Oreochromis aureus (blue tilapia): 116319180
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Entry
116319180 CDS
T07295
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116319180 (zc3h13)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
116319180 (zc3h13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
116319180
NCBI-ProteinID:
XP_039462821
UniProt:
A0AAZ1XYD8
LinkDB
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Position
LG23
Genome browser
AA seq
1852 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSSSTTTSSSTNPAAPSRRPSVFERLGPSTGSNAADSHCR
NWLKTGNCSYGNTCRYTHGTQPRGKGFSFSRSTERPTGDLRERMKNKRQDVEAENLKRDL
DEPTSPTVRQRESSRGRHREKEDIKITKERTPGSEEEPTEWETNREDSDIGDYDYELSLE
MKRQKIQRELMKLEQENLEKREEIVIKKDETPTKSRTTALPKASPEQLSSKDSPSSRKSS
GSPKHKRGNKGLGSGKKEKKASVSSPVSETTRSSKGSHSKKKGPRTPSPLPPVPLDLPVV
GKKHKGKHKNKEKSDEKQKEGKDRGRDAEKHKEKKEKRRDRSDSSHKAKRSVTSEERSGS
VSSPSRGVSPSARKKSTSPKASSHKASILASPPHRSPSPPRHQRSPTPPRHRSPSSHSGS
SAHRHSPSPRRRRSSSPLYHRSATAQASVSSPQSSRRSRSPPASHDTSSPHRRSDRLSPS
RRHSRGRERSRGDRERSPPIQDRRHERRDDSHSKREKDSIRDDRDYDSEQISRDARDDRD
ARDARDRRDARDRGREPTRDSRDSRDVKDLRESRVETRSSRDREREREKDREKEREREKE
RDRERERIDAHRKEDLIQDDRSYGRGHGRDDGGRGEARTESRTDRADRNGRGRGRANDIP
EKGSNRNSRGSQLESSHDNWESRSSAVRERSVERSTDRSANERSSDRVSDRDRYECERRG
EQTRDPSYDRRGGHGERDRRDNRERDQRAASPSRHQGRLEESERDERRDERRTERAEDRR
DDRTRERERERDREREREREREKEKEREREREREKEREKEREAERERERARERERERERE
REREREREREREERERERERKEREREREQRERERLREWEVRERGREERRERRDDVRDERP
VRDSRDDRKLSRKRPRMDSSQSPRSSPKRTTLDLSPADSDDYNSAEDKSERPIGRGQAKL
HPQPLLPSPVCLPPSDNGDKHRLLSQVVRPQEPLLRSPPRTAASDEKPTHWKDEDRRAVG
DKREARGRHEDLEPRGERSRGGDRRGEHLSDAPSDLRSRGRDPTPPPPPPLAAASEDRET
GGSQLHEEGKKKTKSQRKGLKKGRKDEETVAASALAAAGDRFNPEPPSGASADVPPPLHS
PRKGAKKKALERKRKRSRGGESEASEEETSTYLPHSKRKRGPRTPPPSMRPDQRGAGGNT
ERSPLSKMDNFSDWSDEEVTDRGGSLETLAPLVSAERAPPEPLRRGGGPRMGRGNPPPIA
PLLSQDPPMLLQTLPLQPLMSQPLLRKPPPEQTRSSSMGSNQSRTSSRRLRSPSNESAHR
EDPQGPRSRRGRLQGTNSRDRERERERERERERERDRERPAANDPPCSERKSRIDQLRRG
EPSRSTSSDRQDSRSHSSRRSSPDSERQARSRSRAGSYDSREREREREPFERERERERER
ERKDIRPQQQQQQPLLLQQQLQQPPSREWEAEWPSRGREPLLMRPGREPLLRERDIRDRE
RLLPEGLIQQHERERERERERERDIRGDRGVDRERERLMMMDITPHGDPRAPVRGDIRGD
LRGDLRGDMMRQDRMDYEPMLPREAFSPPEPEKPSNSPHLTGDQREVEKADSIDGDDDGK
EDDGQSVASVGEEYEPISDDELDEILADSQKKEDQQEEEKITGPLDVIDVDWSSLMPKQK
QEPRAAGAALLRFTPGAVLLRAGISKRLAGPELLEQVKEVCKSELDDPKDADKLFEHDLG
ALNMAALNRRVERAGLLRNLGPCCKALCARRDFAIRRQLLKNEKGLSKHDPTTPVVDNEL
LQMSMRLFRRTVAGQASAPERSDSGSAPAAEVTEAGSGSSKLSAAQPEVCVS
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtaacagtggaaaattcaaaaaccatatctgacagcagc
agcagcagcagcaccacaaccagcagcagcaccaaccccgccgctccgtcccgcaggcca
agtgtgtttgaaagacttggacccagcactgggagtaatgctgctgatagtcactgtaga
aattggctgaagactgggaattgcagttacggcaacacttgtcgctacacacatggaact
cagccacgaggcaaaggatttagctttagccggtcaaccgagaggcccacaggtgatctg
cgggagaggatgaaaaataaaagacaggatgttgaagcagaaaacctgaaacgagaccta
gatgagcccacgtcccccacagtaagacagagagagtcctccagaggccgacacagagag
aaggaggatataaagataacgaaggagcgtaccccaggcagtgaagaagaacccacagag
tgggaaaccaatcgtgaagactctgatattggtgattacgactatgagctttccctagag
atgaagcgtcagaagattcagcgtgaactaatgaaattagagcaggaaaacttggagaag
agagaagaaattgtcatcaagaaagacgagactccgacgaaatccagaaccacagccttg
ccaaaggcttcccctgagcagttaagctccaaagattcaccctcatccagaaagtccagt
ggctcgccaaaacataaacggggaaacaaagggctgggctcggggaagaaagaaaagaag
gcatcagtatcctcacctgtttcagaaactaccaggtcttcgaaaggaagccacagcaag
aagaaagggccccgtacccccagtccccttccaccggtccctctggacctgcccgtggtc
gggaaaaaacacaaaggcaagcacaaaaataaggagaagtctgacgagaagcagaaggag
ggtaaagatcgtggacgagatgcagaaaaacacaaagagaagaaggaaaaacgcagggat
agatcagacagttcccacaaggccaagaggtctgtgacatcagaggagcgttctggtagc
gtgtcatctccctccaggggtgtgtcgccctcagccaggaagaaatctacctctcctaaa
gcttcctcccataaggcttctatcttggcatcccctcctcacaggtctccttctcctccg
cgccaccaacgcagccccactcctccccgtcaccgctcgccttcgtcccactccggttcc
tctgcccaccggcactctccctctcctcgacgccgtcgttcttcttcccccctctaccac
agaagcgccaccgctcaggcatccgtctcctcacctcagagttcccggcgctctcgttcg
cctcctgcttctcatgacacatcgtcaccccatcggcggtctgacagattgagccccagc
cggcgccactccaggggccgcgagaggagtcgtggcgacagagagaggagtcctcccatc
caggaccgcagacatgagcgcagagatgatagtcacagcaaacgagagaaggacagcatc
cgtgacgaccgggactatgactctgaacagatctcccgggatgcccgtgacgacagggac
gcccgagatgctcgtgaccgacgggacgctcgtgaccgaggaagggaaccaactcgagat
tctcgtgatagcagggatgtgaaggacttgagagagagtagggtggagacccgctccagt
cgagaccgcgaacgggagcgagagaaggaccgggaaaaggagagggagcgagaaaaggaa
agagacagagagagggagaggattgatgcacacaggaaggaggacctgattcaggatgac
aggagctacgggagagggcatggacgtgacgatggaggcagaggagaagcaaggactgag
agcaggacggacagagctgataggaatggacgaggtagaggacgcgctaatgacatacct
gagaaaggctccaacagaaactctcggggttcccaactggaaagcagccatgacaactgg
gaatcgcggagcagtgccgttcgtgaacggagtgtggagaggagcacagatcgcagtgcc
aatgaaagaagctcggacagggtgtcagaccgagatcgctacgagtgtgagagaagaggg
gagcagaccagagacccctcgtatgacaggagaggaggacatggagagcgggatcgcaga
gacaaccgagaaagagaccaaagggcagcttctccaagcagacaccaggggaggctggag
gagtctgagagggacgagaggagggacgagcgcaggactgagagagctgaagacaggaga
gacgacaggacccgcgagcgagagcgggaacgggacagggagcgcgagagggaacgggag
agagagaaagagaaggagagagagcgggagagagagagggaaaaggaacgggagaaggag
agggaggcggagagagagcgggagcgggccagggagagagaacgagagcgagaaagggag
agggagagagagcgagagagggaaagggagcgcgaggagcgggagagagagagggagagg
aaagagagagaacgggagagagaacagcgcgagcgggagagactgcgggaatgggaggtc
cgagagaggggacgggaggagaggcgggagaggagagacgacgtcagggatgaacggccg
gttcgagacagccgggacgatcgcaagttgagtcgtaagaggcccaggatggatagcagc
cagagtccccgatcctctcctaagcgaacgacactggacctcagtccagcagacagcgac
gactacaatagtgccgaagacaaaagtgagcgcccgattggccgagggcaggccaagctc
caccctcagcccctcctccccagcccagtgtgtctgcctccatctgacaatggggacaag
catcgtctgctgagccaggtggtacggccccaggagccgctgttacgatcgccgccgagg
actgctgcatccgatgaaaagcccactcactggaaggatgaggaccgcagggcagtcggg
gacaaaagggaagcacgcggtcgccatgaggacctggagcctcgtggggaacgaagcaga
gggggcgacaggcgtggagagcacctctcagacgcgccttctgacttgcgtagcagaggc
agagatcctacaccacctccacctccaccccttgccgctgccagtgaagacagagagacc
ggtggttctcagctgcatgaggaagggaaaaagaagacaaagtcacagaggaagggcttg
aagaagggtcgcaaagacgaagagactgtcgctgccagcgccctggctgctgcaggggac
cgattcaaccccgagcccccatctggggcttctgcagacgtgcctccacccttacattct
cccaggaaaggggcaaagaagaaagctctagagcgaaagaggaagcgatcgcgagggggg
gagtctgaagcatccgaggaggaaacttcaacctacctgccacacagtaagaggaagagg
ggtcctcggacaccgccgccttcaatgagacctgatcagcgaggtgctggagggaataca
gagcgctctcctctttcgaaaatggacaatttcagtgactggtcagatgaggaggtgaca
gaccggggaggctcgctggaaacacttgctcctttggtttctgctgagagggctcctcct
gaacctctcaggagaggtggaggccccaggatgggccggggtaatccaccacccattgca
cctttgctctcccaggatcctccaatgctgctgcagactttgcctctgcagcctctcatg
tcccaaccgctgctccgcaaacccccaccagagcagacgcgcagcagcagcatggggagc
aaccagagtcggacatcatctcgacgcctacgatcaccctctaacgagtcagcccacaga
gaagatccccagggcccacgatcgcgccggggcagacttcaaggcaccaactctcgggac
cgggaaagagagcgggagcgagagagagaacgggagagggagcgagaccgcgagaggccg
gcagcgaatgaccctccatgctctgagaggaagtcccggattgatcagctgaggagagga
gagcccagccgtagcacctcatcagaccggcaggattctcgcagccacagctcccgacgc
agctctcctgattctgagaggcaggccaggtccaggtcccgtgccggctcctacgacagt
cgagaacgagagagagaaagggagccatttgaacgggagagggaaagagagagggagaga
gaacgcaaggacatccgacctcagcagcaacagcagcagcctctgcttctccaacagcaa
ctacaacaaccaccatcaagagaatgggaggctgaatggccaagccgggggcgggagccc
ctgctgatgcgtcctggtcgcgaacctctccttagggagcgggacatccgggacagggaa
cgcttactccccgaaggactcatccagcagcatgaacgggagcgggaaagggagagagaa
cgggagagagacattcgaggtgaccgaggtgttgaccgagagagggagaggttgatgatg
atggatatcacgccccacggggatcccagggctccagtacgaggggacatcagaggagac
ctgcgaggagacctgcgaggagacatgatgagacaagacaggatggattacgagcctatg
ctgcccagagaagctttcagtcctccagagcccgagaaaccgagcaacagtccccatcta
actggagatcaacgggaggtggagaaggcagacagcatcgatggagacgatgatgggaag
gaagatgatggccagtctgtggcatctgttggcgaggagtacgaaccgatcagcgatgat
gagctggatgaaattctggctgacagccagaaaaaagaagatcagcaagaagaagagaaa
atcacaggtcctctggatgtgatagatgtggactggtccagcctgatgcccaaacagaaa
caggaaccgcgggcagcgggggcagccttgctccgcttcaccccaggggcagtgcttctt
agggcaggcatatccaagagacttgctggcccagaactcctggaacaagtcaaagaagtg
tgcaagtctgagctggacgatcctaaagatgctgacaagctctttgagcatgacctggga
gccttgaatatggcagctctgaacaggcgggtggagagggcgggtttattgagaaatctg
gggccgtgctgcaaggccctgtgtgctcgcagggacttcgccatccgccggcaactgttg
aaaaacgaaaagggtctatccaagcatgaccccaccacacccgtggtagacaatgagctc
ctgcagatgagcatgcgtctcttcagaaggaccgtggccggccaggcatcggccccggaa
aggtcggacagtgggtcggcaccagcagctgaagttactgaagctggtagtggtagtagt
aagctcagcgcagcacagcctgaggtctgtgtgtcctga
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