Oreochromis aureus (blue tilapia): 116318739
Help
Entry
116318739 CDS
T07295
Symbol
smg9
Name
(RefSeq) protein SMG9 isoform X1
KO
K18735
protein SMG9
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116318739 (smg9)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
116318739 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_30
AAA_18
AAA_22
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
116318739
NCBI-ProteinID:
XP_039475637
Ensembl:
ENSOABG00000024435
LinkDB
All DBs
Position
LG11:16097855..16109048
Genome browser
AA seq
507 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRGDRDVGPPGQNLSGPSRDRDYQPRERRDGSEDPPGPLI
QKTPIILAKPPGERAKPSQNAPVSGAPVLEKPIMLMKARDDGGKPGTPTESAAQSSGPPS
KIEREGQRPTQPVYQIQNRGMSASASSGALDPMVGQSKLLPPEKMKHSIKLVDDQMNWCD
SAMEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANTPEEDQRSFVFRPQTQEIKERGGNQ
STGIDFFITQERVIFLDTQPMLSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFLF
TVCHVVIVVQDWFTDLNLYRFLQTAEMLKPSTPSASHDSTGSSGSDDGAEYYPHIVFLQN
KARRDDFCPRNLKNMHMVVDKLMAHSHLKYKGTLSMLDCNIFPGLGQDYLTTEVNMFLLP
VQENDGEDNLTKAGSGTYPLFSLLPGYRGHPAFSTMVSKLRSQILAMPRCQLSHTILTEK
NWFHYAARIWDGVKKSSALSEYSRLLC
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtccggtcacagtcaacccggcatgtatgggcaaggccgcaggaggaggcga
cgccgaggggacagagatgttggccctccgggacaaaacctgtccggacccagtcgagat
cgggattaccaaccgagggagcgaagggatggaagcgaggatccaccaggtcctctcatt
cagaagacccccatcattcttgcaaaacctcccggggaaagggctaagccctcacagaat
gcacctgtcagtggagcaccagtcctggagaagcccatcatgctaatgaaggccagggac
gatggagggaagccagggacacctactgagtcggctgctcagtcctctggtccaccctct
aagatagagagggaagggcagcgacctacccagcctgtataccagatccaaaacagagga
atgagtgcttctgcatcgagcggtgcattggaccccatggtcgggcagtccaaactcctt
cctccagagaaaatgaagcacagcattaaactggtggatgatcagatgaattggtgtgac
agtgccatggagtatttgagggaccagacagacatgttggtggtgggagttattggcttg
cagggaactgggaaatccaccatcatgtcgctgttatctgccaacactcctgaggaagat
caaaggagttttgtattcagaccacagactcaagaaatcaaggaaagaggcggaaatcag
agcacagggattgatttcttcatcacacaggagagagttatcttcttggatacgcagcca
atgctaagcccatcaattctggatcatcttatcaacaatgatcggaagttacctccagaa
tacaatcttcctcatacatatgttgagatgcagtctcttcagatcgctgccttcctgttt
acagtgtgccatgttgtaattgtggttcaagactggttcactgatttgaacctttacagg
tttcttcagactgctgagatgctgaaaccttccacaccgtctgcaagccacgacagcact
ggctcttcaggcagtgatgatggagcagagtattatccacatatagttttcctccagaac
aaagccagacgggatgatttctgcccaagaaatctgaagaacatgcatatggtggtcgac
aaattaatggctcattctcacctcaaatacaaaggaacattatccatgctcgactgcaat
atcttcccaggcctggggcaggactatctgacaaccgaggtcaatatgttcttgcttcct
gtgcaggaaaacgacggggaggataatttgaccaaagcagggtcaggaacatacccactg
ttctctctgctccccggctacagaggacacccggccttctccaccatggtttcaaagctc
cgcagccaaatactggccatgccccgctgtcagctgtcacacactattctcactgagaaa
aactggtttcactatgcagctcgtatctgggatggtgtgaaaaagtcctcggccctctct
gaatacagtcgtctgctctgctga
DBGET
integrated database retrieval system