Oreochromis aureus (blue tilapia): 116318942
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Entry
116318942 CDS
T07295
Symbol
prdm1b
Name
(RefSeq) PR domain zinc finger protein 1 isoform X2
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116318942 (prdm1b)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116318942 (prdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2HE
B129_C2H2-zf
Zap1_zf1
zf-CCCH_6
Motif
Other DBs
NCBI-GeneID:
116318942
NCBI-ProteinID:
XP_031593991
Ensembl:
ENSOABG00000012484
UniProt:
A0A668TK82
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Position
LG22:complement(26064195..26090007)
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AA seq
621 aa
AA seq
DB search
MAEIYSGGQLQHFIDGYDVHRSNWMRYVNPARSLAEQNLVACQNGRDIYFYTIRPVEPKQ
ELLVWYSPEFAQRLCGQQDDIKQKYTSNNEDQEHEYVKQHLPQQTWLKERAKEGVKDGKD
GDTEEKIDVEMLERDTPPDTPDDQIIDFSKKDEKDDKDPEGRGIIPSPQLEHREPSLGLN
HPYLPDHYSTFPAPHRNFPLHLHGLYGHREGLVSSYPPLQSRPLQPSYQFLPPYNPHYPR
LLLPPYSPPFHGMLSSRGSLQYSSYLGADGLPYPPISAPNLLPVSLSYSPSPQGGLKELT
PNISPPRGAPATPELSPPAKPNSHHQSPEQSPSGCEEAMNLSLATTKSSTAPRNGPGHKS
LPYPLKKQNGKIKYECNICSKTFGQLSNLKVHLRVHSGERPFQCNLCKKSFTQLAHLQKH
HLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCNTKFTQYIHLKLHRRLH
SSRDRPYRCQLCAQAFFHHFSLCIHQRSTCPANSSTPANVHMKEMVERFDASQEADALTE
TASASQVGEAVEHWLARTLEGEGKEDQKEATMLLKALTAAINAPLTPMTQSAPHHNPPLA
YQERASVVHLHKRSSVKTEGQ
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatttatagcggtgggcagctccaacacttcattgatggctacgatgtccac
aggagcaattggatgcgctatgtcaaccctgcccgctctcttgccgaacagaacctggtg
gcatgccagaacggacgggacatttacttctacaccatccgtcctgtggagcccaaacag
gagctgctggtctggtacagtccggagttcgcccagaggctctgcggccagcaagacgat
atcaaacagaaatacacgagtaacaatgaagaccaagagcacgagtatgtgaaacagcac
ttacctcagcagacgtggctcaaagaaagagcaaaggaaggggtaaaagacgggaaggac
ggtgacacagaagaaaagattgacgtggagatgttggagagagacactccacctgacaca
cctgatgaccagataattgacttcagcaaaaaagatgagaaggacgataaggatccagaa
ggaaggggcatcattccttcccctcagctggagcacagagagcccagtctgggcttaaat
catccttacttgccagatcactactctacattcccagctccacataggaattttcctctt
cacctccacgggctctatgggcacagggagggcctggtgtcatcttaccccccattacag
tccagacctctccagccctcttatcaattccttcctccctacaacccacattatcctcgc
ctcctgctccccccatactctcctccctttcatgggatgctgtcatcgagaggatcgctc
caatacagcagctacctcggcgctgacggactcccgtatccccctatcagcgcacctaat
cttcttccagtgtctctctcctactccccatctccacaaggaggtctgaaagagctaaca
ccaaatatttccccgccgagaggagccccagccactccagagctctcccctcccgccaag
cccaacagccaccatcagtcccctgagcagtctccctctggctgtgaggaggctatgaac
ctaagcctggctacaaccaaaagcagcactgcaccacgcaatgggcctggtcacaaatcc
ctgccctatccactaaagaagcagaatggaaagatcaagtatgaatgtaatatctgctca
aagaccttcggacagctgtcaaacctcaaggttcacctccgagtgcacagtggcgagaga
ccattccagtgtaacctatgtaaaaagagcttcactcagcttgcccacctacagaaacat
cacctggtccacacgggagagaaaccacatgaatgtcaggtgtgccacaagcgcttcagc
agcaccagcaacttgaaaacacatctacgactacactctggggaaaagccttaccagtgc
aagctgtgcaacaccaagttcacgcagtacatccacctcaaactgcaccgccgtctccac
agcagccgcgaccgtccctaccgctgccagctctgcgcccaggcctttttccaccatttc
tctctctgcatccaccagcgcagcacctgcccagctaactccagcacgcctgccaatgtg
cacatgaaagagatggtggagcggtttgatgccagccaagaggcagacgcgctcacagaa
acagcatcagcgtctcaggttggggaagccgtcgagcactggctggctcgtaccttagaa
ggtgaaggaaaagaagaccagaaggaggccaccatgctgctaaaagctctgactgcggct
attaatgcaccactgacacccatgacccaatcggcaccacaccataatcctcctctcgcc
taccaggagagggccagcgtcgttcatctccacaaacggtcatctgtgaaaacagaagga
cagtga
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