KEGG   Oreochromis aureus (blue tilapia): 116319097
Entry
116319097         CDS       T07295                                 
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03082  ATP-dependent chromatin remodeling
oau03083  Polycomb repressive complex
oau04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116319097 (rbb4l)
   03083 Polycomb repressive complex
    116319097 (rbb4l)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    116319097 (rbb4l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oau03036]
    116319097 (rbb4l)
Chromosome and associated proteins [BR:oau03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     116319097 (rbb4l)
  Histone modification proteins
   HAT complexes
    HATB complex
     116319097 (rbb4l)
   HDAC complexes
    Sin3A-HDAC complex
     116319097 (rbb4l)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     116319097 (rbb4l)
    PRC2.2
     116319097 (rbb4l)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     116319097 (rbb4l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116319097 (rbb4l)
  Chromatin remodeling factors
   NuRD complex
    116319097 (rbb4l)
   NuRF complex
    116319097 (rbb4l)
   NuRF complex (fruit fly)
    116319097 (rbb4l)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st ANAPC4_WD40 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st MIOS_WD40 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 116319097
NCBI-ProteinID: XP_031594179
Ensembl: ENSOABG00000020099
LinkDB
Position
LG1:40675196..40683225
AA seq 427 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGGGPKEGKILDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggccgataaagaggtgtacgacgatgcggtggaggagcgggtcatcaacgaggagtac
aagatctggaagaagaacacgcccttcctgtacgacctggtgatgacgcacgcgctggag
tggcccagcctgacagtgcagtggctcccagatgtcagcaggccggaggggaaggactac
gccgtccacaggctggttttagggacgcacacatcagacgagcagaaccacctcgttatc
gcgagtgtccaggttccaaacgacgatgcccagtttgacgcgtcgcactacgacagtgag
aaaggagcagagttcggcggcttcggttccgttagcgggaagatcgagatcgagataaag
atcaaccacgaaggcgaagtgaaccgagcgcgctacatgccccagaacccctgcatcatt
gccaccaagactcccacctccgacgtgctggtcttcgactacactaaacacccgtctaag
ccagatcccagcggggagtgtaatcccgacctaagactgaaaggtcaccagaaagaagga
tatggcctttcctggaatccaaacctaagcggcaacctgctcagcgcctccgacgaccac
accatctgcctgtgggacatcgggggcggtccaaaagaagggaagatcttggacgcaaag
accatcttcacgggccacacggcggtcgtggaggacgtctcctggcatctcctccacgag
tcacttttcggctccgtcgccgacgaccagaagctgatgatatgggacacacgctctaac
aacacatccaaagcgagtcactcagtggacgctcacaccgccgaggtcaactgtctgagc
ttcaatccctacagcgagttcatcctggccaccggctctgccgataagactgttgcatta
tgggatctgaggaacctcaaactgaagcttcactcctttgagtcacacaaagatgaaatt
ttccaggtacaatggtctcctcacaacgagacgatcctggcgtccagtggcaccgaccgg
cgtctcaatgtctgggatctcagcaaaattggggaggaacagtctgcagaggacgctgaa
gacggcccgccggagctcctgttcatccacggcggccacacggcaaagatctcagacttc
tcctggaaccccaacgagccgtggatcatctgctcagtgtccgaggacaacatcatgcaa
gtgtggcagatggcggagaatatctacaatgacgaggagcccgacaacacacctgcatca
gagctggaggctcagggatcgtaa

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