Oreochromis aureus (blue tilapia): 116317830
Help
Entry
116317830 CDS
T07295
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116317830 (gigyf1a)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116317830 (gigyf1a)
Surveillance factors
Other surveillance factors
116317830 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
116317830
NCBI-ProteinID:
XP_031592568
Ensembl:
ENSOABG00000003706
UniProt:
A0A668S215
LinkDB
All DBs
Position
LG3:12373566..12397949
Genome browser
AA seq
1066 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYVKDNKVPEDM
QDKEFAAILQEEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGAAPAGVVRGRG
ATRGGRGRGRGEGGFYQRSIEDAEVGFGRSVREIHRSQSWDDRGERRFEKPLRREVGRPG
FEETGGPGGPGRKEYTRADSDNWRTLREEQEEDEGEPGSNWRLAGARRDDGGPRSAGWRD
HSGPGEGRRRKFDFDFRDSDGHGGGRRRAGSDGLEDDRDGLPEWCTDEEDGEMGTFDSSG
AFMPMKKSGKETILEEFEFKGIEEEEEEGDSLADMERNSAEGDKDKEIKEAISVVGDGET
KPASPSSSPTAHCPPPSLESQPSSACQVVDNAQLSNSQSVKASSTPGEDAAPLGGSKAQL
SPSAAATSSNLPPPPPSSAAPLLPPSGGDAEDDEGMKHLQQEAEKMVASLQDTSLEEECF
TQALQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMTLLVK
RGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQLPPTQRPQPNRGPAGTGNLDQERLK
KQQELAAAALYQQLQQQQQLFQLMNRCSEQSMMPSMNRSMSVPDTGSMWDMHTSASQPSG
GEASLWDITMNPSTQGPTLEQLQKLQQERRDAELRAKREEEEQRKRREEKRRQQEEQKRR
EEEEIFRRKQCRQQQELIMKLLQQTPQQQGPGAGSSSWSGASSSGLSKGGKSQALALLEI
QQETERLLKQQQRAQQQRDRHSGLSMGSSSMGGQWVDGVGMWGGPGSLESKSSSGGSSGS
MGMWDEAVKNQTGLRGNSNNNMGLKNSRSSPSLSDQYMIRRKRTEEEEKLLKLLQGMKPQ
DGFTTWCEQMLHALNTSANNSSSSVDVATIVAYLKEVESPYAVLDFIRSYLGDTVEAKEF
AKQFLERRAKQKANQQRQQQQLSKEVAGLNMNFPLQDSMRGMNPNTLQSMFQANHMGKAG
LYDNQGGKMKKKQPMMLHSDPSILGYSFHNTGDCMSLNEMEMVEDY
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtctccccctccttcccccgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatgtcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaagaagagcccatgcagccactggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtggcagtgctg
aggctcatgggaaaaggagtgggtggtgcggccccagctggagttgtccgtggacgagga
gccacacggggtggtcgaggcagaggccgtggtgaaggtggattctaccaaagaagtatt
gaagatgccgaggtgggtttcggtcgcagcgtccgagagattcaccgaagccagagctgg
gacgaccggggtgagcgtcgatttgagaagccgctgcggcgggaggtgggacgtcctggc
tttgaagaaactggaggtcccgggggtccggggaggaaagagtacacaagggctgacagt
gataactggcgcaccctacgggaggagcaggaggaagacgaaggggagccgggcagtaac
tggagacttgctggagcccgtagggatgatggtggtcctcgctcagcgggctggcgggac
cacagtggtccaggagaaggtcggaggaggaagtttgatttcgacttccgggactctgac
ggtcacggtggcgggcgtcggcgggcaggcagcgatggtctagaggacgatagggatggc
ctgcccgagtggtgtacagatgaggaggatggggagatgggcacttttgactcgtctgga
gcgttcatgcctatgaagaagagtggcaaggagacaatcctggaggagtttgagtttaag
gggattgaggaggaggaagaggagggagacagccttgctgatatggagaggaacagcgct
gaaggagacaaagacaaggagattaaagaagccatctctgttgttggagatggtgagaca
aagccagcatctccttcgtcttctccaacagctcactgtccccctccatcgctggagtcc
caacccagcagtgcttgtcaagtggtggataatgctcagctgagcaacagccagtctgtg
aaggccagcagcacgcctggtgaagatgcagctccattagggggctccaaggcccagctg
agtcccagcgccgcagccacctcttccaacctgcctcctccacccccctcgtctgctgct
cctctcctcccgccatctggaggagacgctgaggacgacgaaggcatgaaacacctgcag
caggaggcagagaagatggtggcatcactgcaggatacttctttggaggaggagtgcttc
acccaggctctgcagcagcaggagagcaggaacacggcagctgctctgccgctatctcac
gaggctgccatgaagtggttctataaggacccccagggagagatccagggtccattcacc
acggtggagatgtgtgagtggtttcaggctggctacttcaccatgaccctgctggtgaag
cggggctgtgatgaaggtttccaacccctgggggatgtcatcaagatgtggggccgcgtg
ccctttgccccgggtccctccccgccgcccctgctggtgagacagctaccaccaacgcag
cgcccgcagcccaaccgggggcccgccgggactggaaacctggaccaggagcgcctgaaa
aagcaacaggagctcgcagcagcagctctttatcaacagctccaacagcagcagcagcta
ttccagctcatgaacaggtgcagtgagcagagtatgatgccttcgatgaacagatcgatg
tcagtgccagatacagggtccatgtgggacatgcatacctcagcttcacagccgtcaggt
ggtgaagccagtctttgggacataacaatgaatccttctactcagggtccaactctcgaa
cagcttcagaagctccagcaggagaggcgagacgctgaactcagggcgaagcgtgaggaa
gaggagcagcgtaagcgaagggaggagaagagaaggcaacaggaggagcagaaaaggagg
gaggaggaggagatcttcagacgcaagcagtgtcgtcagcagcaggaactgatcatgaaa
ttgctgcagcagaccccccagcagcaaggaccgggggcaggcagctcaagttggagtggg
gcttcctcctctgggctttctaagggaggaaagtcccaggctctggctttgctggaaata
cagcaggagactgagagactcctgaagcagcagcagagagcccagcagcagagagaccgc
cactctggtttgtcgatggggagctcctccatgggagggcagtgggtggatggcgtcggc
atgtggggagggccgggtagtctggagagtaagagcagtagtggagggtcttcgggcagc
atgggcatgtgggacgaggctgtgaagaaccagaccggcctgcgtgggaacagcaacaac
aacatgggccttaagaacagtcgcagcagcccatcactcagtgatcagtacatgatccgt
cgtaagcgcaccgaggaggaggagaagctgctgaagctgctgcagggcatgaagcctcag
gacggcttcaccacctggtgtgaacagatgctgcacgctctcaacacctctgccaacaac
tcctcctcctctgtggatgttgccacaattgtggcatacctgaaggaggtggagtctccc
tatgcagtgctggatttcatccggtcctacctaggggacacagtggaagccaaagagttc
gccaaacagtttctggagcgacgtgccaaacagaaagccaaccaacagagacagcagcaa
cagttatcaaaggaagtggctggattgaacatgaacttccctctgcaggattcaatgcga
ggtatgaatcccaacactctgcagtccatgtttcaggccaaccacatgggcaaggctggt
ctctatgataaccagggaggaaagatgaagaagaaacagcccatgatgctgcactctgac
cccagcatcttagggtactcattccacaacacgggcgactgtatgagcctgaatgagatg
gagatggtggaggattactga
DBGET
integrated database retrieval system
