Oreochromis aureus (blue tilapia): 116319215
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Entry
116319215 CDS
T07295
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116319215
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
116319215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
116319215
NCBI-ProteinID:
XP_031594341
Ensembl:
ENSOABG00000013528
LinkDB
All DBs
Position
LG23:12115431..12134981
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AA seq
965 aa
AA seq
DB search
MGQKDHVEAGAGHILDLGLDLEYLHVAGGDRQAGGADGPPAMEEQGESTAGSPPLTVLEE
NSGSDAEGESALTSSSTLAPGTDSDGGDGGLTHSKNTHQPLCRTQCVDLGTEGPPEPPSE
LLAELECDAHAQSTLDSPCEHLPEPPPSLSASEPGYEAGGKEYQAKLEFALKLGYSEETV
RLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGLLASTSSSSSSSSSCGCSDLLEGQRS
DSPCHSDSLCDQDNLRPVVIDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHQDITVFVP
AWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGII
VSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVMPE
QKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVVSKNQGDAGLVKSHS
VPAGSIDAKKGAPKRQSDPSIRALSYSDAEEKLLAKGRVEVQKNTVCGSSTSSSSSTSGS
CGGSISMSPAPGGPPSTLGLPQEQQARAVMPHGHLPAPSHDLYPHCESPDLSYYSVTRAY
SGLSLSSRRSPDCRFPNDTDLRLGSAGSECSSESSVSCGSSCDSYGERQCPGCPPDPLLE
DAVHFPNPHGRLYSHHATSSHELCGLHPAEYTNIQHSHTPSTGLHPYHLSAARGQSCAHD
PPPLEAPPKRPLYPLPPHLQHQPLTARSSCPGDYHSLPQSNPAPPGSPLGRCLAPTRAES
VSDSHLYEHLSTSHHHHRPKALPSWDKYYRQPPLPPSRYEPPTYQSLPDTRQSSWHTPPW
AQDGYGQHHSSHPALHPSPTHYLSHPPPPAHSPCPPHPSSTPLPPYPPHSSHLTVPSHAS
PSYMSQHPESPAHSRYGDAREKVYINLCNIFPSDLVSRVMARSPHITDPQQLAAAILAEK
AQTGY
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaggaccatgtggaggcaggtgcaggccatatcctcgacctggggctggat
ttggagtatctacacgtagcggggggtgaccggcaggctggcggcgctgacgggccccct
gctatggaggagcagggggagagcaccgctggctcccctccactgaccgtcctagaggaa
aacagtgggtccgacgcagagggcgagtcagcgttgacctccagctccaccctcgctcca
ggtaccgactcggatggaggagacggagggttgactcacagtaagaacacccaccagccg
ctctgccggacccagtgtgtggacttaggcaccgaaggccctcccgagcccccatctgaa
cttctagcagagcttgaatgtgacgcccatgcccagtccacgctcgactccccgtgcgag
cacctgcctgaacctccacccagtctgtctgcttcagagcctggctatgaggctggtggg
aaagagtaccaggctaagctagagtttgccctcaaactcggctactctgaggagacggtg
cgactggtgctgtctaagctcggccctgacaccctaatcaatgacatactgggagagctg
gtcaagctgggcaccaagtcagacagtgagcagccggctggattattagcctctacctca
tcctcttcatcttcctcatcctcctgtggttgttctgatttgctggaaggccagaggtca
gactcaccctgtcattcagactctttgtgtgaccaggacaacctgcggccagtcgtgata
gatggcagcaatgtagccatgagccatgggaacaaggaagtgttttcctgtcagggcatc
cagctggctgtagattggttcctcgagcgcggccatcaagacatcacagtttttgtgcct
gcgtggcggaaagagcagtcccgacccgatgcccctataacagatcaggagatcttacgt
cgcctagagaaggaaaaaatcctggtgttcacgccttcacggcgtgtccaaggtcgacgt
gtggtctgctatgacgaccgtttcattgtcaagctggcctatgagtcagatggcatcatc
gtctccaacgacaactacagagacctggctaacgagaagcccgagtggaagaagttcata
gatgagcggcttctcatgtattcctttgtcaatgataaattcatgccgccagatgaccct
cttggtcgtcacggccccagcttagacaacttcctgagaaaaaggcccgtcatgcctgag
cagaagaagcagccttgtccatacggaaagaagtgtacttacggtcacaaatgtaagtac
taccacccggagcgaggcgcccaacctcagcgtgccgtggctgatgagctgcgtgccagc
gccaagacctgcgtcgtctcaaagaaccagggcgacgccgggctggtgaagagccacagc
gtgccagctggcagcatcgacgccaagaaaggcgcaccgaaaaggcagtcggaccccagc
atccgagctctgtcatacagcgacgccgaagagaagctgctggccaaagggagggtggag
gtgcagaagaatactgtgtgtggcagcagcaccagcagtagcagctccactagcggtagc
tgcggtgggagtataagcatgtccccggccccaggaggcccaccatccactcttggcctc
ccacaagagcagcaagcgagagcagtgatgcctcacggtcacttaccagcccccagccat
gacctttaccctcactgtgagtctccagacttaagctactattcagtaacacgtgcttac
tcaggcctgagcctctcctccagacggagcccagactgtcgcttccccaacgacacagac
ctgcggctgggctcagccggctctgagtgcagcagcgaaagcagcgtcagttgcggcagc
agctgcgactcgtacggcgagaggcagtgtcccggatgccccccggaccccttactggaa
gacgctgtccattttcctaatccccacggccgactgtactcccatcatgccacatctagc
catgaactttgtggcctgcatcctgccgaatacacaaacattcagcacagccacacgccc
agcacaggactacacccttaccacctgagcgccgcacgcgggcagagctgcgctcatgat
ccgcccccactagaggctcccccaaagcggcccctctaccccctgccccctcatctccag
caccaaccgctgactgcgcggtccagctgcccaggcgactaccactctctgccgcagtcc
aaccccgcaccccctggctcaccccttggccgctgcctggccccaacgcgagcagaaagt
gtgtccgactcacacctgtacgaacacctctccacatcacaccatcaccaccgaccaaaa
gccctgcccagctgggacaagtactacaggcagccgccgctgccgccatccagatacgag
ccgcctacctaccaaagcctgccagacacacggcagtcgtcctggcacactcctccatgg
gcgcaagacggctacggccagcatcactcctctcacccagctctccacccatccccaact
cattacctcagccacccaccgcccccagcccactctccttgcccgcctcatccatccagc
acgcctctcccgccatacccacctcacagctctcaccttaccgtgccctcccatgcctct
ccctcctacatgtcacagcacccagaatcccccgcgcacagtcgctacggcgatgcgagg
gagaaagtgtacataaacctgtgcaacatcttcccctcagacctggtaagccgggttatg
gccagaagcccccacatcacagacccccagcagctggcagctgccatccttgcagaaaaa
gcccaaacaggctactga
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