Oreochromis aureus (blue tilapia): 116319171
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Entry
116319171 CDS
T07295
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
oau03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116319171
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116319171
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oau01009
]
116319171
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116319171
03036 Chromosome and associated proteins [BR:
oau03036
]
116319171
Protein phosphatases and associated proteins [BR:
oau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116319171
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116319171
SWI/SNF complex
116319171
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116319171
PBAF complex
116319171
SWI/SNF complex
116319171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
116319171
NCBI-ProteinID:
XP_031594278
Ensembl:
ENSOABG00000007341
UniProt:
A0A668SK94
LinkDB
All DBs
Position
LG7:55541691..55555729
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFDGNDEKYKAVSINTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQIEALVPVRLDMEIDG
QKLRDTFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSLLEDQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagctctcagtaaaacgtttggccagaagccggtaaaatttcagctcgaacaa
gatggagacttttacatggtggggtcggaggttggaaactatctgcggatgttcagaggc
tccctttataaaagatatccatctttatggaggaggctggcctctgtggaggagagaaag
aaaattgtagcatcgtcacatgccaccagtgttactctgctgaaggcttcagaatgtgaa
gagatctttgatggaaatgatgagaaatacaaagcagtgtctatcaacacagagcctcct
gcttacctcagggagcaaaaggcaaagagaagtagtcagtgggttcccacactgcccaac
agctctcaccatctggatgctgtgccttgctccaccaccatcaaccggaaccggatgggc
cgtgacaagaagaggaccttccctctttgttttgatgaccacgaccctgcagtaatccat
gagaatgcagcccagatagaggcactggtccctgttcgtctagacatggagatagatggg
cagaaactacgggataccttcacatggaatatgaatgaaaaacttatgaccccagagatg
tttgctgagattttgtgtgatgacctcgacttgaatcctctggcttttgtcccagccatc
gcatcagctattcgtcagcagattgagtcttaccccactgacagtctcttagaagaccag
gcggaccagagagtcatcatcaagctgaacatccatgtagggaacatctctctggtggac
cagtttgagtgggacatgtcagagagggagaactctccagagtcatttgcattgaagctg
tgctctgagctgggtctcggcggggagtttgtcaccactattgcctacagcatccgtggt
cagctcagctggcaccagaggacctatgctttcagtgagaacccactacccacagtagag
attgccattcgcaacacaggtgatgcagaccagtggtgccccctgttggagaccctgaca
gatgctgaaatggagaagaagatcagagaccaagacagaaacacaaggcgtatgagacga
ctggccaacaccgccccctcttggtag
DBGET
integrated database retrieval system
