KEGG   Oreochromis aureus (blue tilapia): 116318098
Entry
116318098         CDS       T07295                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
oau  Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:oau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oau04121]
    116318098 (hltf)
   03400 DNA repair and recombination proteins [BR:oau03400]
    116318098 (hltf)
Enzymes [BR:oau01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116318098 (hltf)
Ubiquitin system [BR:oau04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116318098 (hltf)
DNA repair and recombination proteins [BR:oau03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    116318098 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 DEAD zf-RING_2 zf-RING_UBOX RING_XB3-XBAT31 ResIII zf-RING_5 zf-C3HC4_4 Prok-RING_4 HDA2-3 zf-ANAPC11 DUF5817 zf-rbx1 zf-RING_6 zf-Nse AAA_34 zf-RING_4
Other DBs
NCBI-GeneID: 116318098
NCBI-ProteinID: XP_031592888
Ensembl: ENSOABG00000021289
LinkDB
Position
LG19:10886542..10898029
AA seq 968 aa
MQFNRRWKFGWGRFSEVDLFTDRHESNAETLSQAIRAAASEEPDADGSVLFGQLKGTVVG
LRYYSGVVNQGEMVGLVRQPQNPYDRNAVMVANIYGNQVGHIKKELAAAMAYIMDNNLAK
VEGVVYSGTKNTYTMPVMLSFWGKEESKNSVLEHMSRRGYKLNTEGGKLKGDNQQWYSRQ
DARAYSSKKGVTTALTADELKNAFDNLFEGLMESKDGEKEAAVSVATPLLLHQKQALSWM
CARENKAALPPFWEKRGELYYNTLTCFSAKELPERVRGGILADDMGLGKTLTVIALILTN
FHKGKPLPVEKCVEKVSPIKAKTTSQMALTLEGSSSSGGAGVSGTSSGSNLTQEDVICVD
EPDGVKAADKSEKSKSKEKMKATKRKPSKERSVLFEDLDFAAALSGSTSDTGSKKKKTDK
KSSLTQSAESSIAESTDDLKARTTLIICPLSVLSNWLDQFEQHVDPNVKLNVYLYYGPER
NRSKKFLSSQDVVITTYNVLSSDFGNKSPLHGISWLRVVLDEGHIVRNPNAQMSKAVLDL
KAQRRWILSGTPIQNSVRDLWMLVAFLGLKPFDTREWWNRVIQRPVTQGDRAGLQHLQTL
VKCITLRRTKNSEVNGRPLVSLPEKKVYVEQVELSQPEREEYELARTEGKNTIGRYVAEG
TVLRNYADVLAILMRLRQHCCHPDLLAKISSDLGAAATPAELRERLIEKLRLVLASGSDE
ECSVCLDSVRLPVITHCAHVYCRPCIAQVISTSGQEVARCPLCRSEIKTSELVEFPQEEM
EEENSTKSERWRTSSKVQALMGNLLRLRSKDSSIKCLVVSQFTRFLTILETPLREHGFSF
VRLDGTMTQKKRTQVIQEFQNSAADSPTIMLLSLKAGGVGLNLTAASHVFLMDPAWNPAT
EEQCIDRCHRLGQKRKVVVTKFIVKDSVEENMVKIQRNKQDLMEKAFGSTNTDRKTSRID
DIVALMEL
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgcagttcaaccgcaggtggaagtttggttggggcaggttcagtgaggtggacctcttc
acagatcgccatgaatccaatgcagagactctctcacaggccatcagagctgcagcgtct
gaggagcccgatgcagacggcagcgtgttgtttggccagctcaagggaaccgtggtcggc
ctcagatattactcaggggtggtgaaccaaggggagatggtcggtttagtgcggcagcct
cagaatccatatgaccgcaacgcagtgatggttgccaacatttatggaaatcaagtcgga
cacatcaagaaggagctggcagcagcaatggcttacatcatggacaacaacttagctaaa
gtagaaggggtggtatactcagggacgaaaaacacctacaccatgccggtgatgctgtcc
ttctgggggaaagaagagagtaaaaattctgtactggaacatatgtcacgccgaggatat
aagctgaacacagagggaggcaaactgaaaggcgacaatcaacaatggtatagtagacaa
gatgctcgcgcatattcatcaaaaaaaggtgtgaccactgcactgactgctgatgagcta
aaaaatgcatttgataaccttttcgaagggttgatggagagtaaggatggagagaaagaa
gctgctgtgtctgtggctactcccctcctgctccatcagaagcaggcgctgtcctggatg
tgcgctcgcgaaaacaaagctgccctgccgccgttctgggagaagagaggcgagctctac
tacaacaccctcacgtgtttctctgccaaagagctaccagagagggttcgtggaggcata
ctggcagatgacatggggctgggtaaaactctgactgtaattgcactgattctcaccaac
tttcacaaaggaaagccgctgcctgtggagaaatgtgttgagaaggtttcacccattaaa
gctaaaacgacgtcacaaatggccctgacactggaaggaagcagcagttcaggtggagct
ggagtgagtggcacatcaagtggttctaaccttacccaggaggacgtgatctgtgttgat
gaaccagatggagtgaaggcagcagataagtcagagaaaagtaagagcaaagagaagatg
aaagcaaccaagagaaaaccaagcaaagagcgatcggtgttgttcgaggatctggacttt
gctgcagctctgagtggctcaacatctgacacaggctcaaagaagaagaaaacagacaag
aagtccagtctcactcagagtgctgaatcctccatcgctgaaagcacagatgacttaaaa
gcaagaacaactctcatcatctgccccctctctgtgctcagtaactggctggaccagttt
gagcagcatgtggaccctaatgtgaagctgaatgtgtatttgtattacggtccagagagg
aacaggagtaaaaagtttctgtcctctcaggatgtggtgatcaccacgtacaatgtcctc
tcttctgattttgggaataagagtcccctccatgggatcagctggctgagggttgtgcta
gacgagggacacatcgtaagaaacccaaatgcacaaatgagtaaagctgtacttgacttg
aaagctcagagacgctggattctttcaggtactcccatccagaacagtgtgagggatctg
tggatgctggtggccttcctgggtctgaagccctttgatacgagagagtggtggaacaga
gtgatccagagacccgttacgcaaggagacagggccggcctgcaacaccttcagacacta
gtgaagtgcatcaccctgagacggaccaagaacagtgaggtgaacgggcggcctctggtg
tcactgcctgagaagaaagtctacgtggagcaggtagagctcagccaaccagagagggag
gagtacgagctggcacgcactgaaggaaaaaacaccattggcagatatgtagctgaaggg
acagtcttgaggaattatgctgatgtgcttgccattctcatgaggctccgacagcactgc
tgccaccctgacctgctggcaaagatttcctcagatttaggtgctgcagcgacaccggca
gagctgcgggagcgtctcatagaaaagctgcggttggtgctggccagcggctctgatgag
gagtgctccgtgtgtctggactcggtccgtctgcccgtcattacacactgtgcccacgta
tactgccggccatgcattgcacaggtcatcagcacttcaggacaggaggtggcacgctgt
cctctgtgtcgaagtgaaatcaagaccagcgaactggtggagtttccacaagaagaaatg
gaagaagagaatagtacaaagtctgagaggtggaggacaagctcaaaggtgcaagcactc
atgggaaacctgctcaggttgcgatctaaagacagcagcataaagtgtttggtcgtctct
cagtttacacgcttcctcaccatcctggagactccactcagagagcatggcttcagtttt
gtgcgtttggacggcaccatgacccagaagaaaaggactcaagtcatccaggagtttcag
aactcagcggccgacagccctaccatcatgctcctgtcactcaaagccggaggagtgggg
cttaacttgactgctgcctctcacgtttttctcatggaccccgcatggaacccagctact
gaagagcagtgcattgaccgctgccaccgtttgggccagaagaggaaagttgtagtcact
aagttcattgtgaaggattcagtggaggagaatatggtgaagatccagaggaacaaacag
gacctgatggagaaggcattcggctccacaaacactgacaggaagacatctcgcatcgat
gacatcgtagctctgatggagctgtag

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