Oreochromis aureus (blue tilapia): 116317820
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Entry
116317820 CDS
T07295
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04145
Phagosome
oau04514
Cell adhesion molecules
oau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116317820
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116317820
09142 Cell motility
04810 Regulation of actin cytoskeleton
116317820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116317820
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oau04147
]
116317820
04515 Cell adhesion molecules [BR:
oau04515
]
116317820
04090 CD molecules [BR:
oau04090
]
116317820
00536 Glycosaminoglycan binding proteins [BR:
oau00536
]
116317820
Membrane trafficking [BR:
oau04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116317820
Exosome [BR:
oau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116317820
Cell adhesion molecules [BR:
oau04515
]
Integrins
Integrin alpha subunits
116317820
CD molecules [BR:
oau04090
]
Proteins
116317820
Glycosaminoglycan binding proteins [BR:
oau00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116317820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
DUF11
Copine
vWA-TerF-like
DUF3656
Motif
Other DBs
NCBI-GeneID:
116317820
NCBI-ProteinID:
XP_039472536
LinkDB
All DBs
Position
LG8:17778214..17789701
Genome browser
AA seq
1128 aa
AA seq
DB search
MEWAISVTTLLSVLNAALCFNIDPVAWKTLRSAAAGFGYQVVQRQSDLLVSAPLEQYSQN
ERGKIYKCTTSSQNCQNIEFEAPGFAVNMSLGLTMKSDPTAQNTVVCGPTIPNDCKSITM
YNGVCFEMDHSSTFGTSRPDFIQACPPQADIAFLLDGSISVSSRDFQTMKKFVKDLIQSL
LSIDAQFSVSQFSTSPQVHFYCTRFSSSRSLETTIKEISKLGGTTYTAKAIKHVVEKVFI
PQRGSRPNVKKVLIVITDGQSHDRNYLHSAVQLAESKSIVRFAIGVGNAFTKTEAKRELH
TIASSPSDKYVFQVKNFNALEIIRQNLRDKIFSIEGSQSSGESLKMEMSQEGFSAVYVPE
GIQMSIVGANQWKGGYVQYTTGGQKLKTYEDVSLEPDSYLGYSMAIAITRNGTLTIVGAP
RYKHRGVVVAVNRQSFENQKIEPFSSQYQTGEYFGAEVCAMDINNDDITDLIFISAPMYM
EPDREGRVYVCSLTGLFVDCNFDDPLVLRGHAAVKGRFGSSLAVLPDLNSDGFRDLAVGA
PLENNGEGSIYIFNGEGGGRIIPTYSQRITGSEVESGLKFFGLSISQSSFDQSGDELIDL
AVGSKGTVVLLRSRPIVMVEAEVSFSPIQIPTQNVDCSKPLENTAEICFTMSTKSTVNTA
QARINYTLTLDATRKPPKNRAYISGKQQEESGSVIIDLRRKKCSTVKFLIEACPEDALNE
LSNDLEFLFYGLPSNTNLRPSLSQQAQTTTMYPLGFEINCSTDNKCVDNLKVDFNFTRSS
EVKVGIDELLNVTVTVENRGENSYNSRVILTYPAGLSYRKFTSQQGRIECNSLDSEDGLS
QGRTDCTIDKPIFKSKTKASFIVSYEIKTNCQLERKIFVTADITSGNQEHAPTSELYKKQ
WIDVKYSIFMTFESSLSYNNFTFGMTFQKPVQQSIKVTNDIRALNFTVVIRVPVKLGEKD
IWVDLSSLQISDCQSGNDEEPGVTDFVPKIQKDKVVDCSVARCRVFKCNTFTARLQSRMY
KISANLSSGWIEQIRLQSAKFLLTSTASLEYDETQYIYFSTGSNSNPPVYKIEAEVEVYP
EPNFTKEIIGGSLGGLAFLALLTVGLYKAGFFKSKFKQMITENVKDSS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaatgggcaataagtgttacaactttattgtcagtgttaaatgctgcactttgtttc
aacattgatcctgtggcttggaagaccctgaggagtgctgctgctggctttggctaccaa
gtggtccaaagacaatcagatttgctcgtcagtgcaccacttgaacagtattcacaaaat
gaaagagggaaaatatataagtgcaccacctcctcccaaaactgccaaaacattgaattt
gaagcaccaggttttgcagtcaacatgtcgcttggtttaacaatgaaaagtgatcccaca
gcacaaaacactgtggtgtgtggtccaaccattccaaacgactgcaaaagtatcaccatg
tacaacggtgtgtgctttgagatggatcactctagtacatttggaacatccagacctgat
tttattcaagcgtgcccgccccaagcagacattgcctttttgttggatggttcaatcagt
gtgtcttctagagattttcaaacaatgaagaagtttgtgaaagatctaatccagtcattg
ctttcaattgatgcacagttttctgtttcccagttctctacttcaccacaggttcatttt
tactgcacaagattttcgtcatctagatcactggagactacaatcaaagaaattagtaaa
ctaggaggaactacttacacagcgaaggccatcaaacatgttgtggaaaaagttttcata
ccacaaagaggttccagaccaaatgtgaagaaggtcttgatagtaattactgatgggcaa
tcccatgatcgaaattatctgcacagtgcagtacagctagcagagagtaaaagcattgtt
cgatttgctattggggtgggaaatgcatttactaaaactgaagcaaaacgagaactgcac
accattgcatcatctccttcagacaaatacgtgtttcaagtgaagaacttcaacgcactt
gaaataataagacagaatctgcgggacaaaattttctccattgaaggatctcaaagcagt
ggagagtcactgaaaatggaaatgtctcaagagggattcagtgcagtttatgtgcctgag
ggaattcagatgtctattgttggtgcaaaccagtggaagggaggctacgtgcaatacaca
acaggaggccagaagctgaaaacatatgaggatgtgtctttggagcctgacagttatctt
ggttactccatggcaattgctataaccagaaatggcacactgacaattgttggtgctcca
agatataaacacagaggagttgtggtcgctgttaacagacaaagctttgaaaaccaaaag
attgagcccttttcatcacagtatcagactggtgaatatttcggggcagaggtgtgtgcc
atggacataaataatgatgacatcactgatctaatcttcatatcagccccaatgtacatg
gagcctgatagagagggaagagtttatgtttgcagcctaactggtttgtttgtggattgt
aattttgatgatccgttagtactaagaggacatgcagctgtcaaaggaaggttcggctct
tctcttgctgttctgcctgatctaaactcagatggattcagggatttggcagttggagca
cctttggagaataatggtgaaggcagcatctacatatttaatggtgaaggaggaggaaga
atcattcctacttactcacagagaattactggctctgaggtcgagtcaggactgaagttc
tttggcctgtcaatcagtcagtcatcttttgaccagagtggtgatgaacttattgattta
gcggtgggttcaaagggcacagttgtcttactgagatcaagacccatagtaatggttgaa
gctgaggtgtcattcagcccaatccaaatccctactcagaatgtagactgctcaaaacca
ttggagaacacagctgaaatctgctttactatgagtacaaaatctacagtcaacacagct
caagcgaggattaattatactttaacgctggatgccactcgcaaacctccaaaaaaccga
gcttacatcagtgggaaacaacaagaggagtccggatcagttattattgacttaagaaga
aaaaagtgttcaactgtaaaatttcttattgaggcctgtccagaagatgctcttaatgaa
ctttccaatgatcttgaatttttgttttatgggttgccctccaacacaaatctcagacca
agtctttcccagcaagctcaaacaacaacaatgtatccattggggtttgagattaactgc
agcactgacaacaaatgtgttgataacctgaaagtggatttcaacttcaccagatcctca
gaggttaaagtgggtattgatgagcttttgaatgtcacagtcacagtggagaacagagga
gaaaactcctacaacagtcgtgttattctcacatacccagctggactctcctacaggaag
ttcacgagtcagcagggaagaattgagtgcaactccttggacagtgaagatggtttatca
caaggaaggacagactgcactattgacaagccaattttcaagagcaaaactaaggcttcc
ttcattgtctcctatgagattaaaaccaactgtcaacttgagagaaagatttttgtcact
gcagatatcaccagtggaaatcaggagcatgccccaacaagtgaactctacaaaaagcaa
tggattgatgtgaaatacagcattttcatgacatttgaaagctcccttagctacaacaat
ttcacatttgggatgacatttcagaaaccagttcaacagtcaatcaaggttacaaatgac
atcagagcgcttaatttcactgtggtgatcagggttccagtgaaacttggtgaaaaagac
atttgggtggatttgagcagcctacagatttcagactgccagagtggaaatgatgaagaa
ccaggtgtcacagattttgttccaaagatacaaaaggataaagtggtggactgctctgta
gccaggtgcagagtgttcaagtgcaacacattcacagcaaggctgcagagtaggatgtac
aaaatctctgccaacctcagttcaggatggatagagcagattagacttcaatctgccaaa
tttctcttgaccagcacagccagtctggagtatgatgaaacccagtacatctacttttca
acagggtccaacagtaatcctcctgtatacaagatagaggcagaagtagaagtgtatcca
gagccaaattttaccaaagagatcattggaggatccctgggaggtttggcctttctggct
ttacttactgttggcctgtataaggctggatttttcaagagtaaatttaaacagatgata
actgaaaatgtaaaagacagcagctaa
DBGET
integrated database retrieval system