Oreochromis aureus (blue tilapia): 116318382
Help
Entry
116318382 CDS
T07295
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04120
Ubiquitin mediated proteolysis
oau04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116318382 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116318382 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116318382 (mgrn1b)
Enzymes [BR:
oau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116318382 (mgrn1b)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116318382 (mgrn1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF157-like_N
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
116318382
NCBI-ProteinID:
XP_031593229
Ensembl:
ENSOABG00000004469
LinkDB
All DBs
Position
LG4
Genome browser
AA seq
546 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTLAEDGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKDPSMASETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSGTDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYDDINFSGGLGGDNRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVAESLSPDDEDR
MHSGGDILQDCISEHSSLTKTESDPPGDLSLPGSSESLKSQSTNCSSQPLLCATSSLHME
DEHLIH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagtcgtagaatcgctggtgttgaagacatcgatattcaagccaac
tcggcttaccgatttccaccgaaatctgggaattattttgccagccactttttcatggga
ggagaaaaattcgacacgccacatccagagggatacctttttggggaaaacatggacctg
aattttcttggaaataggccagtgcagtttccatatgtaacacctgcaccccatgagcct
gtgaaaaccctgaggagtctggtgaacatcaggaaggattcgttgcgtttggtcaggtat
aaagatgactctgacacactggcggaggacggcgggaaaccaaaggtccagtatggtgtg
gagttcacttttgatgctgatgctcgagtggctatcaccctctactgccaggcatttgag
gagttctccaatggcatggcagtgtacagcccaaaggatccgtcgatggcctctgaaact
gtgcattacaagcggggggtgagccagcaattctccatgccgtcttttaaaatagatttc
agcgaatggaaagaagaagatctgaattttgaccttgaccgaggagtgtttcccatggtg
atccaagctgtggttgatgaaggggacgattgccttggacatgctcatgtgcttttggca
gcatttgaaagacatgttgatgggagtttctcagtgaaacctctgaagcagaagcaaatt
gtggaccgtgtaagctacctcttgcaggagatttatggaatcgagaacaaaaacaaccaa
gaaactaagccatctgatgatgagaacagtgacaacagcaacgagtgtgtcgtctgtttg
tctgacctgcgagacacgcttatcctgccctgcagacacctttgtctctgcaactcctgt
gcggacactctgcggtaccaggccaacaactgccccatctgcaggctgcccttcagagcc
ttgcttcagatcagagctgtgaggaaaaagcctggagctctttctcctgtgtcctttagt
ccagttctggctcagactatggaccatgatgagcactcaggcacagactcagttcctcct
ggcttcgagcccatctcactgttagaggccctgaatggtttgcgctcggtgtctcctgcc
atcccatcagcccccctctatgatgacatcaacttctcagggggtctgggaggggacaac
agacagttaagctctccagagcatttaagcgatggaagtctgcagaaaggcaaagtcagc
aagtcacctgacagcaccctgaggtctccatcgtctccaatccaggaggaggatgaagag
aagctgtcagagatgtcagatgctcagccacacactcttctgtccagtagccccgccccc
acagatgccacagcgactgaggacgtggcagaatccctgtctccagatgacgaggacagg
atgcattctggaggagacattctgcaggactgcatcagtgaacacagcagcttgaccaaa
acagagagtgacccaccaggtgatctgtctttgccagggtcatcagaaagcctgaaaagt
cagagcacaaactgctccagccaacctctcctgtgtgccacgagcagccttcatatggaa
gatgaacatctcatccactaa
DBGET
integrated database retrieval system
