Oreochromis aureus (blue tilapia): 116319006
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Entry
116319006 CDS
T07295
Symbol
mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116319006 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116319006 (mbd6)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
116319006 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
PrpF
Motif
Other DBs
NCBI-GeneID:
116319006
NCBI-ProteinID:
XP_031594072
Ensembl:
ENSOABG00000015178
LinkDB
All DBs
Position
LG20:complement(24628724..24645724)
Genome browser
AA seq
1684 aa
AA seq
DB search
MMGGSDTVSGDKDGVHTTAIHVPIGWQRRVEGGQVLYVSPSGTTLSNLEEVKTYLMTDGT
CKCGLECPLIINKVFNFTVGVKVEQHSQPLGKAEQDMTKLCNHRRKVVAMAALCRSMQAS
QLPFANFHHPGNQEMSNRVDSRDTKGESTEREEEDRGIFCPKLHPVPARPQNNLHPNPCT
SPKSSHHFIYPYNGSSSVLHPATNSHYPLDVFRRLHHPAFSASSSSSSSSFPAYSTPQRS
PRTPTPQSNSQGQRTPKTPETPVSPRLGPLSSPPPSSPVTLGGGGRGTQTHPHHPHVVIV
GGSTPPSLSPSVHNMSMSPHQRSCHPSASPSSLSEQGGGLPAAEGGTLMGNNLPQRRKST
SSSPHSPLPSGSPNPSPQLPKYKLEDILEQFKNSGNSSTNNHHLLNPNNPSLLTNQSSSN
PHGLSSKPSKTPTSTAGSQVFGLNSAGPSSLPLGPYLNHHHSHQGKLPHPASFPASSLLS
AAAKAQLANQITQGQSSNVASNAVTLASSLEVLKEAQQQQASKVTNSTLHNSHSPSSIAS
SRLPHPSLAAASTVFFPPSHSLVQSLASSSSHLPQSAERNTSYRKRQRRSPTVLSMLTDT
KQLCNGLRKTPPEDAVSATVINLSSSSTSFPSSSSHSSSTSAVQNQNAIMSDNHHQLLSG
QMPRFPAPRQTAQLSRPLRPNEALDFTTGPTPTATPLGLDPPTQPLSALLHLLSLQNVQA
TVSASSSALAQSGSVSVEGGGHTNKQSPKQSPSSPTHQSNVRDSPTRSPCRTDNTNSPSL
SPQPLSPPPPSSQFTSAQSHLYPQSTKSTPLQKDSSCTVLPNSDFHNSSSPSQQTPPSSF
GKHQQTDNHIPSVDPASQSSLQVASPQGTVTREIVSKNEPTSVDLSHPQGSVPVGVSTSP
KPLDLSNHVLAILAASSNVPQGEGNSSSHTSDVEMSSPGNQTAGTEESEFGDPKISTLTK
PPATSPGLTSSSRQGENHSPPNPSAVGDSATPLSLAEAFPFMNQEQLLQLLSSTGGVPSV
LDPTVLASLPLGGLWLGGQHAQVPPASVAPQPPHNLSDQQSEQQQQQLLITQQEDAQQQN
QDQQQKQLQINNNHLFPLLPLLSGAQGEFPLNLLGLLNPLPAPASAPSAGQEADLTEKPN
LHALLMASLLQQQASLLPLSALGQLSQVSLEVPIQQSQQISTTLEGLSLDKTSGLLDPST
LTGPGLLEVTQGLLPIPAGAEGSIQALQSLLIPATLPPPSAAFLPLSPALLTAALSSAEL
HPPPNTQLAPAQQTQHTQPQVPTDAGVDTLIPVSLQSKDNPILQQLLPTLLNPAILGDLP
GLTGLHNIVGIGAGSILLPPVQASALGMPLLQGHDGAINLLNNIQLNLAPASEGEKPVSL
QDAQSPAPQEDMPASQITPEVIPSPVPALAPAAAQESTPASQRGSEGRSVIDPYTSFMDT
IYTSFLQVSAKEQEDGAHLGPSDPTSPFCALPPVSFPVEHHTPSTTVPTLPQASAPVSLS
PRRACSLRNPDLSRLSLEAAAHSPAQGTPKPTEDGSVSPLQRKPVMVEGHTHPEPPLPPI
YLEEAKTDCAGPAASMCPYVDPGVDRQGHLPQVGYLSPGDECNSRPTEETTGTLLHSEQG
MDQAGAAGGARRGRKRKQTLQNVLEDFRDVDATALEETKATTALLKPERSVRGRRRRGAR
SQRQ
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgatactgtcagtggggacaaggatggggtccacaccactgcaata
cacgtccccatcggctggcagaggagagtggaaggagggcaggtactctatgtcagtccc
agtggcactaccctgtccaatctggaagaggtcaagacctatctgatgactgatggcacc
tgcaaatgtggcctcgagtgtcctctcatcatcaacaaggttttcaatttcacagtgggt
gtgaaggtggaacagcacagccagccactgggcaaagcagagcaggacatgaccaaactc
tgtaatcatcgcaggaaagtggtggcaatggctgccctgtgtcgcagtatgcaggcttca
cagctgccctttgccaactttcatcatccaggtaaccaagagatgagcaatcgggtggac
agtcgtgatacaaagggcgaatccacagagcgtgaagaagaggaccgtggcattttctgt
cccaaactccatccagtcccagctcgaccccagaacaaccttcacccaaatccctgcacc
agtcctaaatcctctcaccattttatttatccttacaatggctcctcctctgtccttcac
ccagccacaaactctcactatccactagatgtctttagaagacttcaccatcctgctttc
tcagcatcttccagctcttcctccagctcatttccagcgtacagcaccccccagaggtca
ccccgtactcccactcctcaaagcaacagtcaaggtcaaagaacacctaaaaccccagag
actcctgtttctcctcggctaggacccctctcttcacctcccccctcgtcccctgttacc
cttggtggaggaggaagaggaacacagactcatcctcatcatcctcatgttgtaattgtg
ggaggttctaccccaccctccctctctccctctgtccataacatgtctatgtctccacac
cagcgctcctgccacccatcagcttctccatcctctctgtctgagcagggaggaggctta
ccagcagcagaaggaggaacgctgatgggaaataacttgcctcagaggaggaaatctacc
tcttcctctccacactccccacttcccagtggctccccaaaccccagcccccagctcccc
aaatacaagctggaagacatcctggagcagtttaagaactcaggcaatagcagcactaat
aatcaccacctcctaaaccctaataatccctccttactgaccaaccaaagcagtagtaac
cctcatggtctttcctcaaagccctcaaagactccaacctccactgcaggatcacaagtt
tttgggttgaactctgcagggccctctagtttacctctggggccatatctgaaccaccac
catagccatcagggcaagctgccacatccagcttctttccctgcaagtagcctcctctct
gcagctgccaaggctcagctggctaaccagataacccagggccagagctcaaatgtggcc
agcaacgcagtgaccttggcctcttctctggaggtcctgaaagaggcacaacagcaacag
gcatcaaaggtaacaaacagcactttacataacagccactctccctcctccattgcttct
tctaggcttccccatccctcccttgcagcagcctccactgttttctttcctccatcacac
tctctggtccagtccctggcttcctcctcatcccatctgccacaatcagcagagcgtaac
acatcgtataggaagcggcaacgtcgatctcccacagtcctcagcatgctaacagacacc
aagcagctctgtaatgggctgcggaagaccccaccagaagatgctgtttctgctacagtt
atcaatctttcctcctcgtccacttcattcccctcctcctcctcgcattcctcctctacc
tcagctgtgcagaatcagaatgccatcatgtcagataaccatcatcaactcctctctggg
cagatgcccaggttccctgctcctcgacagacggcacagctttccaggcctctgcgccca
aatgaggccctggacttcactacaggaccgacacccacagccacccctcttggcttggat
cctccaacccagcctttgtctgccctgttacacctgctcagtttgcagaatgtgcaggcc
acagtctcagcatccagctctgccttagctcagtctggatctgtgtctgttgaaggaggt
ggacacactaataaacagagccccaagcagtcaccttcatctccaacccatcagtctaat
gtcagggactcgccgactcggtcaccttgccgaacagataacactaattctccctcattg
agtccacagccactttctcctcctcccccctcctctcagttcacatcagcgcagtctcat
ctttatcctcagtccactaagtcaactcctcttcaaaaagattcttcgtgcacagtgtta
ccaaactcagatttccacaacagcagcagcccatctcagcagacacccccatcttccttt
ggcaagcatcaacaaaccgataatcacattccttcagtagatcctgcttcccagtcatct
ttacaggttgcctcacctcagggcactgtcacaagagagattgttagtaagaacgaacct
acgtcagtggaccttagtcatcctcaaggcagtgttcctgtaggggtatccacttcccca
aagcctctagatcttagcaaccacgtcctggccattctcgcagcatcttctaatgttccc
caaggggagggcaactcttccagccatacctctgatgttgagatgtcttccccaggaaat
caaactgcaggaacggaggagtctgaatttggggacccaaagatctccacattgaccaaa
cctccagccaccagtcccgggctcactagctcctctcgtcaaggagagaatcacagtcct
cctaacccttcagctgtaggtgactcagccactcctttaagtctggcagaggcctttccc
ttcatgaaccaagagcagctgctccagctgctgtcgtctacaggaggagtaccatctgtc
ctggaccccacagtcctggcttcattgcccctagggggcctttggttgggaggacaacat
gcacaagtacctcctgccagtgttgcaccgcagccaccacataatctgtcagaccagcag
tcagagcagcaacagcagcagttactgataacacagcaagaagatgcacagcagcaaaac
caagaccaacaacaaaagcaactgcagattaacaacaatcatctgtttcccttgttaccc
ctgttgagtggtgcccaaggggagttccctctgaaccttttagggctgctgaatccactt
ccagccccagcgtcggccccttctgcagggcaggaggctgatttgacagaaaaacccaac
cttcacgctctgctaatggcctccttgttgcaacagcaggcttccttgttacctctatct
gcgctgggtcagttgagccaggtcagcttggaagttcctatccagcagtcacagcagatc
tctactacattggagggcctcagtctggataagacctctggcctgctggacccatcaacc
ctaactgggccagggctcttggaggtcactcagggcctccttcctattcctgcaggagct
gaaggctctatccaagcccttcagtctctactcattcccgccactcttcctcctccctct
gcagccttcctgcccctcagccctgccttgctcactgctgccctgagctctgctgagctc
cacccgcctcccaatacccaattagctcctgcacagcaaacccaacatacccaacctcag
gtacccacagatgctggtgttgacacgctcatacccgtatctcttcaaagcaaggacaac
cccatcctccaacagttactccccactttgctgaaccctgctatattaggagatcttcct
ggcctcacaggcctccataacattgtggggattggagcaggttccattctcctaccacca
gtccaggcctctgctttggggatgccactgctacagggccatgatggagcaatcaactta
ctcaacaacatacagctgaaccttgctccagcctcagaaggagagaagccagtatccttg
caggacgctcaaagccctgccccacaggaagacatgccagccagtcaaatcactcctgaa
gtgatcccaagtcctgttccagctctagctccagctgctgcccaagaatccactccagcc
tctcagcgaggatctgagggcagatctgtcattgatccttatacttctttcatggacacg
atttatacctcttttcttcaagtcagtgctaaagagcaggaagatggggcccatttgggg
ccatctgaccccacttcacccttctgtgccttacctccagtttcttttcctgtggagcac
catacaccgtccacaactgtcccaactctgccacaagcaagtgccccagtttcccttagc
ccacggcgggcttgttccctacgcaacccagacttatcccgacttagtctggaagcagca
gcccattctccagcccaagggacacccaaacccactgaagatgggtctgtgtccccctta
caaaggaaaccagttatggtagagggacatactcacccagaacctcctcttccacctata
tacttggaggaggccaagacagactgtgctgggcctgctgcatctatgtgcccttatgta
gatccaggtgtggataggcaggggcatcttccccaagtagggtatctcagtcctggggat
gaatgcaatagtaggcccactgaagagacaactgggacattgctgcactctgaacaggga
atggaccaagcaggagcagcgggtggagccagaagaggaaggaaaaggaaacaaacgctt
cagaatgtgttagaagacttcagagacgtggatgctacagcactagaggaaaccaaggct
acaacagcactgctgaagcctgagaggtcagtgcgcggcaggcggcgacgaggcgccagg
tctcaaaggcagtga
DBGET
integrated database retrieval system
