Oreochromis aureus (blue tilapia): 116318601
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Entry
116318601 CDS
T07295
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116318601 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oau04812
]
116318601 (spast)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
116318601 (spast)
Membrane trafficking [BR:
oau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116318601 (spast)
Cytoskeleton proteins [BR:
oau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
116318601 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
AAA_lid_3
RuvB_N
AAA_22
AAA_5
TIP49
MIT
AAA_14
AAA_16
Mg_chelatase
DUF815
IstB_IS21
AAA_24
nSTAND3
NPHP3_N
AAA_2
AAA_33
DUF5906
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
116318601
NCBI-ProteinID:
XP_031593526
Ensembl:
ENSOABG00000019533
LinkDB
All DBs
Position
LG13:complement(12097546..12104541)
Genome browser
AA seq
477 aa
AA seq
DB search
MSTKTNASKPKDSAEVIKNIHKQAFEYISKALKIDEDDTGEKKEAVQWYKKGISELERGI
AIELTGQAGEQYDRAKRLQDKMVTNLTMAKDRLTLLETTLASKRRNDPQGTSRHALPQPK
SVPKSQPAGVSTTIRPSTPVRPSSRLTDAKTTARVGKTQNGRPAAVKQPPKRDMKNFKNV
DSKLANLIMNDIVDSGATVSFDDIAGQDLAKQALQEIVILPALRPELFTGLRAPARGLLL
FGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSVIFI
DEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGRDDRVLVMGATNRPQELDEAILRRF
AKRVYVTLPDEKTRFTLLKNLLGKHGSPLSQNELSCLAKVTAGYSGSDLTALARDAALGP
IRELGPDQVRNMAATEVRNIKKKDFEDSLKRIKPTVSPATLDMYTKWNKDFGDTSAV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccaaaacaaacgcaagtaagcccaaagacagcgctgaagttataaaaaacatc
cacaagcaggcgtttgagtatatatccaaggcactgaagattgacgaggacgacacagga
gagaagaaggaggctgtgcagtggtacaagaaagggatttctgagcttgaaaggggtatt
gcaatagagctcactgggcaagcaggagagcagtatgaccgagcaaagagacttcaggat
aaaatggtcaccaacctcaccatggcaaaagacaggcttacccttttagagacgacactg
gcctctaaaaggagaaatgacccccaagggacatcacgtcatgctcttccacagccaaag
tcagttcctaaaagtcaacccgcaggtgtttccaccaccatcagaccctccactcctgta
agaccttcatcaagactaactgatgcaaagacaaccgctcgggtgggaaaaactcagaat
ggaagaccagcagctgtgaaacagcccccgaagagggatatgaaaaacttcaagaatgtg
gacagcaagctggccaacttaattatgaatgacattgtagacagtggagcgactgtgtca
tttgatgacatcgcagggcaggatctggcaaagcaagcacttcaagaaattgtcatcctt
cctgccttaagacctgagctctttactggtctgagagctcctgcacgtggcttgctttta
tttggcccaccaggaaatgggaagaccatgctcgccaaagcagttgctgcagagtctaat
gcaacattcttcaacatcagtgctgctagtttgacctccaaatacgtgggagaaggcgag
aagcttgtacgagcactgtttgcagttgcaagagagttgcagccctcagtcatcttcatc
gatgaagtggacagcttgctctgtgaaaggagggagggggagcacgacgcctctcgccgt
ttaaaaactgagttcctcattgagtttgacggggtgcagtcaggaagggatgacagggta
cttgtaatgggagcaactaacaggccccaggagctcgatgaagcaatattaaggcgcttt
gcaaaaagggtgtatgtgaccttacccgatgagaagacaagatttacgctgctgaaaaac
cttttgggaaagcacgggagtccactgagccaaaacgaactgtcctgtcttgcaaaagtg
actgcaggatattcagggagcgatttgacagcattagccagagatgctgcacttggccca
ataagagagttgggaccagaccaagtccgtaatatggctgctactgaggtgcgcaacatt
aagaagaaagactttgaggattctctgaagcgaatcaaaccaactgttagtccagcaact
cttgatatgtacaccaaatggaacaaagattttggtgatacatcagcagtttaa
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