Oreochromis aureus (blue tilapia): 116318556
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Entry
116318556 CDS
T07295
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116318556 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116318556 (srfb)
Transcription factors [BR:
oau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
116318556 (srfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
116318556
NCBI-ProteinID:
XP_031593444
Ensembl:
ENSOABG00000014005
LinkDB
All DBs
Position
LG13:complement(10890837..10915297)
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AA seq
597 aa
AA seq
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MLPSQVGSAPSGNGSGSGRGTTQHGSGLVGSGIRPVLVRSGQALPGVSESTGAAGRQGDR
DTIGMLGANGPGGPRGARPGNGTGVNPLQTSVQSSMVGLSPGVMLPHGARFDPDRESAPL
CSGSDNDSDSGDDDEPVGSLGDSRRGVKRERGEMEAAVSGQEVGVSPGGYSMVPGGVAGA
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESE
SMGDTKDTLKPTFTVATLPGSASSAQSTVPTTSTTMQVSSGSSFPITNYLAPVSANSNIS
ANGTVLKTASASTGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQALAV
TPQPQQGQQAVFRFPAAVSLTGPGVPQQLQAIQVHPNAQPTSNSDSSPEISHTSTNSTAT
VSLPATIVTSSVPTSVAGHMMYPSPHTVMYASTPALADGGLAVLNAFSQGTSAMQVSHAQ
AQDTGGVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNSTELKE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggttggatcggcaccatctggaaacggctcgggttcaggcaggggt
acaacacaacacggctcggggttggtcggcagcgggattcgtcccgttcttgtcagatca
gggcaagctctaccgggggtcagcgagagtaccggtgctgcagggcgacagggggacaga
gataccattgggatgctgggagctaatggtccagggggtccgagaggtgcaaggccgggg
aacgggaccggtgtaaaccctcttcagacttccgttcaaagcagcatggtgggcttaagt
ccaggagtcatgttgcctcacggagcccgcttcgatccggaccgggagagtgcgcctctg
tgcagcggctcagataacgactcggactccggagatgatgacgaacccgtgggttcactt
ggggacagcaggagaggggtgaagcgggagagaggggagatggaggctgcggtgtcggga
caggaggtaggagtatcgcccggaggttacagcatggtgcccggaggggtcgccggggca
aaaccgggcaagaagacacgtggacgcgtaaagataaagatggaatttattgacaacaag
ctgagacggtacaccacattcagcaagaggaagacgggcataatgaagaaggcctatgaa
ctctccaccctgacgggaacccaggttctgctactcgtggccagcgaaacgggtcacgtg
tacacttttgctactcgcaaactccagcccatgatcaccagtgaaacgggcaaagccttg
atccagacatgcctcaactcgccagactctccgccgcgctccgacccgtccacagatcag
cgcatgagcgccaccgggtttgaggagactgacctcacctaccaggtgtcggagtcggag
agcatgggcgacacaaaggacaccctgaagccgacattcacagtagcgaccctgccaggc
tcggccagcagcgcccagtccacagtacccaccacctccaccaccatgcaggtgagcagc
ggatcttcgtttcccatcaccaactacctggcccccgtctcggccaacagcaacatcagt
gccaacgggactgtcctcaagactgccagcgcctccacgggggtcatgcagctgcccggc
ggcttcacgttcatgcccgcaggcactcctctccctcctggtacccccaccattcctctg
agtcagttgcaacagcactccttggccctccaggggcagcatggtcaggccctggccgtc
accccacagccacagcagggacagcaggctgtcttccgcttccctgctgctgtctccctc
acaggtccaggggtaccccagcagctccaagctatccaggtccatcctaacgcccagccc
acctccaacagtgacagcagccctgagatctcccatacctctacaaactccaccgccacg
gtaagtctcccagcaaccattgtcacttcgtcagtgccaacgtctgtggcaggtcacatg
atgtaccccagcccgcacacagtgatgtacgcctccacgcccgcgctggcagacggtggg
ctggctgtgctcaacgccttctcccaggggacctcggcaatgcaggtgtcccacgcacaa
gcccaagacacaggtggtgtccctcaggtgttcctcacagcacctccaggcacggtgcag
atccctgtctcagcagtgcagctacacccaatggtgattggccagcagtcgagcggcagc
agcagtaacctgacggagctccaggtggtgaacagcacagaactcaaagagtga
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