Oreochromis aureus (blue tilapia): 116318142
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Entry
116318142 CDS
T07295
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04517
IgSF CAM signaling
oau04520
Adherens junction
oau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116318142
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116318142
04530 Tight junction
116318142
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_6
PDZ_2
RA_2
Motif
Other DBs
NCBI-GeneID:
116318142
NCBI-ProteinID:
XP_039459427
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All DBs
Position
LG19:complement(10266448..10280719)
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AA seq
1234 aa
AA seq
DB search
MPEEDERDKLGKVIRQWNNNRLDLFEISQPDENLEFHGVMRFYFEDAAEGNVATKCLRVC
SNSVTREIIDTLSEKFRPDMKMLTTSYALYEIHNNREECKLDLNERPLVVQLNWNSDNRE
GRFVLKKDKDSVEEKFEEKEKGGLIQNFKRTLSRKGKKKERNSNTDDKASEDENGPAESP
LNNDSICLSNLEAQKYCTEKKRPERQAAADQAGLPIGVRFSDNFAEPFLSAVINYTNSST
VHFKLSPAYILYAACRFALQRRYGQDSRPSEHADSVTSISNKMVSMTGKVIQRQQTIGGA
LAFWMANSSELLNFLKHDQDLSPLTQQSQLDLSHLVHKAYSCLLQCLQNELRKHLPTFLI
DPEQYGSLPAGIGAEMVLNTLMNTMSLLRRCQVNPALTIQLFSQLFHYISIWLFNQLMSP
EASTPGLRSHYWGAALRQRLTTIEAWAERQGLELAADCHLGHIIQATILLTMNKYSMQDA
KDIQTTCFKLNSLQLHMLLAGYLYATNEPHIPPDLIDAVVTAAEASADNLIRSEGRDIQL
EESLDLHLPFLLPEGGYSCDTVRGIPQGFREFLEPMCQKGLCSLTPQPNSKGDWTIYFSE
SAPSVDHTYLAGHRQPEIMTITLNKPLNSGMGVSIVAAKGAGQRNLGIYIKSIVKGGPAE
MNGQLTAGDQLLSVDGQSLVGLSQERAAAIMMQTGPIVTLQVAKFAASYHGLEALLREST
PEKTTGDRDHAKPNNKACIKYSTEDHSPSEQLHGGSRRKKEQIMQRNRQLYRSNPNMAAD
FCLEDGDKLVDPFTGNSTASVATMNLCSDKFHWEYMTLPNPRSQDRNVSEPSKPQQTFQV
SLKPLPGQSSNRSLNVMRQALSQENLCTDSGGPLLDKSQSKWTQKDQGAKRTENYCTSFP
IRSCLSTHDILSDNSSPTNQHQVSRVSCAGVWRTPFSQHSTSTPSIQPIRIDIPLTRAVS
HQSNPPLTTFQQSSSSLAVKMSQTLQINGHKQNPQSQASITYACPVSPTKKLLQPSLSSQ
KFNTHKDQVAKPQVSITPTKHVSFQEPPCQQKKSTGPMKQKDPLEMSDPWKREAQEKLEK
QQRLEAVEFLQQEMQELQAKAKRTAEENNRLRKLNLEWQFQKRLQEIQQRGDDEDEDKDL
DMMVMIQQLEKSMSQTKNNTRSSGGKDKTEKQVGTHLSKKEDEEKRAQRLSGLAHDVHQA
ASKENQEEKMKRASAPEKLTFKQRQRLFSLASSS
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaggatgaacgagataagttaggcaaagtcatcagacagtggaacaataac
agactggacctgtttgaaattagccaacccgacgagaatctagaatttcatggcgtgatg
cgcttctacttcgaggatgctgctgaaggcaacgtggccacgaagtgtctgcgcgtctgc
agcaactcagtgactcgtgagatcattgacacgctgtcagagaaattcaggcccgacatg
aaaatgctgactactagttatgccctgtatgaaatccacaacaatagggaagaatgcaag
ctggatctgaatgagagacctttagttgtgcaattaaactggaactcagacaacagagaa
ggacgctttgtgctcaagaaagacaaggacagtgtggaggaaaagtttgaggagaaagag
aaaggaggcttgatacaaaactttaagaggacgctgtcaagaaaaggaaagaagaaagag
aggaacagcaacacagatgacaaagcttcagaggatgagaatgggccagctgaaagtcca
ctcaacaatgacagcatttgcttgtctaaccttgaagcacaaaaatattgcacagaaaag
aaaagaccagagaggcaggctgctgcagatcaagctggattaccgattggcgttcggttc
tctgataactttgcagagcccttcctgtctgcagttataaattacaccaacagctccaca
gttcacttcaagctctcgcctgcatacatcctctacgccgcgtgccggtttgctctacag
cgccggtacggtcaagactctcgaccctcagagcacgcagacagcgtaacctcgatcagt
aacaaaatggtctcgatgacagggaaggtcatccagaggcagcagaccattggcggggct
ctcgccttctggatggccaactcctctgagctgctaaacttcctcaagcatgaccaagac
ctcagtccactgacacagcagagccagctggacctgtcccacctggtgcacaaagcctac
agttgtctgctacagtgtctgcagaatgagctgaggaaacatttgccaacctttctgatt
gatcctgagcaatatggttcgctgccagctggtataggtgcagaaatggtgcttaacacc
ttgatgaacaccatgtctctgttacgccgttgtcaggtcaaccctgccctcaccatccag
ctcttctctcagctcttccactacatcagcatctggcttttcaatcagctcatgagccct
gaagccagcaccccaggtctgcgctcccactactggggagccgctctccgtcagaggctc
accaccatcgaagcctgggcagagaggcagggcctggagctggcagctgactgccacctg
ggccacatcatccaggcaaccatcctcctgaccatgaacaagtactcaatgcaggatgcg
aaggacatccagacaacctgtttcaagctgaactcactgcagctgcacatgctgctggct
ggctacctctatgcaaccaatgagccacacatcccccctgatttgatcgatgctgtagtg
acagctgccgaggcctcagcagataacctgattcggagcgaaggacgggacatccagctg
gaggagagcctcgacctccacctgcccttcctgctgccggagggaggatactcctgtgac
actgtgagaggaatccctcaggggtttagagagtttttggagccaatgtgccaaaaaggt
ctctgctctttaacaccccagccaaactccaaaggggactggaccatttatttcagcgaa
tctgccccttctgtagatcacacatatttggcaggacataggcagccagagattatgacg
atcacactgaacaaacctttgaacagtgggatgggggtcagcattgtagctgccaaggga
gctgggcagcgtaacctcgggatctatattaaatccatcgtcaagggaggaccggctgaa
atgaatggccagttaactgctggagatcagctgctcagtgtggatggtcaaagcctggtt
ggtctcagccaagaaagggcagcagcgatcatgatgcaaactggccccattgtgacctta
caggttgcaaaatttgcagcgagttaccacggcctagaagccctgctgagagaatccacc
ccagagaagactacaggggatagagaccatgctaagccaaacaataaagcctgcatcaag
tacagcacagaggaccacagtccctcagagcagctccatggaggcagtcgaaggaagaaa
gagcagataatgcagaggaacagacaactttatcgctccaaccccaacatggccgcagac
ttttgcctggaggatggagataaacttgttgaccctttcacaggaaacagcaccgcttct
gtggccactatgaatctttgctctgataaattccactgggaatacatgacactaccgaac
cctagatcccaggacaggaatgtatctgagcccagtaaaccacagcaaactttccaagtg
tctttgaaacctttacctggacagagctccaatagatctctaaacgtcatgcgccaagcc
ctctctcaggagaacttgtgtacagacagtggaggccccctgctggacaaaagtcagagc
aagtggacacagaaggatcagggtgcaaagcgaactgagaactactgcacgtctttccct
atccgctcttgtctttctactcatgacatcctctctgataacagctcccccacaaatcag
caccaggtcagccgtgtaagctgtgccggtgtctggagaacccctttttcacaacactca
acatccacaccttcaatccagccgatacgcatcgacatccccctaacaagagcggtgagc
caccagtcaaatcctccactcactaccttccagcaaagttcttcatcgctggcagtgaag
atgagccaaactcttcaaatcaatggacacaagcagaatcctcaaagccaagctagtatt
acttatgcatgtccagtatctccaactaagaagctacttcaaccctcactttcgtcacaa
aaattcaacacacacaaagatcaagtagcaaaacctcaagtgagtatcactccaacaaag
catgtttctttccaagaacctccctgtcaacagaaaaagagcaccggtccaatgaaacag
aaagaccctctggagatgtctgatccatggaagagggaagcccaggagaagctggagaag
cagcagaggcttgaagcggtggagttcctgcagcaggagatgcaagagcttcaggctaaa
gctaagcgtacagcggaggagaacaaccgactccgaaagctcaacctggagtggcagttt
cagaagaggctgcaggaaattcagcagagaggagatgacgaggatgaagataaggatttg
gacatgatggtgatgatacagcagctagagaaaagcatgtcacagaccaagaacaacaca
agaagctctggtgggaaggacaaaacggaaaagcaggtgggaactcacctctccaaaaag
gaagatgaagaaaagagagctcagagattaagcggattagctcatgatgttcatcaagca
gcatcaaaagaaaaccaggaggagaaaatgaagagagcgtcggctcctgagaagctaaca
ttcaagcagcgccagcgtcttttttccttggcgtccagttcataa
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integrated database retrieval system
