Oreochromis aureus (blue tilapia): 116319313
Help
Entry
116319313 CDS
T07295
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116319313 (sox21b)
Transcription factors [BR:
oau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116319313 (sox21b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116319313
NCBI-ProteinID:
XP_031594465
Ensembl:
ENSOABG00000000780
UniProt:
A0AAZ1XXM1
LinkDB
All DBs
Position
LG16:17777089..17779340
Genome browser
AA seq
248 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVNGLSTGALSESV
IGNPDKAAAAAAAAAARVFFNPSMSANPYSFFDLGSKMTELSPPSFPYASPLGYPPGGAT
AFTGTGSVGGGTHTHTHSHPSPGNPGYMIPCNCTAWPSAGLQPPLAYILLPGMGKPQLEP
YPAYAAAL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccgatggatcacgttaaacgtccgatgaatgctttcatggtttggtccaga
gcccagcgcagaaaaatggctcaggagaaccctaaaatgcacaactccgagatcagcaag
agactgggagcggagtggaaacttctcaccgagtctgagaaaaggccattcatcgacgaa
gccaaacggctgagagcgatgcacatgaaggaacacccagactataaatacagaccgagg
cggaagcccaagactctgatgaaaaaagataagttttctttccccgtgccctacaatctc
ggggagcacgacgcactcaaagttaacgggctttccactggagcactttccgagtctgtc
attgggaaccccgataaggcggcagcagctgctgcggctgcggcggccagggtattcttc
aacccctccatgtccgcgaacccctactcatttttcgacctgggatccaagatgaccgag
ctttccccaccttcgtttccgtacgcttctcctttgggctacccgccgggaggcgctacg
gctttcaccgggactggcagtgtaggtggcgggacgcacacccacactcactcacatccg
tccccgggaaacccaggctacatgatcccgtgtaactgtacggcctggccctcagcagga
ctccaaccacccttagcatacattctgctccccgggatgggaaaacctcaacttgaaccg
taccctgcatatgctgcggcattatga
DBGET
integrated database retrieval system