Oreochromis aureus (blue tilapia): 116319111
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Entry
116319111 CDS
T07295
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116319111 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oau03009
]
116319111 (efl1)
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
Pre-60S particles
GTPases
116319111 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
ARM_LRRK2
EFG_IV
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
116319111
NCBI-ProteinID:
XP_031594196
Ensembl:
ENSOABG00000020013
LinkDB
All DBs
Position
LG1:complement(40192090..40274527)
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AA seq
1122 aa
AA seq
DB search
MGHTSLEKIISLQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYSHGDQEYLLNLIDSPGHVDFSSEVSTAVRLCDGAVVVVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLVVELKLTSQEAYTHLKKILEQVNAVTGTL
FTSKVLEERAEKEEEEKKEKEGEKSSGDQVYDWSAGLEEVDDSHLYFSPDQGNVVFASAI
DGWGFSIRQFAHIYSERMGIKKEVLLKTLWGDFYLNMKAKRIMKGAQAKGKKPLFVQLVL
DNIWSLYDAVVIRRDKEKVEKVVTSLGVKLMARDLRHSDPKVLLSAICSQWLPVSQAVLS
MVCEKLPSPLEMAAERVEKLMSVGARRFDSLPEQTQHLKTAFLQCSSEENAPVIVFVSKM
FAVDAKALPQHRQRPLTQEEIAERREQARQRHADRMAAESHREPPHSESVSPAGLCTANM
ENLTLKDSKPEEEEEPKETFVAFARVYSGVVRRGQRVFVLGPKYDPAQGLSTLPEGCSAS
DDVSEIPHLSCCSMENLYLLMGRELEELQEVPAGNVLGIGGLEEYVLKSATLSTAPACPP
FTPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTAGEVH
LQRCLDDLRDRFAKIEISASEPIIPFRETVVRPPKVDMVNEELGKQQKVAIIHQVKEEAS
QGRSSDTLHLDSSGLVTLTTPNRLATVGIRAIPLPQEVTRLLESSSEVIRTLEQVNMSLR
EGKSLDISVRTLEAISDLKAQLESLLQGRKWRNAVEHIWAFGPRRYGPNILLNSVEGYQR
PSVWQCLSRGDKASEATALRDFDNSIISGFQLAALSGPMCEEPLMGVCFSVERWDVQSTA
PPQHQDSVEDDSTGHEATAESNMEGSSETSARGEGTAAGPSHAGRRPEVAASSDCYGPVS
GQLIAAVKEACRHAFQAQPQRLMAAMYTCEIMATADVLGRVYGVLGKREGRVLHEEMKEG
TDMFIIKAVVPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDPYWVPTTEEEYLHFG
EKADSENQALKYMNDVRRRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagcctggagaagatcatctccctgcagagaaacccagccaacatcagg
aacctgtgcatcctggctcacgttgaccacggtaaaactactttggcggactgcttagtg
gcgagtaatggcatcatatcgagtcgactggcggggaagctgaggtatctggacagccgg
gaggatgaacagatccgaggaatcaccatgaagtccagcgccatctccctgcactactca
cacggcgatcaggagtacttactgaatctgatcgactctccgggtcacgtcgacttctcc
tcagaagtttccaccgctgtccggctgtgcgacggagctgttgtagttgtcgatgctgtg
gagggagtgtgtccgcagacccaggttgtgctgcgtcaggcgtggctggagaacatccgg
ccggttctggtcattaataagattgatcggctcgttgtggagctgaagctcacgtctcag
gaagcttacactcacctgaagaagatcctggaacaggtgaacgccgtgacgggaactttg
ttcacatctaaagttctggaggagcgagcggagaaggaggaggaggagaagaaggagaaa
gagggcgagaagtcaagcggagaccaggtttacgactggagcgccgggctcgaagaggtc
gacgactcccacctctacttttctcccgatcagggaaatgtggtgtttgccagcgccatc
gacggctggggcttcagcatccggcagtttgctcacatctacagcgagaggatgggcatc
aagaaggaggtgctactgaaaaccctgtggggagatttctacctcaacatgaaagccaag
aggatcatgaaaggagctcaggccaaaggaaagaagccgctgttcgtgcagctcgtgctg
gataatatttggagcttatatgatgcagtcgtcatcaggagagacaaggagaaggtggag
aaggtggtgacatcactcggggtaaagctgatggccagagatttgcgtcactccgacccc
aaagtcctcctgtcggccatctgcagccagtggttacccgtttcccaggccgtcctttcc
atggtgtgtgagaagctccccagtccgttagagatggcggctgagagggtggagaagctg
atgagcgtgggagcacgccgctttgactcgctgcccgaacagacgcaacacctgaaaaca
gcattcctgcagtgttcgagtgaggaaaacgctccggtcatcgtcttcgtgtccaagatg
tttgccgtggacgccaaggcccttcctcagcacagacagaggcctctgactcaggaggag
atcgccgagcgccgggagcaggcgagacagcgacacgctgacaggatggcagcagagagc
caccgagagcccccccactctgagagcgtgtcacctgccggactctgcacagcgaacatg
gagaacctgacgctgaaagactcgaagccagaggaggaagaggagccgaaggagaccttc
gtggcgtttgctcgcgtctacagcggggtggtcaggagaggacagagagtattcgtgctg
ggaccgaagtacgaccccgcccagggcctgagcacgctgccggagggatgcagcgcttcg
gacgacgtctctgagattcctcacctgtcctgttgctccatggaaaacctctacctgctg
atgggcagagagctggaagagctgcaggaagtccccgcaggaaatgtcctcggtatcgga
gggcttgaggagtacgtcttgaagtcggccacgctgtcaaccgcacccgcctgtccacca
tttaccccgctcaactttgaggccacacccattgtccgggttgccatagagcccaaacat
ccaagcgagatgccaaagctggtgcgtgggatgcgtttgttgaaccaggccgatccctgt
gccgaggttctgatccaggaaaccggagaacacgttctggtcactgctggtgaggttcat
ctgcagcgctgcctggacgacctgagagaccggtttgctaaaatcgagatcagcgcgtct
gagcccatcatcccgttcagagagacggtggttcgtcctcccaaagtggatatggtgaac
gaggagctgggcaagcagcagaaagtcgccatcattcatcaggtgaaagaagaggcctct
cagggtcgatcatccgacaccctacacctggactccagcggcctcgttaccctcaccacc
cccaacaggctggccacggttggcatcagggcgatacctctgccacaggaggtgacgcgt
ctgctggagagcagctcggaggtgattcggactctggagcaggtaaacatgtcactgagg
gaggggaagagtctggacatcagcgtcaggaccctggaggccatttctgacctgaaggcc
cagctggagagcctgctgcaggggaggaagtggaggaacgccgtggaacatatctgggcc
ttcgggcctcgcaggtacggtccgaacatcctgctgaacagcgtggagggataccagcgg
ccgtcggtgtggcagtgtctgagccgcggggacaaagccagcgaagctacggcgctgcga
gattttgacaacagtatcatcagcggcttccagctggcggctctgtcggggcccatgtgc
gaggagcccctgatgggagtttgcttctctgtggagaggtgggacgtccagtccaccgcc
ccgccgcaacaccaggactccgtagaagacgactccacgggccacgaggctacggcggaa
agtaacatggaaggaagcagtgagacgtctgcacggggggagggcacggcggcggggccg
agccacgccggacgcaggccggaggtcgccgcctcttccgactgctacggcccggtctct
ggtcagctgatcgctgccgtgaaggaggcctgccggcacgccttccaggctcagccgcag
aggctcatggccgccatgtacacctgtgagatcatggccaccgcagacgtgctgggtcgt
gtttacggggtactcgggaagcgagaaggtcgagtcctccacgaagagatgaaggaaggg
acggacatgttcatcatcaaggccgtggtgcccgtggctgagagctttgggtttgcagac
gagatccgcaagaggacgagcggattggccagtccgcagctggtgttcagtcactgggag
gtgatcagcagcgatccttactgggttcccaccactgaggaagaatacctgcacttcggc
gagaaggccgactctgaaaaccaggccttgaaatacatgaatgatgtccgccgccgcaaa
gggctctacgtggaggagaagatagtggagcacgccgagaaacagaggacgctcggcaag
aacaagtag
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integrated database retrieval system
