Oreochromis aureus (blue tilapia): 116317960
Help
Entry
116317960 CDS
T07295
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116317960 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116317960 (nup50)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116317960 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
116317960
NCBI-ProteinID:
XP_031592720
Ensembl:
ENSOABG00000000502
LinkDB
All DBs
Position
LG17:complement(22564642..22571454)
Genome browser
AA seq
466 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEGEEAGTFSVASEDVLKNRAIKKAKRRNTGTESEGSGAFKG
FKGFSLTAAASSSSAPTPFSGFGNGGSFKGLGGLTNGNGVTPSFGGFSSPAASSSAPGLT
FNGPSSAKPAADIATKQTNGSAPSASQSSSSSNKEYSRQLTALNCSVRDWITKHVNDNPL
CDLNPIFRDYERHLASIERQYGGGSADGGSEEKKHGGTLPATAAVLPPPSSSSGSSSAAS
TPAALFSFTKNTTDDSTREKSSAAAPIPAGVTFNFGQKVDSSVLGSLGNKSTPPSFSFSS
SSSSSQTSVFGAPGSAAPLSFSGAKAEDAQPTDENGDEESEEPPKPEVKEVKEDDAFYSK
KCKMFYKKESEFKDKGVGTLHLKNTPEGKTQMIIRADTNLGNILLNIIVQSSMPCTRVGK
NNVMVVCVPNPPVDEKNPTTPVPLLIRVKTSEDADELHKILEEKKA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgctgataaggagctcacggacaggaactgggatcaggaggaggag
ggcgaggaggccgggacgttttcagtggcgagtgaagatgtgcttaagaatcgagcaatc
aagaaggccaaacgcagaaacactggaaccgagagcgagggcagtggagcatttaaaggc
tttaaaggcttctctttgaccgcggcggcaagcagcagctcagctccaactcccttctcc
gggtttgggaatggcggaagcttcaaaggcctcggcggtttgacgaatgggaacggcgtc
acgccctccttcggaggtttctcctcacctgcagcgtcctcgtctgcacctggtctgacc
tttaacgggccatcctcggctaaacccgccgctgatattgccaccaagcagaccaatggc
tccgcccccagtgcgagtcagagctccagcagcagcaataaagagtacagccggcagctc
acggcgctcaactgctcagtgcgggactggatcaccaaacacgtgaacgacaacccgctg
tgcgacctcaaccctatcttcagggactacgagcgccacctggccagcattgagcgccag
tatggcggcggatcagctgacggaggctctgaggagaagaagcatggagggacgctgcca
gccacagccgcagttcttcctcctccttcatcttcctccggcagcagctcggcggcctcc
actcctgctgccttgttctccttcaccaaaaacacaacagacgactcaacccgggagaaa
agctccgccgccgctccaatccctgccggagtcacgttcaacttcggccagaaggtggac
agctcggttctgggctccttagggaacaaatcgactccccccagcttctccttctcctcc
tcctcctcctccagtcagacctcagtgttcggagctccaggatcagccgctccgctgtcc
tttagtggggcgaaagccgaggacgctcaacccacagacgaaaacggtgacgaggagtcg
gaagagccgcccaagcctgaggtcaaagaggtgaaagaggacgatgctttctactccaag
aagtgtaaaatgttctataagaaggagtcggagttcaaagataaaggagtgggaacgctg
cacctcaaaaatacacccgaggggaaaactcagatgatcatccgagccgacaccaacctg
ggaaacatcctgctgaacatcatcgtgcagtcatccatgccatgcactcgggtggggaag
aataacgtgatggtggtgtgcgtgccaaatccgcccgttgacgaaaagaaccccaccacc
cccgtccccctgctgattcgggtcaaaacctccgaggacgcagacgagctccacaagatc
cttgaagagaagaaagcctga
DBGET
integrated database retrieval system
