Oreochromis aureus (blue tilapia): 116318782
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Entry
116318782 CDS
T07295
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116318782 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oau04990
]
116318782 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
oau04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116318782 (pdlim1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116318782
NCBI-ProteinID:
XP_031593780
Ensembl:
ENSOABG00000024613
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All DBs
Position
LG13:9893027..9898870
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AA seq
320 aa
AA seq
DB search
MPLRVALQGPGPWGFRLVGGKDFEQPLAISRVNPGSKAAQANLCIGDIILAIDGEPTENM
THLEAQNKIKGCIEEMVLSIDRSETKLWSPLSSEEGKAHPYKMNLASEPREVKHIGSTHN
RSALPFTGFGSKVVTNQYNNPSGLYSSENIKDFNSAVDEVKTITTANDPPNNAPSEPSGK
RPPIVADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDADKPSGFRSVKAPTTKVGA
SVGNTEKLPMCDKCGSGIVGMVVKLRDKFRHPECYTCTDCNVNLKQKGHFFVENQIYCET
HARERVTPPEGYDVVTVFPK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgtgtggcgttgcagggtcccggcccctgggggttcaggctggtcggggga
aaggacttcgagcagccactggctatttcccgggtcaaccccgggagtaaagcagcccaa
gcaaatctatgcatcggggatataattcttgccatcgatggagaaccaacagagaacatg
actcacttggaggcgcagaacaagataaagggctgcatagaggaaatggtgctctccata
gacaggtcagaaacaaaactgtggtcaccgctgtcatctgaagaggggaaggcgcatccc
tacaagatgaatcttgcatcagaaccacgggaggtgaaacacataggctcgacccacaac
aggagcgccctgcctttcaccggtttcggctccaaagtggtgaccaaccagtacaataat
ccatctgggctgtactcttcagagaacatcaaggacttcaactcagctgtggatgaagtc
aagaccattactacggctaatgacccccccaacaatgctccatcagagccgtcaggtaag
cggccgcccatagtcgccgattccgaagtctacaagatgctgcaggagaatcaagagtct
gatgagcctcctcgacagtctgcttcattcaaggtgcttcaggagattcttgagacaggc
gatgctgataaaccatcaggcttcaggagtgtgaaagcacccacaacaaaggttggagca
tcagtggggaacacagagaagttacccatgtgtgacaaatgtggatctgggattgtaggg
atggttgtgaagctgagggacaagttccgtcaccctgagtgctacacctgcacagactgc
aacgtcaacctaaaacagaagggacatttctttgtggagaaccagatttactgtgagacg
cacgcacgcgagcgagtgactccacccgagggctacgacgtggtcacagtctttcccaag
tag
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