaagagcagaaagtctttgcactcatacaggagattgttgtctat
atgggatttatgtggatgttactcctggtggcatacggtcagagggaccccaatggctac
tttctaacccaacacattcgcaagagcttcagcaaaggcatctcagacacaatgagcatt
caagatgtgttcaactgggcaaacacgactctgctgagcaacttgtttggagagtaccca
ggatttatcactgatggaaactcaaagcttatgggcaacgctcgtctccgccaggtgagg
gtgcagaaaaactcttgccacatagctcgatccatgcgggagtctatcccggactgtcac
actacgtactcgtgggagttggaggacatgggctcctacagcccaggttggactcgacct
gtaggtcataatgcttcagcgaacattcacgacccgtggaagtacaagtctcagcgtaaa
ctgagggcctaccccatctggggaaatgtgaagctctacagaggaggagggtttgtgatg
gatctggagccagatttacaaaactccagcagaacccttcagtatctttatgagaacacc
tggtttgacgtgtacacccaagcaatctttgttgagttcactgtgtacaatgccaatgtc
aacctcttctgcatcgtcacactcatgctggagaccacagcaacaggagctttccagttc
cgcagtgaacttcagactgtgcgtctttaccagtcgaccggtggccttcacatctttgtc
atggcctctgaaatcatctactttcttttcatcatctattacatgtttgttcagggaaag
ctgatgaagaaacagaaatggacttatttcaagaataagtggaacctgctcgagttggcc
atcatcattctcagctggagcgccctgtgtgttttcatcaagaggactttactcgggaac
agagacatgaactactaccagaacaataaagagcaattcgtcagtttccatgaaacagcc
aaggccgatgcagtgcttggatatctgattgcctttctggtactgctggctacagtcaaa
ctgtggcacctgctgagactgaaccccaagctgcacatgattacagccacactgcagcga
gcttggactgatatttcaggcttcctggtggtcatgaccatcatgtttctggcctactct
attgcttctaacctgatgtatggctggaagctgtactcctataggactctgcttgatgcc
gtgcagaccatggtcagcttgcagcttggtatttttaactatgaagaggtactgaactac
aatccagtgctcggtgctttcctcatcgggtcctgcatcgtgtttatgacctttgtggtg
ctgaacctcttcatctccgtcattctggtggcatttactcaggagcagatacatcacaag
ccatcagaagaggatgagattgtggacctgatgctaatgaaaatctgcagtttgtttgga
atcaaatgtaagaaagaaggaggagacggcctgtccgggaggccagatacttcctctgcg
ccaaataacacactcttgactgtttcttctgggaatattcatgatggatga
DBGET
integrated database retrieval system
