Oreochromis aureus (blue tilapia): 116317753
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Entry
116317753 CDS
T07295
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04517
IgSF CAM signaling
oau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116317753
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116317753
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oau04812
]
116317753
Cytoskeleton proteins [BR:
oau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116317753
Intermediate filaments
Intermediate filament-binding proteins
116317753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
116317753
NCBI-ProteinID:
XP_031592479
Ensembl:
ENSOABG00000004558
LinkDB
All DBs
Position
LG6:42590950..42619211
Genome browser
AA seq
2346 aa
AA seq
DB search
MTTVAAEYDRMELQQQYSGSNDTVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEHHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLAGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRMELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEVERYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQKVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVTTNANKHSASN
SGYKPCDPQVIQDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSLEHGKDLTGALRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVKAGHFGATKIQER
ISDLQAQWAALEQLAAVRKKRLEEALALHQFQADADDVDAWMLDALRIVSSGETGHDEFS
TQALARKHKDAAAEVASYRPVIDSLHEQVACLPKEEAESEEVRGRLTGIEERYKEVADLT
KLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHSGHPSEKDIKIQQDKLNNRWSLFRELVDRKKESLNSALGVQ
NYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLSEMHGE
AQRLAEEHPDQANAITGRLAEITAVWEEMKNTLKNREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINADRIHEKVTSIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGTLLVSEKPETEAVVKEKLSALHTMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLAGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQVVEKKFQELLEPLQHRRNFLVESREVHQFNRDIEDEI
LWVQERMPVAMSTDHGHNLQTVQLLIKKNQTLQKEILGHQPRIDDILERSQSLLKEESSN
GNAIRRRLADLQQLWKQLMEEVERRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVTMLKKHQIMEQAVEDYAEAVHQLSKTSRGLVANGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHSDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILARILDKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAGRLQSAYAGDKADDIQRRESEVLEVWRSLLEACDGRRLRLLDTGDKFRFFSM
VRDLMLWMDDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLDVRRQQEEEERRRK
PPSPEPVEVQQEEAQQSTVNQNGPPSDQDSPRDGVEDGELVNGVAERRSKEPSPAPSPTS
GRKVKSQSTTLPTTNRDSCSPQEGPLHRKHEWEGHNKKASNRSWHNVYCIINNKEMGFYK
DGKAASQGVPYHNELPISLKDATCDVASDYKKKKHVFKLRIADGNEYLFQAKDEEEMSTW
IQAILNAGAADRSDIQGSSPGTPASGRAHTLPATVTLTTESSPGKREKDKDKDKEKRFSL
FSKKKQ
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtggccgccgagtacgaccgcatggagctgcagcagcagtacagcggcagc
aacgacacggtgaacaaccgctgggacgacgactgggacaacgagaacagctcggcccgc
ctcttcgaacgctcccgcatcaaagcgctcgcagatgagcgggaggcggtgcagaagaag
accttcactaagtgggtgaactctcacctgtccagagtctcctgcaggatcaccgacctg
tacatggacctgagagacggacgcatgctaatcaaactgcttgaagtcctctccggggag
agactgccaaagccaaccaaagggcggatgcggatccactgtctggagaacgtggacaag
gcgctgcagttcctgaaggagcagcgggttcacctggagaacatgggctcccacgacatc
gtggacggaaaccaccgactgacgctgggcctcatctggaccatcatactccgcttccag
attcaggacatcagcgtggagacggaagacaacaaagagaagcgatcggccaaagacgcc
ctgctgctgtggtgtcagatgaagaccgcgggatatcccaacgtcaacatccacaacttc
agcaccagctggagggacggcatggccttcaacgccctcatccacaaacacaggcctgat
ttgatcgattttgacaaactgaagaaatccaacgctcactacaacctgcagaacgccttc
aacctggcggagcatcacctggggctcaccaagctgttggaccccgaggacatcagcgtg
gaccatcccgacgagaagtccgtcatcacctacgtggtgacctattaccactatttctcc
aagatgaaggctctgaaggtggagggcaaacgtatcgggaaggttttggacaacgccata
gagacggagaagatgatcgagaaatacgagtctctggcctcagacctgctggagtggatc
gaacagaccatcatcatcctcaacaacaggaagttcgccaactctctggcgggagtccag
cagcagctgcaagccttcaacacctaccgcacggtggaaaaaccccccaagttcacggag
aaggggaacctggaggtccttctcttcaccatccagagcaagatgagagcaaacaaccag
aaggtgtacatgccccgtgaggggaagctcatctctgacatcaacaaggcctgggagcgg
ctggagaaggcggagcacgagcgcgagctggctctcaggatggagctgattcgtcaggag
aagctggaacagttggccaggcgctttgatcgaaaggcggccatgagagagacctggctc
agcgaaaatcagaggctggtgtcacaggataactttggcttcgaccttcaggccgtcgag
gccgccaccaagaagcacgaggcgatcgaaacggacatcgccgcgtacgaggagcgtgtc
caagctgtggttgctgtggcgaaggagcttgaggtggagcgctaccatgacatcaaacgc
atcacagcccggaaggacaacgttattcgtctgtgggaatatctgctggagctgctgaag
gcccgcaggcagcggctggagatgaacctgggcctgcagaaggtctttcaggagatgctc
tacatcatggactggatggacgagatgaagatgttgctgctgtctcaggattatgggaag
catctgctgggggtggaggacctgctccagaaacacgccttggtggaggcagacattgcc
atccaggccgacagggtgaaggcggtcaccaccaacgccaacaagcactctgccagcaac
agcggctacaagccctgtgaccctcaggtcatccaggaccgggtggcccaccttgagttc
tgctaccaggagctgactcagctcgccgcagagcgacgtgcccgtctggaggagtctcgc
cgtctctggaagtttttctgggagatggcggaggaggaaggctggatccgtgagaaggag
cagatcctgtcctctttggagcacggtaaggacctgacgggggcgctgcgtctcctcagc
cagcaacgtgccctggaggacgagatgagcggccgtgccggccacctgcagcacaccatt
gcggagggccaggccatggtgaaggcgggacacttcggtgccacgaagatacaagagcga
atttccgacctgcaggctcagtgggcagcgctggagcagctggcagcggtgaggaagaaa
aggctggaggaggctctggccctccaccagttccaggctgatgctgatgacgtagatgcc
tggatgctggacgccctgcgcatcgtctccagcggggagaccggccacgatgagttctcc
acccaggcgttggccaggaagcacaaagatgcagcggcagaggtggcaagctacagaccg
gtaattgactcactccacgagcaggttgcctgtctgccaaaagaggaggcggagtcagag
gaggtccgtggtcggctgaccggtatcgaggagcgctacaaggaggtcgccgacctcacc
aagctaaggaagcaggcgcttcaggacgctttggccctctacaaaatgttcagcgaggcc
gatgcctgtgaagtttggatcgatgagaaggagcagtggctgaacagcatggagatcccg
gaaaaactggaggacctggaggtcatacagcacaggtttgagagtcttgagccggagatg
aacaaccaggcgtctcgtgtcgctgtggtgaaccagatcgccaggcagctgatgcacagt
ggtcacccgagtgagaaggacattaagatccagcaggacaaactcaataacaggtggagc
ctgtttcgtgagcttgtggaccggaagaaggagtccctgaactcagctctgggtgtgcag
aactaccacctcgactgcaacgagaccaagtcctggatcaaagagaagaccaaagtcatt
gagtctacccaggagctgggcaatgacctcacaggggtcatggccctgcagcgcaaactg
accggcatggagcgtgacctggccgccatcgaggacaagctaagtgaaatgcacggcgaa
gcccagaggctggcagaagagcaccccgatcaggccaacgccattacgggccgtctggcc
gagatcacggccgtgtgggaggaaatgaagaacacgctaaagaaccgagaggagtctctg
ggtgaagccagaaaactgcagcagttcttacgtgagctggacgacttccagtcgtggtta
tctcgcactcagaccgccatcgcctcagaggacatgcccaacacgcttgccgaagcggag
aagttgatggcccaacatgaaggcatcaagaatgagatccaaaactacgaggaggactat
cagaagatgcgggacatgggcgagatggtgacacagggccagacggacgctcagtacatg
ttcctgcgacaacggctgcaggcgctcgacaccggctggaacgaactgcacaagatgtgg
gagaatcggcagaacctgctgtcgcagtcccacgcctaccagctgttccttcgggacacc
aagcaggccgaggctttcctcaacaatcaggagtacgtcctggctcacaccgagatgccc
acaaccctggagggggccgaggctgccatcaagaagcaagaggacttcatgaccacgatg
gacgccaacgaggacaagattaacggcgtggttgaggccggtaggcggttggccagcgac
gggaacatcaacgccgatcgaatccatgagaaagtcacctccatcgacgacaggcacaag
aagaacagggaggctgcggtggagctgctgatgaggttgaaggacaaccgagacctgcag
aaattcctgcaagactgccaggagctgtctctgtggatcaatgagaagatgctcactgct
caggacatgagctacgatgaggccagaaacctgcacagcaagtggctgaagcaccaggcc
ttcatggccgagctgcagtccaacaaagagtggctggacaagatcgagaaggatggcacg
ctcctggtgtcggagaagccggaaactgaagcggtggtgaaggagaagctgtcggcgctc
cacaccatgtgggaggagctcgagtccaccacgcagaccaaagctcagtgtctgttcgat
gccaacaaggccgagctgttcactcagagctgcgccgacctcgacaagtggttggccggc
ctcgagggccagatccagtccgacgactacggcaaagacctgacgtccgtcaacatcctg
ctgaaaaagcagcagatgctggagaaccaggtggaggtgcgacagagagaggtggtggag
ctgcagagccaggtgaaggctctggggcaggaggtgaaggacacggacgaggtggacggg
cggaggcaggtggtggaaaagaagtttcaggagctgctggagccgctgcaacatcgcagg
aacttcctggttgagtccagagaggttcaccagttcaaccgggacatcgaggacgagatc
ctgtgggttcaggagaggatgcctgtggccatgtccaccgaccacggccacaacctgcag
acggtccagcttctcatcaagaagaaccagacgctgcagaaggagatcctgggccatcag
ccccgcatcgatgacatcctggagcgcagccagagcctcctgaaggaggagtcctccaac
gggaatgcgatccgccggcgcctggccgatctgcagcagctgtggaagcagctgatggag
gaggtggagcgtcggcacggccggctggaggaggcacacaaagcccagcagtactatttt
gacgccgccgaggccgaggcctggatgagcgagcaggagctctacatgatgtcagaggag
aaggccaaggacgagcagagcgccgtcaccatgctgaagaaacatcagatcatggagcag
gcggtggaggactacgccgaggctgtccaccagctgtccaagaccagcagagggctggtg
gccaacggacacccggagagcgagcggatcagcatgcgtcagtctcaggtggataagctc
tatgccggcttgaaggacctgtcggaggagaggcggggcaaactggacgagaggctccgc
ctcttccagctgaatcgagaggtagacgaccttgagcagtggattgctgagcgtgaggtg
gtggccgggtcacacgagctaggacaggactacgagcatgtcaccatgctgcaggaacgt
ttccgggagtttgcccgggacaccgggaacatcggacaggagcgcgtggacgccgtgaac
cggctggcggacgagctgatcaacgccgggcacagtgatgcggccacggtggcggagtgg
aaggacgggctaaacgaggcctgggccgacctgctggagctcatcgacaccaggacgcag
atcctcgccgcctccttcgagctccacaagttctaccacgacgccaaggaaatcctggca
cgcatcctggacaagcagaagaagcttccggaggaggtgggccgggaccagaacacggtg
gagacgctgcagaggatgcacaccacctttgaacatgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgcggggcgcctgcagtcggcgtacgccggagacaaagca
gacgacatccagcgcagggaaagcgaggtgctggaggtgtggcggagtcttctggaggcg
tgtgacggacgccggctccgcctccttgacaccggggacaagtttcggttcttcagcatg
gtccgagacctgatgctgtggatggatgacgtgatccgactcattgaggcccaggagaac
cccagagacgtttcgtcggtggagctgttgatgaacaaccaccagggcatcaaggcggag
atcgacgcccgcaacgacagcttcacggcctgcatcgagctcgggaaggctttgctggcc
aggaagcactacgcttcagaggagattaaagagaagctgctacagctcaccgacaagagg
aaggagatgattgacaagtgggaggaccgatgggagtggctgcgactgatccttgaggtc
caccagttctctcgggacgctggcgtggccgaggcctggctgctgggtcaggagccctac
ctgtccagcagggagctgggccagagcgtggatgaggtcgagaagctcatcaaacgccac
gaggccttcgagaagtccgccgccacctgggaggagcgcttctccgccctggagaggctg
actacgctggaactgctggatgtgaggaggcagcaggaggaggaggagaggaggaggaag
ccaccatctccggagcctgtggaagttcagcaggaggaggcgcagcagagcaccgtcaat
cagaacggaccgccctcggaccaggattctcccagggacggcgtggaggatggagagctg
gtgaacggtgttgccgaacggagatccaaagagccgagtcccgccccctcgcccacctct
ggcaggaaggttaaaagtcagtcgaccacgctgcccaccacgaaccgggactcctgctcg
ccccaggagggaccgctgcaccgcaaacacgagtgggagggccacaacaagaaggcttcc
aacaggtcgtggcacaacgtgtactgcatcatcaacaacaaagaaatgggtttctacaag
gacggcaaggcggcgagccagggcgtgccgtaccacaacgagctccccatcagcctgaag
gacgccacgtgtgatgtcgcctcggactacaagaagaagaaacacgtcttcaaactcaga
atcgccgatggaaacgagtacctgttccaagccaaagacgaggaggagatgagtacctgg
atccaggccatcctgaatgccggcgccgccgaccgctctgacatccagggcagcagcccc
ggcacgcccgcctccgggcgtgctcacacgctgccggccaccgtcacgctcaccaccgag
tcgagtcctggaaagcgcgagaaggacaaagacaaagacaaggagaagcgcttcagcctg
ttcagcaaaaagaagcagtag
DBGET
integrated database retrieval system
